Bestatin_SW 1088 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bestatin perturbation in SW 1088 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bestatin_SW 1088 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.070531
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0657166
FAM13A family with sequence similarity 13, member A 0.0573425
TENT5A terminal nucleotidyltransferase 5A 0.0566075
VEGFA vascular endothelial growth factor A 0.0543484
ARRDC3 arrestin domain containing 3 0.0524822
MYH9 myosin, heavy chain 9, non-muscle 0.0500087
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0474132
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0465321
FNDC3B fibronectin type III domain containing 3B 0.0460214
UBA6 ubiquitin-like modifier activating enzyme 6 0.0430649
B2M beta-2-microglobulin 0.0415811
ZMIZ1 zinc finger, MIZ-type containing 1 0.0408406
DPYSL2 dihydropyrimidinase-like 2 0.0407305
UBE2D3 ubiquitin-conjugating enzyme E2D 3 0.0403065
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0403015
ACTR2 ARP2 actin-related protein 2 homolog (yeast) 0.0396901
CALR calreticulin 0.0380236
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0351199
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.034801
PHF21A PHD finger protein 21A 0.034758
FAM13B family with sequence similarity 13, member B 0.0341077
DDIT4 DNA-damage-inducible transcript 4 0.0331986
RAD51B RAD51 paralog B 0.0330223
MIER1 mesoderm induction early response 1, transcriptional regulator 0.032885
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0321791
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0320389
MORF4L2 mortality factor 4 like 2 0.0320352
DSTN destrin (actin depolymerizing factor) 0.0316246
MSN moesin 0.0312048
CANX calnexin 0.0301875
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0298183
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0297855
FXR1 fragile X mental retardation, autosomal homolog 1 0.0295698
ZCCHC7 zinc finger, CCHC domain containing 7 0.0294131
PDIA3 protein disulfide isomerase family A, member 3 0.0289274
TRA2B transformer 2 beta homolog (Drosophila) 0.028913
APAF1 apoptotic peptidase activating factor 1 0.0283387
RNF145 ring finger protein 145 0.0281462
RPS8 ribosomal protein S8 0.0278957
RACK1 receptor for activated C kinase 1 0.0277593
CHCHD2 coiled-coil-helix-coiled-coil-helix domain containing 2 0.0271666
TNKS2 tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2 0.0267938
RAB8B RAB8B, member RAS oncogene family 0.0265844
FTL ferritin, light polypeptide 0.0260477
PRRC2C proline-rich coiled-coil 2C 0.0259821
PEAK1 pseudopodium-enriched atypical kinase 1 0.0259669
PDE8A phosphodiesterase 8A 0.0257333
CAMTA1 calmodulin binding transcription activator 1 0.0255888
GNAS GNAS complex locus 0.0254785
CXCL8 chemokine (C-X-C motif) ligand 8 0.0254602
RNF216 ring finger protein 216 0.0253832
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.0253256
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0251733
MXI1 MAX interactor 1, dimerization protein 0.0248009
SEM1 SEM1 26S proteasome subunit 0.0246794
PTN pleiotrophin 0.0246728
ARMC9 armadillo repeat containing 9 0.0245254
ARHGAP35 Rho GTPase activating protein 35 0.0244673
SERINC1 serine incorporator 1 0.0244438
MCL1 myeloid cell leukemia 1 0.0242179
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 0.0241674
GRB10 growth factor receptor-bound protein 10 0.0239805
NDRG1 N-myc downstream regulated 1 0.023952
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0239062
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0239061
HYOU1 hypoxia up-regulated 1 0.0238671
HSD17B12 hydroxysteroid (17-beta) dehydrogenase 12 0.0237994
KIF5B kinesin family member 5B 0.0237083
RAB18 RAB18, member RAS oncogene family 0.0236586
RPL12 ribosomal protein L12 0.0236371
NALF1 NALCN channel auxiliary factor 1 0.0234252
COPB1 coatomer protein complex, subunit beta 1 0.0233092
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) 0.0232303
PRKD3 protein kinase D3 0.0231994
PDIA6 protein disulfide isomerase family A, member 6 0.0231477
HDGF hepatoma-derived growth factor 0.0230637
FKBP1A FK506 binding protein 1A, 12kDa 0.0230426
NEMF nuclear export mediator factor 0.0229973
CCT6A chaperonin containing TCP1, subunit 6A (zeta 1) 0.0227499
POLR2B polymerase (RNA) II (DNA directed) polypeptide B, 140kDa 0.0226911
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa 0.0226094
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0225823
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 0.0225659
NRBP1 nuclear receptor binding protein 1 0.022557
UGCG UDP-glucose ceramide glucosyltransferase 0.0224643
FLNB filamin B, beta 0.0224465
MAP4K3 mitogen-activated protein kinase kinase kinase kinase 3 0.0224318
IL6 interleukin 6 0.0222645
FMNL2 formin-like 2 0.0222546
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0221947
CCDC186 coiled-coil domain containing 186 0.022192
VPS13B vacuolar protein sorting 13 homolog B (yeast) 0.0221088
PDIA4 protein disulfide isomerase family A, member 4 0.0220136
MEF2D myocyte enhancer factor 2D 0.022005
NME7 NME/NM23 family member 7 0.021967
ELP2 elongator acetyltransferase complex subunit 2 0.0219132
TMEM167A transmembrane protein 167A 0.0215856
NAMPT nicotinamide phosphoribosyltransferase 0.0214633
SKIC3 SKI3 subunit of superkiller complex 0.0211091

decreased expression

Symbol Name Standardized Value
TGFBI transforming growth factor, beta-induced, 68kDa -0.165516
COL6A3 collagen, type VI, alpha 3 -0.143524
HLA-B major histocompatibility complex, class I, B -0.130307
TMSB10 thymosin beta 10 -0.125597
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.123579
LOX lysyl oxidase -0.110429
GLIS3 GLIS family zinc finger 3 -0.084663
AHNAK AHNAK nucleoprotein -0.0807854
HMGA2 high mobility group AT-hook 2 -0.0784861
CALD1 caldesmon 1 -0.0782081
VCL vinculin -0.0736738
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0706622
CDK6 cyclin-dependent kinase 6 -0.0706617
COL6A2 collagen, type VI, alpha 2 -0.0688728
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 -0.0655059
SRPK2 SRSF protein kinase 2 -0.0633503
LOXL2 lysyl oxidase-like 2 -0.0629477
PPP6R3 protein phosphatase 6, regulatory subunit 3 -0.0616899
MAP1B microtubule-associated protein 1B -0.0589845
HIP1 huntingtin interacting protein 1 -0.0577494
OGA O-GlcNAcase -0.0570099
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0543707
RAI14 retinoic acid induced 14 -0.05393
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0538785
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 -0.0535029
PRSS23 protease, serine, 23 -0.0533174
RASAL2 RAS protein activator like 2 -0.0533158
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0520355
CAV1 caveolin 1, caveolae protein, 22kDa -0.0513307
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0490993
ZEB2 zinc finger E-box binding homeobox 2 -0.047997
ANKIB1 ankyrin repeat and IBR domain containing 1 -0.0474487
IGFBP7 insulin-like growth factor binding protein 7 -0.0465837
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0455807
COL5A1 collagen, type V, alpha 1 -0.04519
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 -0.0448508
MAPK8 mitogen-activated protein kinase 8 -0.0447343
CDH13 cadherin 13 -0.0445458
VIM vimentin -0.0444059
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0440942
AHR aryl hydrocarbon receptor -0.0439183
LOC112694756 uncharaterized LOC112694756 -0.0438038
ANXA2 annexin A2 -0.0436439
NRP1 neuropilin 1 -0.0435574
NRXN3 neurexin 3 -0.0432131
RPL35A ribosomal protein L35a -0.0428245
RRBP1 ribosome binding protein 1 -0.0427826
IQGAP1 IQ motif containing GTPase activating protein 1 -0.0421858
SEC31A SEC31 homolog A (S. cerevisiae) -0.041667
CUL3 cullin 3 -0.041552
FAF1 Fas (TNFRSF6) associated factor 1 -0.0415085
TPT1 tumor protein, translationally-controlled 1 -0.0413025
ZSWIM6 zinc finger, SWIM-type containing 6 -0.040558
USP34 ubiquitin specific peptidase 34 -0.0405471
SMAD3 SMAD family member 3 -0.0404733
FNDC3A fibronectin type III domain containing 3A -0.0404352
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0404239
HP1BP3 heterochromatin protein 1, binding protein 3 -0.0403209
RPS6KC1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 -0.0402492
FSCN1 fascin actin-bundling protein 1 -0.0401998
TAGLN2 transgelin 2 -0.0394265
MT1X metallothionein 1X -0.0393564
RTN4 reticulon 4 -0.0391767
HIPK2 homeodomain interacting protein kinase 2 -0.0391342
ANKRD12 ankyrin repeat domain 12 -0.0382959
NKTR natural killer cell triggering receptor -0.0381591
MBD5 methyl-CpG binding domain protein 5 -0.0378813
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0377638
CADM1 cell adhesion molecule 1 -0.037674
SCAF11 SR-related CTD-associated factor 11 -0.0375802
APLP2 amyloid beta (A4) precursor-like protein 2 -0.0373529
AOPEP aminopeptidase O (putative) -0.0371268
ALK anaplastic lymphoma receptor tyrosine kinase -0.0365297
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0361215
MON2 MON2 homolog (S. cerevisiae) -0.0360937
TIMP3 TIMP metallopeptidase inhibitor 3 -0.0359016
BRAF B-Raf proto-oncogene, serine/threonine kinase -0.0359014
RAB7A RAB7A, member RAS oncogene family -0.0358467
EFNA5 ephrin-A5 -0.03546
WWTR1 WW domain containing transcription regulator 1 -0.0353633
MEF2A myocyte enhancer factor 2A -0.0352678
ASPH aspartate beta-hydroxylase -0.0349354
PMM2 phosphomannomutase 2 -0.0346091
PTPN1 protein tyrosine phosphatase, non-receptor type 1 -0.0343279
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0342522
AKAP9 A kinase (PRKA) anchor protein 9 -0.0341846
KMT2C lysine (K)-specific methyltransferase 2C -0.034102
PALLD palladin, cytoskeletal associated protein -0.0340133
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -0.0339845
FAM20C family with sequence similarity 20, member C -0.0337329
OSMR oncostatin M receptor -0.0335307
PIK3R1 phosphoinositide-3-kinase, regulatory subunit 1 (alpha) -0.0335148
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0335016
TPM4 tropomyosin 4 -0.0333295
IGFBP3 insulin-like growth factor binding protein 3 -0.0330872
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0330547
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.0329548
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0329001
MAP4 microtubule-associated protein 4 -0.0328962
UBE2H ubiquitin-conjugating enzyme E2H -0.0328447