Bestatin_SW 900 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bestatin perturbation in SW 900 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bestatin_SW 900 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0645384
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0514345
NRIP1 nuclear receptor interacting protein 1 0.0327132
GPC6 glypican 6 0.0327074
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0308177
IGFBP3 insulin-like growth factor binding protein 3 0.0303787
HMGA2 high mobility group AT-hook 2 0.0281775
WDR26 WD repeat domain 26 0.0267697
FLNB filamin B, beta 0.0255054
NDRG1 N-myc downstream regulated 1 0.0254394
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.02291
EFNA5 ephrin-A5 0.0224096
ERRFI1 ERBB receptor feedback inhibitor 1 0.0222907
SMYD3 SET and MYND domain containing 3 0.0216601
FBXL5 F-box and leucine-rich repeat protein 5 0.0216048
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0214863
LIMCH1 LIM and calponin homology domains 1 0.0213728
LPCAT1 lysophosphatidylcholine acyltransferase 1 0.0212514
SOS1 son of sevenless homolog 1 (Drosophila) 0.020995
BABAM2 BRISC and BRCA1 A complex member 2 0.0207717
MAML2 mastermind-like 2 (Drosophila) 0.0205888
MTR 5-methyltetrahydrofolate-homocysteine methyltransferase 0.0204852
GOLPH3 golgi phosphoprotein 3 (coat-protein) 0.0197086
DOCK5 dedicator of cytokinesis 5 0.0194986
ENO2 enolase 2 (gamma, neuronal) 0.0194473
SPRED1 sprouty-related, EVH1 domain containing 1 0.0185339
UBA6 ubiquitin-like modifier activating enzyme 6 0.0183068
PRELID2 PRELI domain containing 2 0.018247
NAV2 neuron navigator 2 0.0179318
ZBTB20 zinc finger and BTB domain containing 20 0.0179115
RAD51B RAD51 paralog B 0.0177799
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0173778
MEF2D myocyte enhancer factor 2D 0.0170401
FAM219A family with sequence similarity 219, member A 0.01704
FER fer (fps/fes related) tyrosine kinase 0.0169968
ANGPTL4 angiopoietin-like 4 0.0169796
SSH1 slingshot protein phosphatase 1 0.0166834
LUC7L2 LUC7-like 2 (S. cerevisiae) 0.0166671
LOXL2 lysyl oxidase-like 2 0.0165806
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) 0.0164885
PLAUR plasminogen activator, urokinase receptor 0.0164287
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.016334
GRB10 growth factor receptor-bound protein 10 0.0160144
ANKRD11 ankyrin repeat domain 11 0.0160117
PRPF8 pre-mRNA processing factor 8 0.0160043
ZMIZ1 zinc finger, MIZ-type containing 1 0.0158706
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0158412
SP3 Sp3 transcription factor 0.015648
SMOX spermine oxidase 0.01555
MYH9 myosin, heavy chain 9, non-muscle 0.0147708
NPC1 Niemann-Pick disease, type C1 0.0144884
SS18 synovial sarcoma translocation, chromosome 18 0.0144219
STC2 stanniocalcin 2 0.0143931
EGFR epidermal growth factor receptor 0.0142297
SKAP2 src kinase associated phosphoprotein 2 0.0142157
PCBP2 poly(rC) binding protein 2 0.0141733
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.014105
TNRC6C trinucleotide repeat containing 6C 0.0140885
VEGFC vascular endothelial growth factor C 0.0139723
SCFD2 sec1 family domain containing 2 0.013916
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.0137712
LPP LIM domain containing preferred translocation partner in lipoma 0.0137485
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0136341
SHB Src homology 2 domain containing adaptor protein B 0.0133045
LRP5 low density lipoprotein receptor-related protein 5 0.0132932
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 0.0132416
TBC1D22A TBC1 domain family, member 22A 0.0132227
ATXN1 ataxin 1 0.0130407
PTPN1 protein tyrosine phosphatase, non-receptor type 1 0.0130289
PLPP3 phospholipid phosphatase 3 0.0129715
PNN pinin, desmosome associated protein 0.0128576
NIBAN2 niban apoptosis regulator 2 0.012663
SCAF8 SR-related CTD-associated factor 8 0.0126415
BBX bobby sox homolog (Drosophila) 0.0125063
PCM1 pericentriolar material 1 0.0123927
CDK19 cyclin-dependent kinase 19 0.0123927
CREBBP CREB binding protein 0.0123757
TNS3 tensin 3 0.0122703
SYNJ2 synaptojanin 2 0.0122142
ACTN1 actinin, alpha 1 0.0121722
TSC22D1 TSC22 domain family, member 1 0.0121299
NALF1 NALCN channel auxiliary factor 1 0.0121293
ESCO1 establishment of sister chromatid cohesion N-acetyltransferase 1 0.0121137
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0120866
PDGFC platelet derived growth factor C 0.0120502
MSN moesin 0.0120192
NAV1 neuron navigator 1 0.0119583
METTL15 methyltransferase like 15 0.0117349
PLPP6 phospholipid phosphatase 6 0.0115938
USP34 ubiquitin specific peptidase 34 0.0115647
TGFA transforming growth factor, alpha 0.0115396
KDM4C lysine (K)-specific demethylase 4C 0.0114271
TRA2B transformer 2 beta homolog (Drosophila) 0.0113733
VCAN versican 0.0113384
FBXO32 F-box protein 32 0.0112973
SH3RF1 SH3 domain containing ring finger 1 0.0112773
DNMBP dynamin binding protein 0.0112308
GPAT3 glycerol-3-phosphate acyltransferase 3 0.0112135
SAMD4A sterile alpha motif domain containing 4A 0.0111943
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0111915

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.395415
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) -0.211446
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.209608
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.195786
CXCL8 chemokine (C-X-C motif) ligand 8 -0.169185
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.158845
PTMA prothymosin, alpha -0.117408
CANX calnexin -0.114097
FTH1 ferritin, heavy polypeptide 1 -0.113618
NAMPT nicotinamide phosphoribosyltransferase -0.104289
SQSTM1 sequestosome 1 -0.0953003
HLA-B major histocompatibility complex, class I, B -0.0832807
VIM vimentin -0.0819093
S100A6 S100 calcium binding protein A6 -0.0790531
LMNA lamin A/C -0.0756514
TMSB4X thymosin beta 4, X-linked -0.0727753
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0716698
TPT1 tumor protein, translationally-controlled 1 -0.0694967
FTL ferritin, light polypeptide -0.0691889
FN1 fibronectin 1 -0.0655583
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0612901
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0601077
H1-0 H1.0 linker histone -0.0567696
B2M beta-2-microglobulin -0.0556836
RAD21 RAD21 homolog (S. pombe) -0.0549775
RPL35A ribosomal protein L35a -0.0545815
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.053936
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0531242
RPL26 ribosomal protein L26 -0.0528371
GNAS GNAS complex locus -0.0509051
NAP1L1 nucleosome assembly protein 1-like 1 -0.0508947
RPLP1 ribosomal protein, large, P1 -0.0504983
LCORL ligand dependent nuclear receptor corepressor-like -0.0499777
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0499116
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.049481
LOC112694756 uncharaterized LOC112694756 -0.0482751
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 -0.047863
RPS20 ribosomal protein S20 -0.0472598
SOD2 superoxide dismutase 2, mitochondrial -0.0467725
BHLHE40 basic helix-loop-helix family, member e40 -0.0464596
RPS24 ribosomal protein S24 -0.0436421
ASPH aspartate beta-hydroxylase -0.0434539
QKI QKI, KH domain containing, RNA binding -0.0429168
TFPI2 tissue factor pathway inhibitor 2 -0.0418328
KDM3A lysine (K)-specific demethylase 3A -0.0417554
S100A10 S100 calcium binding protein A10 -0.0413305
UGDH UDP-glucose 6-dehydrogenase -0.0411486
IER3 immediate early response 3 -0.0409775
MT2A metallothionein 2A -0.0404205
WAC WW domain containing adaptor with coiled-coil -0.0398895
TMSB10 thymosin beta 10 -0.0397718
HILPDA hypoxia inducible lipid droplet-associated -0.0396241
NCOA7 nuclear receptor coactivator 7 -0.0392104
TMEM263 transmembrane protein 263 -0.039137
RPS21 ribosomal protein S21 -0.0390093
IFI27 interferon, alpha-inducible protein 27 -0.0389794
ANKRD28 ankyrin repeat domain 28 -0.038628
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0385774
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) -0.0381259
MARCHF6 membrane associated ring-CH-type finger 6 -0.0376942
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta -0.0374102
BZW1 basic leucine zipper and W2 domains 1 -0.0368192
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0362961
EREG epiregulin -0.0362599
RAB1A RAB1A, member RAS oncogene family -0.0355776
RPS6 ribosomal protein S6 -0.0352554
LOC102724023 ES1 protein homolog, mitochondrial -0.0349564
OSBPL8 oxysterol binding protein-like 8 -0.0346183
YBX3 Y box binding protein 3 -0.0345539
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.0344501
RACK1 receptor for activated C kinase 1 -0.0342602
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0334876
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.033435
TXNIP thioredoxin interacting protein -0.0332116
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0330598
RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic) -0.032895
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0327474
RPS27A ribosomal protein S27a -0.0323589
DNM1L dynamin 1-like -0.0321587
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0320884
FOS FBJ murine osteosarcoma viral oncogene homolog -0.0319127
RBM39 RNA binding motif protein 39 -0.0316585
RPLP0 ribosomal protein, large, P0 -0.031444
RPS19 ribosomal protein S19 -0.0312063
ARF1 ADP-ribosylation factor 1 -0.0309518
DENND5B DENN/MADD domain containing 5B -0.0309325
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.03085
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0307017
EMP1 epithelial membrane protein 1 -0.0305324
DNAJC1 DnaJ (Hsp40) homolog, subfamily C, member 1 -0.03025
SLC38A1 solute carrier family 38, member 1 -0.0299773
EXT1 exostosin glycosyltransferase 1 -0.0299614
COPA coatomer protein complex, subunit alpha -0.029852
RPL28 ribosomal protein L28 -0.0296766
RLF rearranged L-myc fusion -0.029675
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon -0.0296549
USP3 ubiquitin specific peptidase 3 -0.0294301
NIPBL Nipped-B homolog (Drosophila) -0.0293555
RAB7A RAB7A, member RAS oncogene family -0.0292816
RPL19 ribosomal protein L19 -0.0290863