Betamethasone dipropionate_HOP62 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Betamethasone dipropionate perturbation in HOP62 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Betamethasone dipropionate_HOP62 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FN1 fibronectin 1 0.447203
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.261672
MT2A metallothionein 2A 0.176841
AKAP12 A kinase (PRKA) anchor protein 12 0.0978572
ABLIM3 actin binding LIM protein family, member 3 0.0825043
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0811979
ALCAM activated leukocyte cell adhesion molecule 0.0805611
FTH1 ferritin, heavy polypeptide 1 0.0796214
SH3RF3 SH3 domain containing ring finger 3 0.0790611
FKBP5 FK506 binding protein 5 0.0723582
LOX lysyl oxidase 0.0643075
FNDC3B fibronectin type III domain containing 3B 0.0620305
TMSB10 thymosin beta 10 0.0601235
LDHA lactate dehydrogenase A 0.0600428
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0529558
PCBP3 poly(rC) binding protein 3 0.052643
MYH9 myosin, heavy chain 9, non-muscle 0.0514486
ANKRD28 ankyrin repeat domain 28 0.0502607
ZMYND8 zinc finger, MYND-type containing 8 0.0491663
PID1 phosphotyrosine interaction domain containing 1 0.0438334
MYOF myoferlin 0.0430335
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0430233
AKAP13 A kinase (PRKA) anchor protein 13 0.0421598
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0421204
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0418709
ENO1 enolase 1, (alpha) 0.0415992
CENPF centromere protein F, 350/400kDa 0.0404228
IRS2 insulin receptor substrate 2 0.0382418
ANGPTL4 angiopoietin-like 4 0.0379882
PCNX1 pecanex 1 0.037163
HMGB2 high mobility group box 2 0.0352654
HIPK2 homeodomain interacting protein kinase 2 0.0343687
STXBP5 syntaxin binding protein 5 (tomosyn) 0.0324716
AHNAK AHNAK nucleoprotein 0.031045
MT1E metallothionein 1E 0.0310315
TXNIP thioredoxin interacting protein 0.0302145
TNS3 tensin 3 0.0293176
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0291368
DNER delta/notch-like EGF repeat containing 0.0287687
TGFBR2 transforming growth factor, beta receptor II (70/80kDa) 0.0284988
TSC22D3 TSC22 domain family, member 3 0.0282279
TMX4 thioredoxin-related transmembrane protein 4 0.0277994
RTN4 reticulon 4 0.0268877
SOD2 superoxide dismutase 2, mitochondrial 0.0268663
TGFBI transforming growth factor, beta-induced, 68kDa 0.0266459
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0266206
SDK1 sidekick cell adhesion molecule 1 0.0266132
MT1X metallothionein 1X 0.0264937
LTBP1 latent transforming growth factor beta binding protein 1 0.0255939
NAMPT nicotinamide phosphoribosyltransferase 0.0246574
ESYT2 extended synaptotagmin-like protein 2 0.0244146
MPRIP myosin phosphatase Rho interacting protein 0.0241847
BCL2L1 BCL2-like 1 0.024132
IRAK3 interleukin-1 receptor-associated kinase 3 0.0238834
ERRFI1 ERBB receptor feedback inhibitor 1 0.023708
BASP1 brain abundant, membrane attached signal protein 1 0.0236826
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0233953
DST dystonin 0.0232892
MED13L mediator complex subunit 13-like 0.0229939
EPAS1 endothelial PAS domain protein 1 0.0228628
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0228078
TGFB2 transforming growth factor, beta 2 0.022314
THBS1 thrombospondin 1 0.0222481
ADAMTS9 ADAM metallopeptidase with thrombospondin type 1 motif, 9 0.0218846
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0217609
RNF220 ring finger protein 220 0.0216372
MBNL1 muscleblind-like splicing regulator 1 0.0212988
FAM13A family with sequence similarity 13, member A 0.0212691
CD109 CD109 molecule 0.0212296
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0207904
LAMB1 laminin, beta 1 0.0205214
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0200771
BIRC3 baculoviral IAP repeat containing 3 0.0200641
TPM3 tropomyosin 3 0.0197888
LDLRAD3 low density lipoprotein receptor class A domain containing 3 0.0195725
ZFP36L1 ZFP36 ring finger protein-like 1 0.0194429
SET SET nuclear proto-oncogene 0.0193135
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0191428
PTPRJ protein tyrosine phosphatase, receptor type, J 0.0191017
TPR translocated promoter region, nuclear basket protein 0.0190264
FGD4 FYVE, RhoGEF and PH domain containing 4 0.0189242
CUL4B cullin 4B 0.0188961
RPL3 ribosomal protein L3 0.0180069
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric 0.0179567
TPX2 TPX2, microtubule-associated 0.0176611
DPYD dihydropyrimidine dehydrogenase 0.0176447
MSN moesin 0.0175427
KIF5B kinesin family member 5B 0.0175417
PKM pyruvate kinase, muscle 0.0171249
KLF9 Kruppel-like factor 9 0.0171176
TNIP1 TNFAIP3 interacting protein 1 0.0169425
ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein 0.0167849
PTPN1 protein tyrosine phosphatase, non-receptor type 1 0.0167659
MYL12B myosin, light chain 12B, regulatory 0.0165064
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0164835
UBE2E1 ubiquitin-conjugating enzyme E2E 1 0.0163959
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0162656
TBC1D5 TBC1 domain family, member 5 0.0161928
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0161165
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) 0.0160669

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.297247
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.173814
VIM vimentin -0.148546
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.127508
EXT1 exostosin glycosyltransferase 1 -0.123991
CDH13 cadherin 13 -0.116824
TRIO trio Rho guanine nucleotide exchange factor -0.111174
CXCL8 chemokine (C-X-C motif) ligand 8 -0.105947
NDRG1 N-myc downstream regulated 1 -0.09218
DTNA dystrobrevin, alpha -0.0643627
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0623127
COL5A1 collagen, type V, alpha 1 -0.0620007
PDE10A phosphodiesterase 10A -0.0599557
NAV1 neuron navigator 1 -0.0593477
CD44 CD44 molecule (Indian blood group) -0.0571812
STC1 stanniocalcin 1 -0.0553388
TPT1 tumor protein, translationally-controlled 1 -0.0549495
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0525266
AFF3 AF4/FMR2 family, member 3 -0.0517346
HMGA2 high mobility group AT-hook 2 -0.0494937
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0483255
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0460783
IGFBP3 insulin-like growth factor binding protein 3 -0.041062
COL6A2 collagen, type VI, alpha 2 -0.0400199
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0384795
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 -0.0384681
MAML3 mastermind-like 3 (Drosophila) -0.0374111
ELL2 elongation factor, RNA polymerase II, 2 -0.0373772
TM4SF1 transmembrane 4 L six family member 1 -0.0372125
IER3 immediate early response 3 -0.035995
MYO10 myosin X -0.0356988
GRB10 growth factor receptor-bound protein 10 -0.03566
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0345977
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0343146
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats -0.0337697
JARID2 jumonji, AT rich interactive domain 2 -0.0334979
BACE2 beta-site APP-cleaving enzyme 2 -0.0315768
ATXN1 ataxin 1 -0.0312113
INHBA inhibin, beta A -0.0310798
IL11 interleukin 11 -0.0301656
INTS6 integrator complex subunit 6 -0.0297032
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0296008
EGR1 early growth response 1 -0.0295209
IGF1R insulin-like growth factor 1 receptor -0.0288615
CDCP1 CUB domain containing protein 1 -0.0280976
NGLY1 N-glycanase 1 -0.0275404
DLG1 discs, large homolog 1 (Drosophila) -0.0275336
FGFR1 fibroblast growth factor receptor 1 -0.0274147
SAMD4A sterile alpha motif domain containing 4A -0.0265524
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0264989
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0264732
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.0258509
BTG1 B-cell translocation gene 1, anti-proliferative -0.0256513
ASPH aspartate beta-hydroxylase -0.0256432
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0253098
PPARD peroxisome proliferator-activated receptor delta -0.025075
IL1B interleukin 1, beta -0.0250461
KHDRBS3 KH domain containing, RNA binding, signal transduction associated 3 -0.0248299
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0244892
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0243602
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.0243214
ADM adrenomedullin -0.0241448
ARHGAP22 Rho GTPase activating protein 22 -0.0240809
RAI14 retinoic acid induced 14 -0.023988
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 -0.0239198
BTBD9 BTB (POZ) domain containing 9 -0.0235986
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0235442
CFAP20DC CFAP20 domain containing -0.0233414
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 -0.0232153
ANTXR2 anthrax toxin receptor 2 -0.0231264
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0231059
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0230322
CCND1 cyclin D1 -0.0229731
P4HB prolyl 4-hydroxylase, beta polypeptide -0.022914
COL7A1 collagen, type VII, alpha 1 -0.0220444
RPL12 ribosomal protein L12 -0.021879
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.0214313
LAMB3 laminin, beta 3 -0.0213939
SEPTIN9 septin 9 -0.0213659
LIMS1 LIM and senescent cell antigen-like domains 1 -0.0213451
RFX8 RFX family member 8, lacking RFX DNA binding domain -0.0212099
CADM1 cell adhesion molecule 1 -0.0211183
MAP1B microtubule-associated protein 1B -0.0210173
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.0209146
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0208972
NUMB numb homolog (Drosophila) -0.0208553
SQSTM1 sequestosome 1 -0.0205484
PTPRM protein tyrosine phosphatase, receptor type, M -0.0203266
RASA3 RAS p21 protein activator 3 -0.0201058
CANX calnexin -0.0200753
RCOR1 REST corepressor 1 -0.020043
MRPS6 mitochondrial ribosomal protein S6 -0.0200029
NABP1 nucleic acid binding protein 1 -0.0199506
FBXO11 F-box protein 11 -0.0198216
GFPT2 glutamine-fructose-6-phosphate transaminase 2 -0.0195999
LHFPL2 lipoma HMGIC fusion partner-like 2 -0.0195382
FRMD4A FERM domain containing 4A -0.0194294
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like -0.0192937
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.019049
COL6A1 collagen, type VI, alpha 1 -0.0187911