Bestatin_SW 1271 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bestatin perturbation in SW 1271 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bestatin_SW 1271 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SPAG9 sperm associated antigen 9 0.0585352
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa 0.05611
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0478388
NUP58 nucleoporin 58 0.0467226
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0465665
TRA2A transformer 2 alpha homolog (Drosophila) 0.0437192
ECT2 epithelial cell transforming 2 0.04154
HELZ helicase with zinc finger 0.0410238
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0399937
KMT2E lysine (K)-specific methyltransferase 2E 0.0363011
PDE4D phosphodiesterase 4D, cAMP-specific 0.0340899
SNX14 sorting nexin 14 0.033828
MIS18BP1 MIS18 binding protein 1 0.0334788
RPLP1 ribosomal protein, large, P1 0.0331401
MORF4L2 mortality factor 4 like 2 0.0324501
PNN pinin, desmosome associated protein 0.0324488
GOLGA4 golgin A4 0.0317074
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0304936
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0296926
RBM39 RNA binding motif protein 39 0.0296514
NAMPT nicotinamide phosphoribosyltransferase 0.029546
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0294963
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0292708
PDPK1 3-phosphoinositide dependent protein kinase 1 0.0289772
SET SET nuclear proto-oncogene 0.0286646
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0280317
SRP54 signal recognition particle 54kDa 0.0277198
DGKD diacylglycerol kinase, delta 130kDa 0.0275602
COG5 component of oligomeric golgi complex 5 0.0268564
WDR43 WD repeat domain 43 0.0267944
CXCL8 chemokine (C-X-C motif) ligand 8 0.0267485
PHC3 polyhomeotic homolog 3 (Drosophila) 0.0264559
WAC WW domain containing adaptor with coiled-coil 0.0263315
CEP295 centrosomal protein 295kDa 0.0263133
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0262461
NR1D2 nuclear receptor subfamily 1, group D, member 2 0.0262013
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0261641
SEC24A SEC24 family member A 0.0259752
RPL23 ribosomal protein L23 0.0258012
ARF4 ADP-ribosylation factor 4 0.0255782
MKI67 marker of proliferation Ki-67 0.0254951
RAB1A RAB1A, member RAS oncogene family 0.0254211
NOP58 NOP58 ribonucleoprotein 0.0254117
RACK1 receptor for activated C kinase 1 0.024526
RPL11 ribosomal protein L11 0.024338
PNPLA8 patatin-like phospholipase domain containing 8 0.02423
SBNO1 strawberry notch homolog 1 (Drosophila) 0.023965
WDR45B WD repeat domain 45B 0.0235529
RPL36 ribosomal protein L36 0.0234592
RPS17 ribosomal protein S17 0.0234408
RPL12 ribosomal protein L12 0.0232696
MAP2K1 mitogen-activated protein kinase kinase 1 0.0231628
PTPN11 protein tyrosine phosphatase, non-receptor type 11 0.0230247
RPL35 ribosomal protein L35 0.022982
FOXJ3 forkhead box J3 0.0228544
PRPF39 pre-mRNA processing factor 39 0.0228256
SFXN1 sideroflexin 1 0.022818
TFRC transferrin receptor 0.0226023
TUBB tubulin, beta class I 0.0225457
PAIP2 poly(A) binding protein interacting protein 2 0.0225406
TNRC6A trinucleotide repeat containing 6A 0.0223878
DDIT4 DNA-damage-inducible transcript 4 0.0223698
ATP13A3 ATPase type 13A3 0.0220501
YBX1 Y box binding protein 1 0.0220111
TFG TRK-fused gene 0.021913
SIN3A SIN3 transcription regulator family member A 0.0218247
KIF20B kinesin family member 20B 0.0216125
CEP192 centrosomal protein 192kDa 0.0216059
HSPA8 heat shock 70kDa protein 8 0.0214488
AFTPH aftiphilin 0.020989
MATR3 matrin 3 0.0209379
CLINT1 clathrin interactor 1 0.0208712
SURF4 surfeit 4 0.0207827
DIAPH3 diaphanous-related formin 3 0.0207668
MED17 mediator complex subunit 17 0.0207262
NONO non-POU domain containing, octamer-binding 0.0206351
EIF1 eukaryotic translation initiation factor 1 0.0204812
RPS2 ribosomal protein S2 0.0204468
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 0.020427
CHD1 chromodomain helicase DNA binding protein 1 0.0204151
TEX10 testis expressed 10 0.0203541
CKAP2L cytoskeleton associated protein 2-like 0.0202578
MRPL3 mitochondrial ribosomal protein L3 0.0201921
ZBTB11 zinc finger and BTB domain containing 11 0.0201762
SSR1 signal sequence receptor, alpha 0.020173
XPO1 exportin 1 0.0200424
CCDC88A coiled-coil domain containing 88A 0.0199245
KPNB1 karyopherin (importin) beta 1 0.0198528
ALG9 ALG9, alpha-1,2-mannosyltransferase 0.0198516
EIF2AK3 eukaryotic translation initiation factor 2-alpha kinase 3 0.019824
NCOA6 nuclear receptor coactivator 6 0.0198053
RAB6A RAB6A, member RAS oncogene family 0.0197321
CIRSR corepressor of RBPJ and splicing regulator 0.0197152
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0194588
AFF4 AF4/FMR2 family, member 4 0.0193858
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0193819
SMC3 structural maintenance of chromosomes 3 0.0193691
ATP5F1E ATP synthase F1 subunit epsilon 0.0192236
SEC23A Sec23 homolog A (S. cerevisiae) 0.0191905
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0191705

decreased expression

Symbol Name Standardized Value
FNDC3B fibronectin type III domain containing 3B -0.138844
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.123931
HMGA2 high mobility group AT-hook 2 -0.122374
CD44 CD44 molecule (Indian blood group) -0.0992269
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0983707
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0948749
PRKCA protein kinase C, alpha -0.0945226
ZBTB20 zinc finger and BTB domain containing 20 -0.094522
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0856951
TMSB10 thymosin beta 10 -0.0819263
MACF1 microtubule-actin crosslinking factor 1 -0.079948
ATXN1 ataxin 1 -0.0780122
AHNAK AHNAK nucleoprotein -0.0762824
INTS6 integrator complex subunit 6 -0.075891
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0754597
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0732446
IGFBP3 insulin-like growth factor binding protein 3 -0.0731289
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0705754
ATM ATM serine/threonine kinase -0.0674344
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.067087
DST dystonin -0.0666025
SLC38A2 solute carrier family 38, member 2 -0.0654396
SVIL supervillin -0.0643394
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0642807
VIM vimentin -0.0636286
DPYD dihydropyrimidine dehydrogenase -0.0624802
LOC112694756 uncharaterized LOC112694756 -0.0611096
RIGI RNA sensor RIG-I -0.0599985
LDHA lactate dehydrogenase A -0.0599552
VCL vinculin -0.0599395
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0591866
ATG7 autophagy related 7 -0.0565951
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 -0.0563068
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.055508
ARHGEF28 Rho guanine nucleotide exchange factor (GEF) 28 -0.0545551
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0544695
N4BP2L2 NEDD4 binding protein 2-like 2 -0.053341
PALM2AKAP2 PALM2 and AKAP2 fusion -0.0532962
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats -0.052427
GPC6 glypican 6 -0.0515431
FMN1 formin 1 -0.0504051
EGFR epidermal growth factor receptor -0.0498206
PRSS23 protease, serine, 23 -0.049087
ASPH aspartate beta-hydroxylase -0.0484113
NALCN sodium leak channel, non selective -0.0477822
EFNA5 ephrin-A5 -0.0476648
NT5E 5'-nucleotidase, ecto (CD73) -0.047471
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0468961
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0467583
SMYD3 SET and MYND domain containing 3 -0.0443667
BICD1 bicaudal D homolog 1 (Drosophila) -0.0442199
MBD5 methyl-CpG binding domain protein 5 -0.0435279
PCED1B PC-esterase domain containing 1B -0.0434663
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0428251
PBX3 pre-B-cell leukemia homeobox 3 -0.042825
RAI14 retinoic acid induced 14 -0.0426719
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0426658
PRR16 proline rich 16 -0.0424276
RAD51B RAD51 paralog B -0.0420012
ANO6 anoctamin 6 -0.0419723
FLNB filamin B, beta -0.0418068
SAMD4A sterile alpha motif domain containing 4A -0.0417252
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) -0.0415398
FMNL2 formin-like 2 -0.0414037
NEDD4 neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase -0.0403007
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0400942
ZNF609 zinc finger protein 609 -0.0399325
IL1RAP interleukin 1 receptor accessory protein -0.0394137
TAS2R14 taste receptor, type 2, member 14 -0.0393486
PTK2 protein tyrosine kinase 2 -0.0390287
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0388706
ANXA2 annexin A2 -0.0387949
DSCAM Down syndrome cell adhesion molecule -0.0386937
ETV6 ets variant 6 -0.0385207
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0381781
PHF3 PHD finger protein 3 -0.0375427
RALY RALY heterogeneous nuclear ribonucleoprotein -0.0371411
THSD4 thrombospondin, type I, domain containing 4 -0.0370756
PCNX4 pecanex 4 -0.0369872
HDAC9 histone deacetylase 9 -0.0369456
PKM pyruvate kinase, muscle -0.0366809
ITGAV integrin, alpha V -0.036273
PARD3 par-3 family cell polarity regulator -0.0362019
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0357538
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.0353634
OSMR oncostatin M receptor -0.0353321
SH3KBP1 SH3-domain kinase binding protein 1 -0.0351814
TRPC1 transient receptor potential cation channel, subfamily C, member 1 -0.0349015
AKAP13 A kinase (PRKA) anchor protein 13 -0.0341798
CANX calnexin -0.0335602
WWOX WW domain containing oxidoreductase -0.033423
ERC1 ELKS/RAB6-interacting/CAST family member 1 -0.0333404
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0332116
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0331396
MYO9A myosin IXA -0.0327652
ANGPTL4 angiopoietin-like 4 -0.0327152
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0326632
AEBP2 AE binding protein 2 -0.0325433
FBXL17 F-box and leucine-rich repeat protein 17 -0.032433
DHX34 DEAH (Asp-Glu-Ala-His) box polypeptide 34 -0.0324175