Bestatin_COLO 205 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bestatin perturbation in COLO 205 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bestatin_COLO 205 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ERRFI1 ERBB receptor feedback inhibitor 1 0.101659
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0817816
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0776905
TSC22D1 TSC22 domain family, member 1 0.0766707
NDRG1 N-myc downstream regulated 1 0.0751322
LDHA lactate dehydrogenase A 0.0678012
EGLN3 egl-9 family hypoxia-inducible factor 3 0.0615377
MBNL2 muscleblind-like splicing regulator 2 0.0532022
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0512323
MACC1 metastasis associated in colon cancer 1 0.0493813
FNDC3B fibronectin type III domain containing 3B 0.046554
GOLGB1 golgin B1 0.046254
FTH1 ferritin, heavy polypeptide 1 0.0453366
ZMYND8 zinc finger, MYND-type containing 8 0.0451366
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0450203
EZR ezrin 0.0436033
IGFBP3 insulin-like growth factor binding protein 3 0.042315
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0411475
BCLAF1 BCL2-associated transcription factor 1 0.0403161
TOB1 transducer of ERBB2, 1 0.0385538
DSPP dentin sialophosphoprotein 0.0377711
MORF4L2 mortality factor 4 like 2 0.0376345
LMO7 LIM domain 7 0.0369528
IFNGR1 interferon gamma receptor 1 0.0369139
MXI1 MAX interactor 1, dimerization protein 0.0355226
WDR45B WD repeat domain 45B 0.0351036
EHF ets homologous factor 0.0337949
CANX calnexin 0.0322842
FNDC3A fibronectin type III domain containing 3A 0.0314875
NPSR1 neuropeptide S receptor 1 0.0313028
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0303829
PCK1 phosphoenolpyruvate carboxykinase 1 (soluble) 0.0295019
LPCAT1 lysophosphatidylcholine acyltransferase 1 0.029425
BHLHE40 basic helix-loop-helix family, member e40 0.0292107
CLTC clathrin, heavy chain (Hc) 0.0291731
RREB1 ras responsive element binding protein 1 0.0284006
PTEN phosphatase and tensin homolog 0.0281914
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0275048
ARRDC3 arrestin domain containing 3 0.0274748
MLEC malectin 0.0272136
CXCL8 chemokine (C-X-C motif) ligand 8 0.0270198
ACBD3 acyl-CoA binding domain containing 3 0.026807
ANKHD1 ankyrin repeat and KH domain containing 1 0.0260918
ARGLU1 arginine and glutamate rich 1 0.0255855
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0250294
PACSIN2 protein kinase C and casein kinase substrate in neurons 2 0.0249351
ABHD2 abhydrolase domain containing 2 0.024353
EPS8 epidermal growth factor receptor pathway substrate 8 0.0243218
STK39 serine threonine kinase 39 0.0241023
THOC2 THO complex 2 0.0239118
KRT18 keratin 18, type I 0.0236172
CMIP c-Maf inducing protein 0.023542
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0234684
ZKSCAN1 zinc finger with KRAB and SCAN domains 1 0.023368
PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme 0.0231499
KIF16B kinesin family member 16B 0.0231465
XRN1 5'-3' exoribonuclease 1 0.0230028
MBOAT2 membrane bound O-acyltransferase domain containing 2 0.0229501
SREBF2 sterol regulatory element binding transcription factor 2 0.0226681
PDIA3 protein disulfide isomerase family A, member 3 0.0222437
NT5C3A 5'-nucleotidase, cytosolic IIIA 0.0219186
SEC31A SEC31 homolog A (S. cerevisiae) 0.021896
ENO1 enolase 1, (alpha) 0.0217386
TMEM123 transmembrane protein 123 0.0216384
PARP9 poly (ADP-ribose) polymerase family, member 9 0.0215201
JUN jun proto-oncogene 0.0215068
AKAP9 A kinase (PRKA) anchor protein 9 0.0214644
RAB1A RAB1A, member RAS oncogene family 0.0213859
MEF2A myocyte enhancer factor 2A 0.0211892
PHC3 polyhomeotic homolog 3 (Drosophila) 0.0209798
GRK3 G protein-coupled receptor kinase 3 0.0206293
TMED2 transmembrane emp24 domain trafficking protein 2 0.0206192
TMCC1 transmembrane and coiled-coil domain family 1 0.0204911
ZC3H11A zinc finger CCCH-type containing 11A 0.0204289
GOLGA4 golgin A4 0.0203747
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0202858
VOPP1 vesicular, overexpressed in cancer, prosurvival protein 1 0.0202734
SLC22A23 solute carrier family 22, member 23 0.0202343
PLA2G2A phospholipase A2, group IIA (platelets, synovial fluid) 0.01995
SFTPA2 surfactant protein A2 0.0196441
STYXL2 serine/threonine/tyrosine interacting like 2 0.0191715
TM9SF2 transmembrane 9 superfamily member 2 0.0190384
GALNT3 polypeptide N-acetylgalactosaminyltransferase 3 0.0188392
PRRC2C proline-rich coiled-coil 2C 0.0188324
ABLIM1 actin binding LIM protein 1 0.0186934
HELZ helicase with zinc finger 0.0186548
PNPLA8 patatin-like phospholipase domain containing 8 0.0186516
GPBP1L1 GC-rich promoter binding protein 1-like 1 0.0186258
SEC24D SEC24 family member D 0.0183244
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0181821
CALU calumenin 0.0181746
LCORL ligand dependent nuclear receptor corepressor-like 0.0181586
RACK1 receptor for activated C kinase 1 0.0181247
MED15 mediator complex subunit 15 0.0180899
MCTP2 multiple C2 domains, transmembrane 2 0.018011
TRIP11 thyroid hormone receptor interactor 11 0.0179637
ARF4 ADP-ribosylation factor 4 0.0177763
NIPSNAP2 nipsnap homolog 2 0.017746
HYOU1 hypoxia up-regulated 1 0.0176652
EIF2AK3 eukaryotic translation initiation factor 2-alpha kinase 3 0.0173075

decreased expression

Symbol Name Standardized Value
TPT1 tumor protein, translationally-controlled 1 -0.139352
HLA-B major histocompatibility complex, class I, B -0.104121
INTS6 integrator complex subunit 6 -0.103138
LCN2 lipocalin 2 -0.100208
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0902878
B2M beta-2-microglobulin -0.0871748
C6ORF132 chromosome 6 open reading frame 132 -0.0846191
VCL vinculin -0.0843532
EPSTI1 epithelial stromal interaction 1 (breast) -0.0805944
RPL35A ribosomal protein L35a -0.0776361
TMSB10 thymosin beta 10 -0.0693974
EGR1 early growth response 1 -0.0688656
RNF213 ring finger protein 213 -0.0685912
N4BP2L2 NEDD4 binding protein 2-like 2 -0.0664198
IFI6 interferon, alpha-inducible protein 6 -0.0646499
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 -0.0623044
AHI1 Abelson helper integration site 1 -0.0604426
ANXA2 annexin A2 -0.0595793
RIGI RNA sensor RIG-I -0.0588972
RPLP1 ribosomal protein, large, P1 -0.0587403
MT2A metallothionein 2A -0.0580996
SP100 SP100 nuclear antigen -0.0569598
FTL ferritin, light polypeptide -0.0563856
MAP7 microtubule-associated protein 7 -0.0537911
DNAJC15 DnaJ (Hsp40) homolog, subfamily C, member 15 -0.0522379
GMDS GDP-mannose 4,6-dehydratase -0.0517573
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0491374
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 -0.0479639
ACTN4 actinin, alpha 4 -0.0442968
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 -0.0428216
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 -0.0426426
RAB7A RAB7A, member RAS oncogene family -0.0420313
ZBTB20 zinc finger and BTB domain containing 20 -0.0418684
RPL19 ribosomal protein L19 -0.0417889
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0414648
HLA-C major histocompatibility complex, class I, C -0.041352
SHB Src homology 2 domain containing adaptor protein B -0.0399679
RPS19 ribosomal protein S19 -0.0397226
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0392292
RPL11 ribosomal protein L11 -0.0392242
GCLC glutamate-cysteine ligase, catalytic subunit -0.0391546
RPS24 ribosomal protein S24 -0.0387691
NSMCE2 non-SMC element 2, MMS21 homolog (S. cerevisiae) -0.0387169
LPP LIM domain containing preferred translocation partner in lipoma -0.0382604
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0381521
STK24 serine/threonine kinase 24 -0.0380412
MYO1E myosin IE -0.0380016
MT1X metallothionein 1X -0.037846
RPL7L1 ribosomal protein L7-like 1 -0.0373576
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.0370633
ATXN1 ataxin 1 -0.0369833
SAMD12 sterile alpha motif domain containing 12 -0.0364317
ETV6 ets variant 6 -0.0360717
LOC112694756 uncharaterized LOC112694756 -0.0356763
FOXP1 forkhead box P1 -0.0354408
RPS6 ribosomal protein S6 -0.0354074
CTNND1 catenin (cadherin-associated protein), delta 1 -0.0345819
RPL23 ribosomal protein L23 -0.0344261
VMP1 vacuole membrane protein 1 -0.0338708
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0338389
S100A10 S100 calcium binding protein A10 -0.033676
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 -0.033445
NCKAP5 NCK-associated protein 5 -0.0333571
PRKCA protein kinase C, alpha -0.0329381
MX2 MX dynamin-like GTPase 2 -0.0327339
PERP PERP, TP53 apoptosis effector -0.0326338
RSAD2 radical S-adenosyl methionine domain containing 2 -0.0326169
PLSCR1 phospholipid scramblase 1 -0.0325791
H3-3B H3.3 histone B -0.0324743
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0320464
H1-0 H1.0 linker histone -0.0318799
PTMA prothymosin, alpha -0.0315854
STS steroid sulfatase (microsomal), isozyme S -0.0315743
JAK1 Janus kinase 1 -0.0312118
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.030896
APLP2 amyloid beta (A4) precursor-like protein 2 -0.030229
ERBIN erbb2 interacting protein -0.0299384
WSB1 WD repeat and SOCS box containing 1 -0.0298417
BTBD9 BTB (POZ) domain containing 9 -0.0298143
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0296185
RPL31 ribosomal protein L31 -0.0296037
RPL12 ribosomal protein L12 -0.029575
RABGAP1L RAB GTPase activating protein 1-like -0.0295591
RPL37 ribosomal protein L37 -0.0295558
XAF1 XIAP associated factor 1 -0.0294427
SMYD3 SET and MYND domain containing 3 -0.0291447
RNF43 ring finger protein 43 -0.0289807
HLA-A major histocompatibility complex, class I, A -0.0288256
TJP1 tight junction protein 1 -0.0288211
MAP3K5 mitogen-activated protein kinase kinase kinase 5 -0.0287874
RAD51B RAD51 paralog B -0.0286382
CLDN4 claudin 4 -0.0283411
RPL28 ribosomal protein L28 -0.028011
ATP11A ATPase, class VI, type 11A -0.0279591
NT5C2 5'-nucleotidase, cytosolic II -0.0276622
AKAP13 A kinase (PRKA) anchor protein 13 -0.0275976
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) -0.0274293
NF1 neurofibromin 1 -0.0269585
YAP1 Yes-associated protein 1 -0.0269241
RPL34 ribosomal protein L34 -0.0267905