Bestatin_LS 180 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bestatin perturbation in LS 180 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bestatin_LS 180 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
KRT18 keratin 18, type I 0.147
PTMA prothymosin, alpha 0.123523
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.105406
EREG epiregulin 0.0957771
LDHA lactate dehydrogenase A 0.0921615
NDRG1 N-myc downstream regulated 1 0.0913587
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0897632
MUC6 mucin 6, oligomeric mucus/gel-forming 0.0882331
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0874329
FAM13A family with sequence similarity 13, member A 0.0787019
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0755939
FLNB filamin B, beta 0.0752644
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0699404
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0697005
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0614552
RREB1 ras responsive element binding protein 1 0.0596002
TXNIP thioredoxin interacting protein 0.0573511
WAC WW domain containing adaptor with coiled-coil 0.0567185
RNF145 ring finger protein 145 0.0562549
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.053503
KMT2E lysine (K)-specific methyltransferase 2E 0.0514604
NUP58 nucleoporin 58 0.0503597
ERRFI1 ERBB receptor feedback inhibitor 1 0.0488667
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0479455
EZR ezrin 0.0479359
EHF ets homologous factor 0.0467997
DDIT4 DNA-damage-inducible transcript 4 0.0458737
ANXA2 annexin A2 0.0453248
GPBP1 GC-rich promoter binding protein 1 0.0447232
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0444759
CCNL1 cyclin L1 0.0442535
GOLGA4 golgin A4 0.0437344
DSCAM Down syndrome cell adhesion molecule 0.0435154
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0435146
ENO1 enolase 1, (alpha) 0.0418008
ITPRID2 ITPR interacting domain containing 2 0.0407917
MORF4L2 mortality factor 4 like 2 0.0406969
RPS2 ribosomal protein S2 0.0406196
KIF5B kinesin family member 5B 0.0402761
ZNF292 zinc finger protein 292 0.040169
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.0397629
UBA6 ubiquitin-like modifier activating enzyme 6 0.0393568
LRRC1 leucine rich repeat containing 1 0.0387758
IBTK inhibitor of Bruton agammaglobulinemia tyrosine kinase 0.0385332
MLEC malectin 0.0383845
MED13L mediator complex subunit 13-like 0.0383389
ANKRD11 ankyrin repeat domain 11 0.0383213
MXI1 MAX interactor 1, dimerization protein 0.0381534
MUC5AC mucin 5AC, oligomeric mucus/gel-forming 0.0380917
WDR45B WD repeat domain 45B 0.0375231
DSPP dentin sialophosphoprotein 0.0371625
NCOR1 nuclear receptor corepressor 1 0.0370825
KDM6A lysine (K)-specific demethylase 6A 0.0368117
RBM39 RNA binding motif protein 39 0.03664
ADAM17 ADAM metallopeptidase domain 17 0.0365766
TFG TRK-fused gene 0.036304
ESRP1 epithelial splicing regulatory protein 1 0.0362214
TMSB4X thymosin beta 4, X-linked 0.0361995
FBXW7 F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase 0.0355567
AREG amphiregulin 0.035465
HSPA8 heat shock 70kDa protein 8 0.0352286
NEK7 NIMA-related kinase 7 0.0352036
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.035112
RAB6A RAB6A, member RAS oncogene family 0.035044
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 0.0349908
FTH1 ferritin, heavy polypeptide 1 0.0343646
YTHDC1 YTH domain containing 1 0.0342863
RLF rearranged L-myc fusion 0.0342167
RPS3 ribosomal protein S3 0.0338909
HELZ helicase with zinc finger 0.0336898
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 0.0334979
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0331121
ESYT2 extended synaptotagmin-like protein 2 0.0330059
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0329034
PTPRR protein tyrosine phosphatase, receptor type, R 0.0327644
SEC31A SEC31 homolog A (S. cerevisiae) 0.0317436
SETD5 SET domain containing 5 0.0312327
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0308753
RPS12 ribosomal protein S12 0.0306264
NACA nascent polypeptide-associated complex alpha subunit 0.0304562
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0304164
PUM1 pumilio RNA-binding family member 1 0.0303148
MARK3 MAP/microtubule affinity-regulating kinase 3 0.0300593
GARS1 glycyl-tRNA synthetase 1 0.0299763
WDR43 WD repeat domain 43 0.0299345
COPA coatomer protein complex, subunit alpha 0.0298962
BCLAF1 BCL2-associated transcription factor 1 0.029667
PCBP2 poly(rC) binding protein 2 0.0293261
SPAG9 sperm associated antigen 9 0.0292983
ZMYM2 zinc finger, MYM-type 2 0.029198
PLAUR plasminogen activator, urokinase receptor 0.0288314
MXD1 MAX dimerization protein 1 0.0288289
TM9SF2 transmembrane 9 superfamily member 2 0.0288267
UBE2D3 ubiquitin-conjugating enzyme E2D 3 0.0288201
FOSL1 FOS-like antigen 1 0.0286341
SET SET nuclear proto-oncogene 0.028555
RAB1A RAB1A, member RAS oncogene family 0.0285066
BHLHE40 basic helix-loop-helix family, member e40 0.028428
STT3B STT3B, subunit of the oligosaccharyltransferase complex (catalytic) 0.0282937
TRA2A transformer 2 alpha homolog (Drosophila) 0.0282716

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.206158
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.147645
TMSB10 thymosin beta 10 -0.098178
GMDS GDP-mannose 4,6-dehydratase -0.0885269
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0865441
LOC112694756 uncharaterized LOC112694756 -0.0796946
NALF1 NALCN channel auxiliary factor 1 -0.0781011
RPS19 ribosomal protein S19 -0.0748795
PTPRK protein tyrosine phosphatase, receptor type, K -0.073001
RPLP1 ribosomal protein, large, P1 -0.0727759
SMYD3 SET and MYND domain containing 3 -0.0727137
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0719819
CADPS Ca++-dependent secretion activator -0.06882
MT2A metallothionein 2A -0.0678426
PDE4D phosphodiesterase 4D, cAMP-specific -0.0625572
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 -0.0620585
FOXP1 forkhead box P1 -0.060163
NPSR1 neuropeptide S receptor 1 -0.0595836
EXT1 exostosin glycosyltransferase 1 -0.0588652
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B -0.0553158
ATXN1 ataxin 1 -0.0535461
ZBTB20 zinc finger and BTB domain containing 20 -0.0533116
PARD3B par-3 family cell polarity regulator beta -0.0529714
CCSER1 coiled-coil serine-rich protein 1 -0.0512885
KDM4C lysine (K)-specific demethylase 4C -0.0494932
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0458182
MT1X metallothionein 1X -0.045097
ALCAM activated leukocyte cell adhesion molecule -0.0443277
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 -0.0437842
MAML3 mastermind-like 3 (Drosophila) -0.043698
RPL34 ribosomal protein L34 -0.0432613
SAMD5 sterile alpha motif domain containing 5 -0.0428328
ONECUT3 one cut homeobox 3 -0.0426115
ASPH aspartate beta-hydroxylase -0.0423171
RPL35A ribosomal protein L35a -0.0419193
POF1B premature ovarian failure, 1B -0.041774
RPS21 ribosomal protein S21 -0.0417273
FHIT fragile histidine triad -0.0413643
SLC35F3 solute carrier family 35, member F3 -0.04115
AHNAK AHNAK nucleoprotein -0.0406913
CEMIP cell migration inducing protein, hyaluronan binding -0.0405284
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0402318
FTL ferritin, light polypeptide -0.0399004
BACE2 beta-site APP-cleaving enzyme 2 -0.0394815
RPL19 ribosomal protein L19 -0.0390222
RPL32 ribosomal protein L32 -0.0389858
RPL12 ribosomal protein L12 -0.0386816
MYO1E myosin IE -0.0383029
H1-0 H1.0 linker histone -0.0382161
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0368007
RPL36 ribosomal protein L36 -0.0364997
MECOM MDS1 and EVI1 complex locus -0.0347704
RRBP1 ribosome binding protein 1 -0.034187
NFIA nuclear factor I/A -0.0340031
MT1E metallothionein 1E -0.0339756
EGFR epidermal growth factor receptor -0.0336412
N4BP2L2 NEDD4 binding protein 2-like 2 -0.0334525
PSD3 pleckstrin and Sec7 domain containing 3 -0.0329006
CADPS2 Ca++-dependent secretion activator 2 -0.0328819
RPLP2 ribosomal protein, large, P2 -0.0325633
FAF1 Fas (TNFRSF6) associated factor 1 -0.0315861
BCKDHB branched chain keto acid dehydrogenase E1, beta polypeptide -0.0313229
PTPRG protein tyrosine phosphatase, receptor type, G -0.031281
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0311466
ANK3 ankyrin 3, node of Ranvier (ankyrin G) -0.0310177
GREB1L growth regulation by estrogen in breast cancer-like -0.030613
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme -0.03061
FAT1 FAT atypical cadherin 1 -0.0305628
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.029815
RAD51B RAD51 paralog B -0.0289888
RPLP0 ribosomal protein, large, P0 -0.0289473
CALM3 calmodulin 3 (phosphorylase kinase, delta) -0.028711
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.028649
ANTXR2 anthrax toxin receptor 2 -0.0285445
S100A14 S100 calcium binding protein A14 -0.0284402
VCL vinculin -0.0282172
PATJ PATJ crumbs cell polarity complex component -0.0281996
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.0279696
CD44 CD44 molecule (Indian blood group) -0.0278766
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.0278144
ACTN4 actinin, alpha 4 -0.0276295
SIPA1L1 signal-induced proliferation-associated 1 like 1 -0.0275931
PTPRB protein tyrosine phosphatase, receptor type, B -0.0274917
NAB1 NGFI-A binding protein 1 (EGR1 binding protein 1) -0.027483
ACTG1 actin gamma 1 -0.0273621
MGST1 microsomal glutathione S-transferase 1 -0.0269947
WNK1 WNK lysine deficient protein kinase 1 -0.0269753
SLCO1B3-SLCO1B7 SLCO1B3-SLCO1B7 readthrough -0.0268519
SAMD4A sterile alpha motif domain containing 4A -0.0264648
FBXL17 F-box and leucine-rich repeat protein 17 -0.0263918
PTEN phosphatase and tensin homolog -0.026387
RPL28 ribosomal protein L28 -0.0259439
KANK1 KN motif and ankyrin repeat domains 1 -0.0255688
PALLD palladin, cytoskeletal associated protein -0.0255681
TRAPPC9 trafficking protein particle complex 9 -0.0252569
SAMD12 sterile alpha motif domain containing 12 -0.0250609
ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 -0.0249344
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) -0.0248805
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0248771
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.0248245