Bestatin_A-427 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bestatin perturbation in A-427 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bestatin_A-427 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AREG amphiregulin 0.13202
TMSB10 thymosin beta 10 0.129811
RPS12 ribosomal protein S12 0.0945869
RPS3 ribosomal protein S3 0.0844312
CNRIP1 cannabinoid receptor interacting protein 1 0.061084
DST dystonin 0.0550194
RPS2 ribosomal protein S2 0.052744
RPL23 ribosomal protein L23 0.0492544
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0481073
RPS29 ribosomal protein S29 0.0472116
RPL36 ribosomal protein L36 0.045048
RPS19 ribosomal protein S19 0.0447008
RPL37A ribosomal protein L37a 0.0438112
RPS4X ribosomal protein S4, X-linked 0.0410298
PRRC2C proline-rich coiled-coil 2C 0.0401711
MKI67 marker of proliferation Ki-67 0.0392029
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0364611
EZR ezrin 0.0358637
RPS11 ribosomal protein S11 0.0350711
RPS17 ribosomal protein S17 0.0349524
ANKRD28 ankyrin repeat domain 28 0.0347382
NACA nascent polypeptide-associated complex alpha subunit 0.0345889
ARID1B AT rich interactive domain 1B (SWI1-like) 0.0345045
ZNF292 zinc finger protein 292 0.0338307
PCBP2 poly(rC) binding protein 2 0.0331444
SMYD3 SET and MYND domain containing 3 0.0320754
BIRC6 baculoviral IAP repeat containing 6 0.0316504
TPI1 triosephosphate isomerase 1 0.0316085
AKAP9 A kinase (PRKA) anchor protein 9 0.0315917
RPS27 ribosomal protein S27 0.0312063
KMT2D lysine (K)-specific methyltransferase 2D 0.0311642
RPS8 ribosomal protein S8 0.0308812
NEK7 NIMA-related kinase 7 0.0306917
CENPE centromere protein E, 312kDa 0.0305505
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0298421
FER fer (fps/fes related) tyrosine kinase 0.0295076
ROCK1 Rho-associated, coiled-coil containing protein kinase 1 0.0293134
RPL17-C18ORF32 RPL17-C18orf32 readthrough 0.0290861
CEP192 centrosomal protein 192kDa 0.0286002
NEBL nebulette 0.0283918
RPL37 ribosomal protein L37 0.0282873
RIMKLB ribosomal modification protein rimK-like family member B 0.0277694
CENPF centromere protein F, 350/400kDa 0.0265517
PPP1R12A protein phosphatase 1, regulatory subunit 12A 0.0259197
BRWD1 bromodomain and WD repeat domain containing 1 0.0257079
COX4I1 cytochrome c oxidase subunit IV isoform 1 0.0254356
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.0252404
CCSER1 coiled-coil serine-rich protein 1 0.0245961
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0245955
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0245917
NCEH1 neutral cholesterol ester hydrolase 1 0.0245072
BTBD10 BTB (POZ) domain containing 10 0.0239495
MRPL51 mitochondrial ribosomal protein L51 0.0239072
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0238165
RPL36A ribosomal protein L36a 0.0236666
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0231624
WSB1 WD repeat and SOCS box containing 1 0.0230286
TBK1 TANK-binding kinase 1 0.0228919
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0224661
KIF18B kinesin family member 18B 0.0224333
CKAP5 cytoskeleton associated protein 5 0.0222635
PUM2 pumilio RNA-binding family member 2 0.0222152
RPS26 ribosomal protein S26 0.022019
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0220138
PCM1 pericentriolar material 1 0.0218704
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0216214
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0215124
ENAH enabled homolog (Drosophila) 0.0215011
RACK1 receptor for activated C kinase 1 0.0213022
ZNF146 zinc finger protein 146 0.0210508
SP3 Sp3 transcription factor 0.0210165
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0209457
CAPRIN1 cell cycle associated protein 1 0.0207292
ARID1A AT rich interactive domain 1A (SWI-like) 0.0206221
GGNBP2 gametogenetin binding protein 2 0.0206051
SET SET nuclear proto-oncogene 0.0205234
CDK19 cyclin-dependent kinase 19 0.0205212
RPRD2 regulation of nuclear pre-mRNA domain containing 2 0.0204829
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0203391
TBC1D5 TBC1 domain family, member 5 0.0203158
NCAPD2 non-SMC condensin I complex, subunit D2 0.0202842
RPL26 ribosomal protein L26 0.0201601
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 0.0201308
CRISPLD1 cysteine-rich secretory protein LCCL domain containing 1 0.020123
NCOA6 nuclear receptor coactivator 6 0.020101
EDARADD EDAR-associated death domain 0.020012
TPM3 tropomyosin 3 0.0199324
KMT2C lysine (K)-specific methyltransferase 2C 0.0198754
EIF5B eukaryotic translation initiation factor 5B 0.019875
MSH6 mutS homolog 6 0.0197386
PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha 0.0196692
SRSF11 serine/arginine-rich splicing factor 11 0.0196153
SEC62 SEC62 homolog (S. cerevisiae) 0.0196024
RBM25 RNA binding motif protein 25 0.0195717
ERBB4 erb-b2 receptor tyrosine kinase 4 0.0192076
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0190486
ZFAND6 zinc finger, AN1-type domain 6 0.0189716
RPS6 ribosomal protein S6 0.0189701
ARID2 AT rich interactive domain 2 (ARID, RFX-like) 0.018873
THOC2 THO complex 2 0.0186895

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.245237
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.177918
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.133521
MMP12 matrix metallopeptidase 12 -0.0961943
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0953934
ALDH1A1 aldehyde dehydrogenase 1 family, member A1 -0.0907019
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0891317
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0877371
STARD4 StAR-related lipid transfer (START) domain containing 4 -0.0753567
CUBN cubilin (intrinsic factor-cobalamin receptor) -0.0736331
TPT1 tumor protein, translationally-controlled 1 -0.0733198
HMGA2 high mobility group AT-hook 2 -0.0680754
EHBP1 EH domain binding protein 1 -0.0636165
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0632995
SERPINB2 serpin peptidase inhibitor, clade B (ovalbumin), member 2 -0.0572026
ZNF804A zinc finger protein 804A -0.0568053
PCDH7 protocadherin 7 -0.053041
ASPH aspartate beta-hydroxylase -0.0525509
ACTG1 actin gamma 1 -0.0521122
NAP1L1 nucleosome assembly protein 1-like 1 -0.0516911
PTGES3 prostaglandin E synthase 3 (cytosolic) -0.0515365
HMGA1 high mobility group AT-hook 1 -0.0452523
IFIH1 interferon induced with helicase C domain 1 -0.0446742
LOC112694756 uncharaterized LOC112694756 -0.0443266
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0442314
SLC38A2 solute carrier family 38, member 2 -0.0441397
H1-0 H1.0 linker histone -0.0440437
INTS6 integrator complex subunit 6 -0.0437603
HDAC9 histone deacetylase 9 -0.0433561
AHNAK AHNAK nucleoprotein -0.0431976
RAB7A RAB7A, member RAS oncogene family -0.0420287
CLDN1 claudin 1 -0.0400376
VDAC1 voltage-dependent anion channel 1 -0.039502
MYL12B myosin, light chain 12B, regulatory -0.0392889
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0391716
CANX calnexin -0.0387002
CCND1 cyclin D1 -0.0372775
PDE4D phosphodiesterase 4D, cAMP-specific -0.0370238
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0348425
PDK4 pyruvate dehydrogenase kinase, isozyme 4 -0.0329526
RPLP0 ribosomal protein, large, P0 -0.0328167
ITGBL1 integrin, beta-like 1 (with EGF-like repeat domains) -0.0325021
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0315354
USP53 ubiquitin specific peptidase 53 -0.0302287
RTN3 reticulon 3 -0.0300286
LARS1 leucyl-tRNA synthetase 1 -0.029647
RPL38 ribosomal protein L38 -0.0295669
PTMA prothymosin, alpha -0.0294488
CCT4 chaperonin containing TCP1, subunit 4 (delta) -0.0291827
BIRC3 baculoviral IAP repeat containing 3 -0.0290712
LMO7 LIM domain 7 -0.0290403
PCDH9 protocadherin 9 -0.029029
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0288967
KLF6 Kruppel-like factor 6 -0.0288036
HNRNPK heterogeneous nuclear ribonucleoprotein K -0.0287416
DKK1 dickkopf WNT signaling pathway inhibitor 1 -0.0279823
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.0277049
ZNF638 zinc finger protein 638 -0.027223
JMJD1C jumonji domain containing 1C -0.027028
PDIA3 protein disulfide isomerase family A, member 3 -0.0268325
AP3S1 adaptor-related protein complex 3, sigma 1 subunit -0.0268096
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0267223
RAD21 RAD21 homolog (S. pombe) -0.0263314
HMGB1 high mobility group box 1 -0.0262951
NABP1 nucleic acid binding protein 1 -0.0260366
RBM39 RNA binding motif protein 39 -0.0259721
RASAL2 RAS protein activator like 2 -0.0259355
CDK6 cyclin-dependent kinase 6 -0.0257852
PCNP PEST proteolytic signal containing nuclear protein -0.0256788
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0256137
PPP4R3B protein phosphatase 4 regulatory subunit 3B -0.0250713
UBC ubiquitin C -0.0248926
TPM4 tropomyosin 4 -0.0246991
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0246255
GJA1 gap junction protein, alpha 1, 43kDa -0.0243714
SF3B2 splicing factor 3b, subunit 2, 145kDa -0.0242575
DTNA dystrobrevin, alpha -0.0239894
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0238348
KDM3A lysine (K)-specific demethylase 3A -0.0235894
LRRC23 leucine rich repeat containing 23 -0.0235071
SLC38A1 solute carrier family 38, member 1 -0.0234403
WNK1 WNK lysine deficient protein kinase 1 -0.0232908
HOMER1 homer scaffolding protein 1 -0.0232136
BRCA1 breast cancer 1, early onset -0.0229808
GOLGB1 golgin B1 -0.0229429
GNAS GNAS complex locus -0.0229426
MAML3 mastermind-like 3 (Drosophila) -0.022755
TUBA1B tubulin, alpha 1b -0.0226787
SRP72 signal recognition particle 72kDa -0.0226531
SPTSSA serine palmitoyltransferase, small subunit A -0.0226336
TFG TRK-fused gene -0.0225951
CAVIN1 caveolae associated protein 1 -0.0225208
RSL1D1 ribosomal L1 domain containing 1 -0.022287
RPL6 ribosomal protein L6 -0.0222833
PARK7 parkinson protein 7 -0.0221839
ADIPOR2 adiponectin receptor 2 -0.022129
NSD2 nuclear receptor binding SET domain protein 2 -0.0219202
ELP4 elongator acetyltransferase complex subunit 4 -0.0218109
VTI1A vesicle transport through interaction with t-SNAREs 1A -0.0216201
YME1L1 YME1-like 1 ATPase -0.021234