Bestatin_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bestatin perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bestatin_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0876338
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0737024
MKI67 marker of proliferation Ki-67 0.0626918
CENPF centromere protein F, 350/400kDa 0.0572018
CKAP2 cytoskeleton associated protein 2 0.0515392
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.047397
TPX2 TPX2, microtubule-associated 0.0435376
CENPE centromere protein E, 312kDa 0.0370472
DLGAP5 discs, large (Drosophila) homolog-associated protein 5 0.0367887
ANXA1 annexin A1 0.0329696
H2AZ2 H2A.Z variant histone 2 0.0306837
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0300089
PLS3 plastin 3 0.0271174
SMC4 structural maintenance of chromosomes 4 0.027091
USP1 ubiquitin specific peptidase 1 0.0265107
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0261705
RBM39 RNA binding motif protein 39 0.0256739
YBX1 Y box binding protein 1 0.0249236
TPM3 tropomyosin 3 0.0244418
TLN1 talin 1 0.0240639
CALU calumenin 0.0240079
TTK TTK protein kinase 0.0236285
LPCAT1 lysophosphatidylcholine acyltransferase 1 0.0236226
G3BP2 GTPase activating protein (SH3 domain) binding protein 2 0.0227873
PNN pinin, desmosome associated protein 0.022499
STIL SCL/TAL1 interrupting locus 0.0224289
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0224047
DBF4 DBF4 zinc finger 0.0221958
ANXA5 annexin A5 0.0219545
SUB1 SUB1 homolog (S. cerevisiae) 0.0218649
KNL1 kinetochore scaffold 1 0.021803
ZNF217 zinc finger protein 217 0.0217307
LUC7L2 LUC7-like 2 (S. cerevisiae) 0.0213076
PAICS phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase 0.021025
DIAPH3 diaphanous-related formin 3 0.0208819
KDM1A lysine (K)-specific demethylase 1A 0.0208784
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.0208656
NACA nascent polypeptide-associated complex alpha subunit 0.0205289
FBXO27 F-box protein 27 0.0204975
NUP155 nucleoporin 155kDa 0.0202425
PRRC2C proline-rich coiled-coil 2C 0.0201614
COPA coatomer protein complex, subunit alpha 0.0199491
GDI2 GDP dissociation inhibitor 2 0.0198947
RNMT RNA (guanine-7-) methyltransferase 0.0197482
BUB1 BUB1 mitotic checkpoint serine/threonine kinase 0.0196149
VCP valosin containing protein 0.0194665
BMP5 bone morphogenetic protein 5 0.0194318
RAB18 RAB18, member RAS oncogene family 0.0194124
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0193306
TOP6BL TOP6B like initiator of meiotic double strand breaks 0.0191749
COASY CoA synthase 0.0191182
MORF4L2 mortality factor 4 like 2 0.0191162
NDC80 NDC80 kinetochore complex component 0.0190531
PCM1 pericentriolar material 1 0.0190304
CDCA2 cell division cycle associated 2 0.0189967
SCARB2 scavenger receptor class B, member 2 0.0189532
BRD7 bromodomain containing 7 0.0188684
CANX calnexin 0.0187577
LTN1 listerin E3 ubiquitin protein ligase 1 0.0187507
KNTC1 kinetochore associated 1 0.0187455
MYBL2 v-myb avian myeloblastosis viral oncogene homolog-like 2 0.0186168
UCHL5 ubiquitin carboxyl-terminal hydrolase L5 0.0185074
STX16 syntaxin 16 0.0184227
IGF2R insulin-like growth factor 2 receptor 0.0183397
HMMR hyaluronan-mediated motility receptor (RHAMM) 0.0181886
PSMA6 proteasome (prosome, macropain) subunit, alpha type, 6 0.0181658
HMGB2 high mobility group box 2 0.018136
SPAG5 sperm associated antigen 5 0.0181034
ANLN anillin, actin binding protein 0.0180526
NUP58 nucleoporin 58 0.0180476
UBA2 ubiquitin-like modifier activating enzyme 2 0.0178287
KIF23 kinesin family member 23 0.0177303
PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 0.0176308
VTI1A vesicle transport through interaction with t-SNAREs 1A 0.0176053
SAMD4B sterile alpha motif domain containing 4B 0.0175734
PSMD7 proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 0.0175405
NDC1 NDC1 transmembrane nucleoporin 0.0174774
RPL5 ribosomal protein L5 0.0174548
ZMYM2 zinc finger, MYM-type 2 0.0173543
PPM1D protein phosphatase, Mg2+/Mn2+ dependent, 1D 0.0173393
ACBD3 acyl-CoA binding domain containing 3 0.0172956
ARHGAP11A Rho GTPase activating protein 11A 0.0172414
BUB1B BUB1 mitotic checkpoint serine/threonine kinase B 0.0172144
SQLE squalene epoxidase 0.0170702
KIF18A kinesin family member 18A 0.016823
BUB3 BUB3 mitotic checkpoint protein 0.0166634
PSMD2 proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 0.0166481
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0166458
RPS2 ribosomal protein S2 0.0166285
RPL21 ribosomal protein L21 0.0166268
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) 0.0166112
RPS4X ribosomal protein S4, X-linked 0.0165706
NDUFS6 NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase) 0.0165671
DYNLL1 dynein, light chain, LC8-type 1 0.0165645
SLK STE20-like kinase 0.0165634
NONO non-POU domain containing, octamer-binding 0.0165131
CAPN2 calpain 2, (m/II) large subunit 0.0163306
MYOZ2 myozenin 2 0.016218
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.016019
ECT2 epithelial cell transforming 2 0.0160107

decreased expression

Symbol Name Standardized Value
COL11A1 collagen, type XI, alpha 1 -0.169039
ERBB4 erb-b2 receptor tyrosine kinase 4 -0.164126
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.16256
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.147045
ADGRL2 adhesion G protein-coupled receptor L2 -0.140093
CDH10 cadherin 10, type 2 (T2-cadherin) -0.131917
CDH6 cadherin 6, type 2, K-cadherin (fetal kidney) -0.122169
CTNNA2 catenin (cadherin-associated protein), alpha 2 -0.117803
CADM2 cell adhesion molecule 2 -0.106576
TSC22D2 TSC22 domain family, member 2 -0.100002
BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 -0.0979244
PCLO piccolo presynaptic cytomatrix protein -0.0962825
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 -0.0926253
TENM3 teneurin transmembrane protein 3 -0.090552
FNDC3B fibronectin type III domain containing 3B -0.0901643
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.089858
ZFAND3 zinc finger, AN1-type domain 3 -0.088771
PHIP pleckstrin homology domain interacting protein -0.0855342
GPC3 glypican 3 -0.0837532
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0813072
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0790337
HS3ST5 heparan sulfate (glucosamine) 3-O-sulfotransferase 5 -0.078936
GALNTL6 polypeptide N-acetylgalactosaminyltransferase-like 6 -0.075051
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.0742882
ADGRL3 adhesion G protein-coupled receptor L3 -0.0712809
PGAP1 post-GPI attachment to proteins 1 -0.0674501
PARD3B par-3 family cell polarity regulator beta -0.0674375
SLIT2 slit homolog 2 (Drosophila) -0.0663841
MPG N-methylpurine-DNA glycosylase -0.0663197
PLPP1 phospholipid phosphatase 1 -0.0653056
TRIO trio Rho guanine nucleotide exchange factor -0.063494
IGF1R insulin-like growth factor 1 receptor -0.06347
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.061917
SOX5 SRY (sex determining region Y)-box 5 -0.0614991
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.060984
NCAM2 neural cell adhesion molecule 2 -0.0598078
LHFPL6 LHFPL tetraspan subfamily member 6 -0.0585101
RASAL2 RAS protein activator like 2 -0.0563663
ITGAV integrin, alpha V -0.0559963
TMSB10 thymosin beta 10 -0.0539177
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase -0.0523637
ADGRV1 adhesion G protein-coupled receptor V1 -0.0523089
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0516545
MAP4 microtubule-associated protein 4 -0.0495364
GNAS GNAS complex locus -0.0495062
ANKRD33B ankyrin repeat domain 33B -0.04941
ZEB2 zinc finger E-box binding homeobox 2 -0.0453909
MRPS30 mitochondrial ribosomal protein S30 -0.0452085
COL1A2 collagen, type I, alpha 2 -0.0446623
CDH19 cadherin 19, type 2 -0.0442549
DOCK5 dedicator of cytokinesis 5 -0.0438113
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.0436592
NRG1 neuregulin 1 -0.0430869
RBM20 RNA binding motif protein 20 -0.0422815
FBXO11 F-box protein 11 -0.0422587
UTRN utrophin -0.0422079
TRPS1 trichorhinophalangeal syndrome I -0.0421603
THBS1 thrombospondin 1 -0.0416571
PCDH7 protocadherin 7 -0.0416218
SEMA3E sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E -0.0415675
AHNAK AHNAK nucleoprotein -0.040905
NCOR2 nuclear receptor corepressor 2 -0.0406987
GAB2 GRB2-associated binding protein 2 -0.04035
ZNF292 zinc finger protein 292 -0.0397185
PFN1 profilin 1 -0.0392718
MDK midkine (neurite growth-promoting factor 2) -0.0392548
TNRC6B trinucleotide repeat containing 6B -0.0391425
PTMA prothymosin, alpha -0.0388134
LAMC1 laminin, gamma 1 (formerly LAMB2) -0.0386555
PDE3A phosphodiesterase 3A, cGMP-inhibited -0.0386456
OSBPL10 oxysterol binding protein-like 10 -0.0385247
TENM2 teneurin transmembrane protein 2 -0.0384703
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.0383797
NHSL1 NHS-like 1 -0.03835
TRAK1 trafficking protein, kinesin binding 1 -0.0382913
RPL35A ribosomal protein L35a -0.0382688
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0380839
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0379715
FOXO1 forkhead box O1 -0.0377098
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.037604
MED12L mediator complex subunit 12-like -0.0374191
PDE4D phosphodiesterase 4D, cAMP-specific -0.0371673
RPS27A ribosomal protein S27a -0.0370752
SLC44A5 solute carrier family 44, member 5 -0.0370613
MAML2 mastermind-like 2 (Drosophila) -0.0370102
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0367777
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0366447
LPIN2 lipin 2 -0.0364654
KMT2E lysine (K)-specific methyltransferase 2E -0.0361923
VIM vimentin -0.0357718
SRPK2 SRSF protein kinase 2 -0.0357577
PPP1R12A protein phosphatase 1, regulatory subunit 12A -0.035542
ZFPM2 zinc finger protein, FOG family member 2 -0.0352002
RAD51B RAD51 paralog B -0.0350395
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 -0.0349644
HMCN1 hemicentin 1 -0.0349048
GREB1L growth regulation by estrogen in breast cancer-like -0.0348623
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.034511
JMJD1C jumonji domain containing 1C -0.034408
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha -0.0343078