Bestatin (hydrochloride)_NCI-H23 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bestatin (hydrochloride) perturbation in NCI-H23 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bestatin (hydrochloride)_NCI-H23 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.175659
TFPI2 tissue factor pathway inhibitor 2 0.138525
TXNRD1 thioredoxin reductase 1 0.104367
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0605497
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0490513
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0470007
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0423183
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0421848
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0355498
CSDE1 cold shock domain containing E1, RNA-binding 0.0340143
TRIP12 thyroid hormone receptor interactor 12 0.0331293
PLEC plectin 0.0323428
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0301043
MARCHF4 membrane associated ring-CH-type finger 4 0.0299779
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0289919
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.027124
ELL2 elongation factor, RNA polymerase II, 2 0.0269244
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0265874
CTTNBP2NL CTTNBP2 N-terminal like 0.026393
PCBP2 poly(rC) binding protein 2 0.025035
SMAD3 SMAD family member 3 0.0246886
BZW1 basic leucine zipper and W2 domains 1 0.0244123
ANXA5 annexin A5 0.0242634
MAGEA4 melanoma antigen family A4 0.0239533
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0237013
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.0236802
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0230966
RB1CC1 RB1-inducible coiled-coil 1 0.0227589
PTPN11 protein tyrosine phosphatase, non-receptor type 11 0.0227316
TPM3 tropomyosin 3 0.0223896
ANO6 anoctamin 6 0.0222706
CLTC clathrin, heavy chain (Hc) 0.0218139
SAMD4A sterile alpha motif domain containing 4A 0.0212922
GNAI3 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 0.0209004
RUSC2 RUN and SH3 domain containing 2 0.0208286
POLR2B polymerase (RNA) II (DNA directed) polypeptide B, 140kDa 0.0204175
PGK1 phosphoglycerate kinase 1 0.0202368
OGA O-GlcNAcase 0.0201085
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0199983
MYPN myopalladin 0.0199896
PKM pyruvate kinase, muscle 0.0198912
ACTR2 ARP2 actin-related protein 2 homolog (yeast) 0.0197346
KRT18 keratin 18, type I 0.0196762
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0195527
TM4SF1 transmembrane 4 L six family member 1 0.0194302
SFPQ splicing factor proline/glutamine-rich 0.0193421
IPO7 importin 7 0.0191473
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0189818
TJP1 tight junction protein 1 0.0189092
PPM1L protein phosphatase, Mg2+/Mn2+ dependent, 1L 0.0187638
NCAPD2 non-SMC condensin I complex, subunit D2 0.0179969
DST dystonin 0.0179542
TUBA1C tubulin, alpha 1c 0.0177433
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0175733
UBC ubiquitin C 0.0175516
TRIO trio Rho guanine nucleotide exchange factor 0.0173614
RASAL2 RAS protein activator like 2 0.0171912
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.0169332
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) 0.0167166
EIF4B eukaryotic translation initiation factor 4B 0.016701
EEF2 eukaryotic translation elongation factor 2 0.016691
CLDN1 claudin 1 0.0166471
MYL12B myosin, light chain 12B, regulatory 0.0165811
STK4 serine/threonine kinase 4 0.0164442
IPO5 importin 5 0.0162961
MSH6 mutS homolog 6 0.0161823
LDHA lactate dehydrogenase A 0.0160414
USP9X ubiquitin specific peptidase 9, X-linked 0.0160057
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0159829
MCL1 myeloid cell leukemia 1 0.0158443
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0158356
FKBP4 FK506 binding protein 4, 59kDa 0.0156599
CUL3 cullin 3 0.0155723
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 0.0154453
SEPTIN9 septin 9 0.0152773
DOCK3 dedicator of cytokinesis 3 0.0152248
CCND1 cyclin D1 0.0152031
ARF3 ADP-ribosylation factor 3 0.0149929
ATP5F1A ATP synthase F1 subunit alpha 0.0148539
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 0.0146427
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0145911
CAPRIN2 caprin family member 2 0.0145884
AHNAK AHNAK nucleoprotein 0.0145584
SQSTM1 sequestosome 1 0.014553
CAPRIN1 cell cycle associated protein 1 0.0144228
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0143934
ADAM17 ADAM metallopeptidase domain 17 0.0143208
CCT4 chaperonin containing TCP1, subunit 4 (delta) 0.0142774
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0140982
PTGES3 prostaglandin E synthase 3 (cytosolic) 0.013918
EZR ezrin 0.01375
HSPH1 heat shock 105kDa/110kDa protein 1 0.0137408
SSR1 signal sequence receptor, alpha 0.0136936
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0136885
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0135654
PCNX1 pecanex 1 0.0134819
LARP4 La ribonucleoprotein domain family, member 4 0.0134216
ZYX zyxin 0.0133964
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0133794
MACF1 microtubule-actin crosslinking factor 1 0.0133709

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.16368
AKAP12 A kinase (PRKA) anchor protein 12 -0.160847
TMSB10 thymosin beta 10 -0.0919356
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0732148
PDE4D phosphodiesterase 4D, cAMP-specific -0.0492784
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0485331
RPS3 ribosomal protein S3 -0.048438
RPS27 ribosomal protein S27 -0.0452735
AFF3 AF4/FMR2 family, member 3 -0.043498
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0432585
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0421626
RPS6 ribosomal protein S6 -0.0419438
RPS21 ribosomal protein S21 -0.0408059
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0407729
RPL37 ribosomal protein L37 -0.0401708
MT2A metallothionein 2A -0.0385283
RPS29 ribosomal protein S29 -0.0385211
RAD51B RAD51 paralog B -0.0380984
PTMA prothymosin, alpha -0.0379588
RPS8 ribosomal protein S8 -0.0379104
RPS12 ribosomal protein S12 -0.0369347
RPL34 ribosomal protein L34 -0.0361312
LOC102724023 ES1 protein homolog, mitochondrial -0.0348456
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0343963
RPS19 ribosomal protein S19 -0.0339095
RPL35A ribosomal protein L35a -0.0332186
KDM2A lysine (K)-specific demethylase 2A -0.0326582
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.031978
RPL37A ribosomal protein L37a -0.0315768
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0309768
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0305727
VIM vimentin -0.0294185
THSD4 thrombospondin, type I, domain containing 4 -0.0291534
RPL23 ribosomal protein L23 -0.0286784
RPL11 ribosomal protein L11 -0.0284792
RPLP1 ribosomal protein, large, P1 -0.0276458
RPL36 ribosomal protein L36 -0.0274841
BASP1 brain abundant, membrane attached signal protein 1 -0.0272577
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0271959
TAS2R14 taste receptor, type 2, member 14 -0.0268501
SHANK2 SH3 and multiple ankyrin repeat domains 2 -0.0261212
WSB1 WD repeat and SOCS box containing 1 -0.0260316
RPL26 ribosomal protein L26 -0.0251017
PDE10A phosphodiesterase 10A -0.0241515
PFN1 profilin 1 -0.0236853
PHF21A PHD finger protein 21A -0.0233728
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0232817
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0231671
RBM39 RNA binding motif protein 39 -0.0231525
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.022726
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0223702
ZMYND8 zinc finger, MYND-type containing 8 -0.0223589
RPL8 ribosomal protein L8 -0.0222367
VMP1 vacuole membrane protein 1 -0.0220814
YBX3 Y box binding protein 3 -0.0217909
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0216201
CUX1 cut-like homeobox 1 -0.0211885
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0210606
RPS25 ribosomal protein S25 -0.0210592
RPL27 ribosomal protein L27 -0.0206886
RPS14 ribosomal protein S14 -0.0205652
HLA-B major histocompatibility complex, class I, B -0.0205271
DENND5B DENN/MADD domain containing 5B -0.0203615
FBXO11 F-box protein 11 -0.0201811
RPL35 ribosomal protein L35 -0.02017
RPLP2 ribosomal protein, large, P2 -0.0199636
WWOX WW domain containing oxidoreductase -0.0196337
ZNF638 zinc finger protein 638 -0.0195317
AP1S3 adaptor-related protein complex 1, sigma 3 subunit -0.0192878
RPS24 ribosomal protein S24 -0.0192717
ZBTB20 zinc finger and BTB domain containing 20 -0.0191225
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0186914
RPS10 ribosomal protein S10 -0.0185262
RPL28 ribosomal protein L28 -0.0185015
EHBP1 EH domain binding protein 1 -0.0183802
FTL ferritin, light polypeptide -0.0181657
RNF213 ring finger protein 213 -0.0181123
CHD1L chromodomain helicase DNA binding protein 1-like -0.0180968
S100A10 S100 calcium binding protein A10 -0.0177942
PHF20 PHD finger protein 20 -0.0176507
RYR3 ryanodine receptor 3 -0.0174669
KMT2A lysine (K)-specific methyltransferase 2A -0.0174247
ANKRD11 ankyrin repeat domain 11 -0.0172378
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0170466
TPM2 tropomyosin 2 (beta) -0.0170397
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0169969
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 -0.0168914
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0167932
EGFR epidermal growth factor receptor -0.0166969
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0165271
SSH2 slingshot protein phosphatase 2 -0.016474
DCUN1D4 DCN1, defective in cullin neddylation 1, domain containing 4 -0.0164469
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0161759
RPL19 ribosomal protein L19 -0.0161712
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) -0.0160634
SETD5 SET domain containing 5 -0.016022
RPS4X ribosomal protein S4, X-linked -0.0159745
GPATCH2L G patch domain containing 2-like -0.0158951
EPAS1 endothelial PAS domain protein 1 -0.0155768
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.015201