Bestatin (hydrochloride)_SW 1088 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bestatin (hydrochloride) perturbation in SW 1088 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bestatin (hydrochloride)_SW 1088 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
IGFBP3 insulin-like growth factor binding protein 3 0.128534
NRXN3 neurexin 3 0.101465
COL6A3 collagen, type VI, alpha 3 0.0943847
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0840672
NDRG1 N-myc downstream regulated 1 0.0762142
ELL2 elongation factor, RNA polymerase II, 2 0.0680856
MAP1B microtubule-associated protein 1B 0.0618873
GLIS3 GLIS family zinc finger 3 0.0511361
FTH1 ferritin, heavy polypeptide 1 0.0474735
ERRFI1 ERBB receptor feedback inhibitor 1 0.0464864
F3 coagulation factor III (thromboplastin, tissue factor) 0.0441219
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0440493
TENT5A terminal nucleotidyltransferase 5A 0.0425524
RNF145 ring finger protein 145 0.0422311
PTPN14 protein tyrosine phosphatase, non-receptor type 14 0.041196
LOX lysyl oxidase 0.0395524
GARS1 glycyl-tRNA synthetase 1 0.0389451
ZNF292 zinc finger protein 292 0.0378463
NAMPT nicotinamide phosphoribosyltransferase 0.037472
LOC112694756 uncharaterized LOC112694756 0.0369765
EFNA5 ephrin-A5 0.0359766
MARCHF7 membrane associated ring-CH-type finger 7 0.0359465
HOOK2 hook microtubule-tethering protein 2 0.0359259
TTC3 tetratricopeptide repeat domain 3 0.035166
MEF2A myocyte enhancer factor 2A 0.0344199
RICTOR RPTOR independent companion of MTOR, complex 2 0.0343565
DYNC1LI2 dynein, cytoplasmic 1, light intermediate chain 2 0.0342737
ARRDC3 arrestin domain containing 3 0.0339933
VEGFA vascular endothelial growth factor A 0.0336164
RAB31 RAB31, member RAS oncogene family 0.0334985
DLG1 discs, large homolog 1 (Drosophila) 0.033305
COG5 component of oligomeric golgi complex 5 0.0330539
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) 0.0320873
CANX calnexin 0.0317042
EGFR epidermal growth factor receptor 0.0315093
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A 0.0307016
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 0.0300008
TRA2A transformer 2 alpha homolog (Drosophila) 0.0296476
SUCO SUN domain containing ossification factor 0.0295314
CALR calreticulin 0.0293736
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0293167
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0290083
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0284777
HLA-C major histocompatibility complex, class I, C 0.0282902
XPO1 exportin 1 0.0281916
TMEM123 transmembrane protein 123 0.0276334
MYH9 myosin, heavy chain 9, non-muscle 0.0276267
WDFY3 WD repeat and FYVE domain containing 3 0.02751
SCAF11 SR-related CTD-associated factor 11 0.0273012
ANLN anillin, actin binding protein 0.0272629
BIRC6 baculoviral IAP repeat containing 6 0.0270531
YME1L1 YME1-like 1 ATPase 0.0269694
INSIG2 insulin induced gene 2 0.02657
PKM pyruvate kinase, muscle 0.0260277
EIF2AK1 eukaryotic translation initiation factor 2-alpha kinase 1 0.0258327
AKAP9 A kinase (PRKA) anchor protein 9 0.0257395
ACTR2 ARP2 actin-related protein 2 homolog (yeast) 0.0256957
STC2 stanniocalcin 2 0.0254216
AP3S1 adaptor-related protein complex 3, sigma 1 subunit 0.0253104
MAP2K1 mitogen-activated protein kinase kinase 1 0.0250332
SQSTM1 sequestosome 1 0.0249494
COPB2 coatomer protein complex, subunit beta 2 (beta prime) 0.0248956
NIPBL Nipped-B homolog (Drosophila) 0.0248811
MKI67 marker of proliferation Ki-67 0.0247432
ARF1 ADP-ribosylation factor 1 0.0238933
FLOT1 flotillin 1 0.0238081
PLEKHA5 pleckstrin homology domain containing, family A member 5 0.0237135
DIS3 DIS3 exosome endoribonuclease and 3'-5' exoribonuclease 0.0236117
SZT2 seizure threshold 2 homolog (mouse) 0.0235879
COG6 component of oligomeric golgi complex 6 0.0231793
AHR aryl hydrocarbon receptor 0.0231694
CMIP c-Maf inducing protein 0.0230634
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.023007
BHLHE40 basic helix-loop-helix family, member e40 0.0229107
RYBP RING1 and YY1 binding protein 0.0228235
WASF2 WAS protein family, member 2 0.0227991
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.0227625
MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 0.0227333
LGALS3 lectin, galactoside-binding, soluble, 3 0.0227072
MAP3K13 mitogen-activated protein kinase kinase kinase 13 0.0226426
MINDY2 MINDY lysine 48 deubiquitinase 2 0.0226361
ATP13A3 ATPase type 13A3 0.0226002
NCOR2 nuclear receptor corepressor 2 0.0225818
FAM120A family with sequence similarity 120A 0.0225765
SPDYA speedy/RINGO cell cycle regulator family member A 0.022527
MORF4L2 mortality factor 4 like 2 0.0221042
TGDS TDP-glucose 4,6-dehydratase 0.0220267
KMT2E lysine (K)-specific methyltransferase 2E 0.0220032
AP1G1 adaptor-related protein complex 1, gamma 1 subunit 0.021914
VMP1 vacuole membrane protein 1 0.0218844
CCNL1 cyclin L1 0.021807
TM4SF1 transmembrane 4 L six family member 1 0.021778
COL5A1 collagen, type V, alpha 1 0.0216945
HECTD4 HECT domain containing E3 ubiquitin protein ligase 4 0.0216017
PDGFC platelet derived growth factor C 0.021508
AP3B1 adaptor-related protein complex 3, beta 1 subunit 0.0214946
VEGFC vascular endothelial growth factor C 0.0214897
PICALM phosphatidylinositol binding clathrin assembly protein 0.0214352
UHMK1 U2AF homology motif (UHM) kinase 1 0.0213112
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 0.0212996

decreased expression

Symbol Name Standardized Value
TMSB10 thymosin beta 10 -0.183627
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.174161
MT2A metallothionein 2A -0.152506
UBC ubiquitin C -0.103233
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0951134
VIM vimentin -0.0892661
GRB10 growth factor receptor-bound protein 10 -0.0810024
SDC4 syndecan 4 -0.0791606
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0695947
ENO1 enolase 1, (alpha) -0.0695383
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.060654
TXNIP thioredoxin interacting protein -0.0591602
SPAG9 sperm associated antigen 9 -0.0567107
TRIO trio Rho guanine nucleotide exchange factor -0.0541267
WTAP Wilms tumor 1 associated protein -0.0510241
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) -0.0508472
EEF2 eukaryotic translation elongation factor 2 -0.0500977
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0497196
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0494113
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0489658
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0467956
ACTG1 actin gamma 1 -0.0467762
HS2ST1 heparan sulfate 2-O-sulfotransferase 1 -0.0466581
FTL ferritin, light polypeptide -0.0466103
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0465933
PTMA prothymosin, alpha -0.0465222
ANXA5 annexin A5 -0.0459187
RPL23 ribosomal protein L23 -0.0456814
FLNB filamin B, beta -0.0453014
FN1 fibronectin 1 -0.0451716
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0441911
CCNI cyclin I -0.0432496
ZNF207 zinc finger protein 207 -0.0428501
IL6 interleukin 6 -0.0428456
TPT1 tumor protein, translationally-controlled 1 -0.0423891
APLP2 amyloid beta (A4) precursor-like protein 2 -0.0423797
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.041563
RPS6 ribosomal protein S6 -0.0411333
POTEF POTE ankyrin domain family, member F -0.0407959
RPLP1 ribosomal protein, large, P1 -0.0406543
CDK6 cyclin-dependent kinase 6 -0.0405426
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0403716
WAC WW domain containing adaptor with coiled-coil -0.0400158
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 -0.0396523
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0388939
FLNA filamin A, alpha -0.0377628
SOD2 superoxide dismutase 2, mitochondrial -0.0367127
FNDC3B fibronectin type III domain containing 3B -0.0366439
SMAD3 SMAD family member 3 -0.036589
RTN4 reticulon 4 -0.0359267
RPS25 ribosomal protein S25 -0.0356993
RSAD2 radical S-adenosyl methionine domain containing 2 -0.0353367
RPS3 ribosomal protein S3 -0.0352835
PDIA3 protein disulfide isomerase family A, member 3 -0.034687
RPS11 ribosomal protein S11 -0.0342412
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0338758
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) -0.0336637
RPS8 ribosomal protein S8 -0.033464
NDUFA4 NDUFA4, mitochondrial complex associated -0.0329663
SRRM2 serine/arginine repetitive matrix 2 -0.0328142
SEC24D SEC24 family member D -0.0325359
RPS4X ribosomal protein S4, X-linked -0.032484
RPL37A ribosomal protein L37a -0.0323391
CALU calumenin -0.0320293
TOP1 topoisomerase (DNA) I -0.0315494
THOC2 THO complex 2 -0.0315295
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0311899
GLS2 glutaminase 2 (liver, mitochondrial) -0.0311774
KTN1 kinectin 1 (kinesin receptor) -0.0300456
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0299944
RIGI RNA sensor RIG-I -0.0297073
FAM3C family with sequence similarity 3, member C -0.0296824
LONP2 lon peptidase 2, peroxisomal -0.029554
ANKRD17 ankyrin repeat domain 17 -0.029422
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0286745
RPS27A ribosomal protein S27a -0.0282138
FMNL2 formin-like 2 -0.0278338
CCDC88A coiled-coil domain containing 88A -0.0275236
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0274028
LCOR ligand dependent nuclear receptor corepressor -0.0273168
COL4A2 collagen, type IV, alpha 2 -0.0269656
PAPSS2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 -0.0268688
SRPK2 SRSF protein kinase 2 -0.0268337
CD44 CD44 molecule (Indian blood group) -0.0268197
CWC27 CWC27 spliceosome-associated protein homolog (S. cerevisiae) -0.0268122
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.0266922
FBXO11 F-box protein 11 -0.0265581
AHNAK AHNAK nucleoprotein -0.0264738
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0261603
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0256148
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0255876
DEK DEK proto-oncogene -0.02554
DNAJC1 DnaJ (Hsp40) homolog, subfamily C, member 1 -0.0253956
RAPGEF6 Rap guanine nucleotide exchange factor (GEF) 6 -0.0252437
SOS2 son of sevenless homolog 2 (Drosophila) -0.0252314
JUN jun proto-oncogene -0.0252258
FEZ2 fasciculation and elongation protein zeta 2 (zygin II) -0.0250788
QKI QKI, KH domain containing, RNA binding -0.0250592
SCARB2 scavenger receptor class B, member 2 -0.0249878
TPM4 tropomyosin 4 -0.0249544