Bestatin_NCI-H460 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bestatin perturbation in NCI-H460 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bestatin_NCI-H460 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0545059
IGFBP3 insulin-like growth factor binding protein 3 0.0472689
RPS4X ribosomal protein S4, X-linked 0.0425626
ERRFI1 ERBB receptor feedback inhibitor 1 0.0383579
FLNB filamin B, beta 0.0321588
HSPA8 heat shock 70kDa protein 8 0.0266597
PRELID2 PRELI domain containing 2 0.0265851
MXI1 MAX interactor 1, dimerization protein 0.02542
CCL5 chemokine (C-C motif) ligand 5 0.0245044
SPAG9 sperm associated antigen 9 0.0243789
MORF4L2 mortality factor 4 like 2 0.0239633
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0228763
NAMPT nicotinamide phosphoribosyltransferase 0.0227615
UBAP2L ubiquitin associated protein 2-like 0.020094
DDIT4 DNA-damage-inducible transcript 4 0.0198907
APP amyloid beta (A4) precursor protein 0.0189866
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0180854
ARRDC3 arrestin domain containing 3 0.0180685
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0170174
CTBP2 C-terminal binding protein 2 0.015882
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0158474
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0154552
BZW1 basic leucine zipper and W2 domains 1 0.0153221
NUP58 nucleoporin 58 0.0153121
BIRC6 baculoviral IAP repeat containing 6 0.0148735
AGFG1 ArfGAP with FG repeats 1 0.0147866
FAM13A family with sequence similarity 13, member A 0.0141574
DDX3Y DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked 0.0140354
LDHA lactate dehydrogenase A 0.0138322
NACA nascent polypeptide-associated complex alpha subunit 0.0138187
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0136701
CAMTA1 calmodulin binding transcription activator 1 0.0135445
NONO non-POU domain containing, octamer-binding 0.0134439
KDM3A lysine (K)-specific demethylase 3A 0.013342
EIF4H eukaryotic translation initiation factor 4H 0.0133277
TBC1D22A TBC1 domain family, member 22A 0.0132862
PRRC2C proline-rich coiled-coil 2C 0.0130102
FLNA filamin A, alpha 0.0129994
SUCO SUN domain containing ossification factor 0.0129758
RPS2 ribosomal protein S2 0.0129553
SLC16A6 solute carrier family 16, member 6 0.0128073
UBQLN1 ubiquilin 1 0.0127594
SFTPA2 surfactant protein A2 0.0127224
EZR ezrin 0.0125076
DNER delta/notch-like EGF repeat containing 0.0123509
CXCL8 chemokine (C-X-C motif) ligand 8 0.0122377
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0119138
EFNA1 ephrin-A1 0.0118434
NFE2L1 nuclear factor, erythroid 2-like 1 0.0117261
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0111087
RPS12 ribosomal protein S12 0.0110324
FUS FUS RNA binding protein 0.0110163
SQSTM1 sequestosome 1 0.0108552
ANKRD11 ankyrin repeat domain 11 0.0107463
LPCAT1 lysophosphatidylcholine acyltransferase 1 0.0106729
ZMIZ1 zinc finger, MIZ-type containing 1 0.0106711
HOOK2 hook microtubule-tethering protein 2 0.0104044
USP34 ubiquitin specific peptidase 34 0.010312
HELZ helicase with zinc finger 0.0103036
NDRG1 N-myc downstream regulated 1 0.0103012
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0102345
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0101265
RSRC2 arginine/serine-rich coiled-coil 2 0.0098775
BHLHE40 basic helix-loop-helix family, member e40 0.00971106
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.00970745
SURF4 surfeit 4 0.00965556
ZFC3H1 zinc finger, C3H1-type containing 0.00958101
NGLY1 N-glycanase 1 0.00949651
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa 0.00939582
ZNF292 zinc finger protein 292 0.00936021
TMED2 transmembrane emp24 domain trafficking protein 2 0.00933352
SET SET nuclear proto-oncogene 0.00928387
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.00924144
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.00913656
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.00911106
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 0.00907249
CEP95 centrosomal protein 95kDa 0.00899386
TNIP1 TNFAIP3 interacting protein 1 0.00894446
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.00893554
ACBD3 acyl-CoA binding domain containing 3 0.00882632
TENM2 teneurin transmembrane protein 2 0.00872932
RACK1 receptor for activated C kinase 1 0.00859646
SERINC1 serine incorporator 1 0.00853974
PAIP2 poly(A) binding protein interacting protein 2 0.00846206
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.00836318
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.00830485
ANXA5 annexin A5 0.00826552
ARGLU1 arginine and glutamate rich 1 0.00822779
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 0.00822691
PPFIA4 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 0.0081621
NOP58 NOP58 ribonucleoprotein 0.00813684
WSB1 WD repeat and SOCS box containing 1 0.00810624
ASCC3 activating signal cointegrator 1 complex subunit 3 0.00808352
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.00799871
ZC3H11A zinc finger CCCH-type containing 11A 0.00798457
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.00793502
FAM168B family with sequence similarity 168, member B 0.00786279
ANGPTL4 angiopoietin-like 4 0.00780944
ANKRD10 ankyrin repeat domain 10 0.00779692
SRP14 signal recognition particle 14kDa (homologous Alu RNA binding protein) 0.00779448

decreased expression

Symbol Name Standardized Value
PDE4D phosphodiesterase 4D, cAMP-specific -0.18045
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.179241
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.171082
GDA guanine deaminase -0.139344
COL5A2 collagen, type V, alpha 2 -0.130876
PSD3 pleckstrin and Sec7 domain containing 3 -0.106612
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) -0.105847
PDLIM5 PDZ and LIM domain 5 -0.0843756
ASPH aspartate beta-hydroxylase -0.0831307
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0733882
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0703715
DST dystonin -0.0699287
EFNA5 ephrin-A5 -0.0696748
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 -0.0689253
POTEF POTE ankyrin domain family, member F -0.0684092
VIM vimentin -0.0675377
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0655127
COL8A1 collagen, type VIII, alpha 1 -0.0627974
KYNU kynureninase -0.0622833
TXNRD1 thioredoxin reductase 1 -0.061393
SMYD3 SET and MYND domain containing 3 -0.0605341
PM20D1 peptidase M20 domain containing 1 -0.060236
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.0594499
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0586412
FTL ferritin, light polypeptide -0.0578956
DOCK4 dedicator of cytokinesis 4 -0.0567118
SLC39A8 solute carrier family 39 (zinc transporter), member 8 -0.0541759
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.0540278
FN1 fibronectin 1 -0.0531524
NALF1 NALCN channel auxiliary factor 1 -0.050987
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.048947
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0483174
PDE10A phosphodiesterase 10A -0.046161
COL4A5 collagen, type IV, alpha 5 -0.0449692
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.044916
SLC38A2 solute carrier family 38, member 2 -0.0445355
RTN1 reticulon 1 -0.0434324
MYOF myoferlin -0.0432444
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0432247
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 -0.042707
FTH1 ferritin, heavy polypeptide 1 -0.0426565
FNDC3B fibronectin type III domain containing 3B -0.0423573
NRCAM neuronal cell adhesion molecule -0.0420543
TMSB10 thymosin beta 10 -0.0403333
P3H2 prolyl 3-hydroxylase 2 -0.0401933
PTMA prothymosin, alpha -0.0400854
RPS6 ribosomal protein S6 -0.0396279
VCL vinculin -0.0395229
MFF mitochondrial fission factor -0.039342
TFPI2 tissue factor pathway inhibitor 2 -0.0391244
PALLD palladin, cytoskeletal associated protein -0.039065
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0388831
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0386816
RPLP0 ribosomal protein, large, P0 -0.0381719
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0379948
NEK7 NIMA-related kinase 7 -0.037619
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.037522
ZEB2 zinc finger E-box binding homeobox 2 -0.0366298
PDIA3 protein disulfide isomerase family A, member 3 -0.035868
PRKN parkin RBR E3 ubiquitin protein ligase -0.0355841
RPLP1 ribosomal protein, large, P1 -0.0346485
MAML3 mastermind-like 3 (Drosophila) -0.0345352
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0341636
EPB41L3 erythrocyte membrane protein band 4.1-like 3 -0.0341267
CD109 CD109 molecule -0.0341083
PTEN phosphatase and tensin homolog -0.0337386
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0320819
ANTXR1 anthrax toxin receptor 1 -0.0314143
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 -0.0305085
GRAMD1B GRAM domain containing 1B -0.0298524
BASP1 brain abundant, membrane attached signal protein 1 -0.0296137
COL4A6 collagen, type IV, alpha 6 -0.0285938
PDE3A phosphodiesterase 3A, cGMP-inhibited -0.0283237
CTSC cathepsin C -0.0282833
LOC112694756 uncharaterized LOC112694756 -0.0263187
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0260018
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0258859
DPP10 dipeptidyl-peptidase 10 (non-functional) -0.0255175
PFN1 profilin 1 -0.0254724
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0253285
S100A6 S100 calcium binding protein A6 -0.0252684
RTN4 reticulon 4 -0.0252117
PBX1 pre-B-cell leukemia homeobox 1 -0.025079
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.025074
ACTG1 actin gamma 1 -0.0249194
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.0247787
RPL35A ribosomal protein L35a -0.0245927
VDAC1 voltage-dependent anion channel 1 -0.0245646
ENAH enabled homolog (Drosophila) -0.0240741
SH3KBP1 SH3-domain kinase binding protein 1 -0.0237492
SLC44A1 solute carrier family 44 (choline transporter), member 1 -0.0237453
JMJD1C jumonji domain containing 1C -0.0236562
NTN4 netrin 4 -0.0234485
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 -0.0231652
DOCK5 dedicator of cytokinesis 5 -0.0230953
RPS23 ribosomal protein S23 -0.0230397
PRKAA2 protein kinase, AMP-activated, alpha 2 catalytic subunit -0.0228714
DPYD dihydropyrimidine dehydrogenase -0.0227948
MAP3K20 mitogen-activated protein kinase kinase kinase 20 -0.0226408
FNDC3A fibronectin type III domain containing 3A -0.0225594