Betamethasone dipropionate_HS-578T Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Betamethasone dipropionate perturbation in HS-578T cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Betamethasone dipropionate_HS-578T drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FN1 fibronectin 1 0.41905
COL6A3 collagen, type VI, alpha 3 0.321142
ERRFI1 ERBB receptor feedback inhibitor 1 0.121632
FTH1 ferritin, heavy polypeptide 1 0.10485
LOX lysyl oxidase 0.0999105
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 0.0930785
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) 0.0892219
HIPK2 homeodomain interacting protein kinase 2 0.085098
LDHA lactate dehydrogenase A 0.0845113
VEGFA vascular endothelial growth factor A 0.0663922
MAML2 mastermind-like 2 (Drosophila) 0.0593241
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0588839
F3 coagulation factor III (thromboplastin, tissue factor) 0.0587113
STXBP5 syntaxin binding protein 5 (tomosyn) 0.055398
AKAP12 A kinase (PRKA) anchor protein 12 0.0545778
HMGA2 high mobility group AT-hook 2 0.0526187
MYH9 myosin, heavy chain 9, non-muscle 0.0508739
LTBP1 latent transforming growth factor beta binding protein 1 0.0505021
MT2A metallothionein 2A 0.0472287
SORBS2 sorbin and SH3 domain containing 2 0.045402
TGFBI transforming growth factor, beta-induced, 68kDa 0.0453551
COL5A1 collagen, type V, alpha 1 0.0453365
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0437819
PRELID2 PRELI domain containing 2 0.0428833
MBNL1 muscleblind-like splicing regulator 1 0.0418227
PTPRG protein tyrosine phosphatase, receptor type, G 0.0389185
NRP1 neuropilin 1 0.0388513
DPYD dihydropyrimidine dehydrogenase 0.0386032
MYO1B myosin IB 0.0384939
JAK2 Janus kinase 2 0.0373138
ANGPTL4 angiopoietin-like 4 0.0359995
BIRC3 baculoviral IAP repeat containing 3 0.0359838
CCN4 cellular communication network factor 4 0.0345846
PID1 phosphotyrosine interaction domain containing 1 0.0342107
PSD3 pleckstrin and Sec7 domain containing 3 0.0340863
PTEN phosphatase and tensin homolog 0.0339858
CD109 CD109 molecule 0.0337931
EPS8 epidermal growth factor receptor pathway substrate 8 0.0328239
MT1X metallothionein 1X 0.0327882
ABLIM3 actin binding LIM protein family, member 3 0.0315996
PACSIN2 protein kinase C and casein kinase substrate in neurons 2 0.0311347
ZMYND8 zinc finger, MYND-type containing 8 0.031116
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide 0.0307599
LPP LIM domain containing preferred translocation partner in lipoma 0.0296264
MED13L mediator complex subunit 13-like 0.0293072
DNER delta/notch-like EGF repeat containing 0.0288982
SH3RF3 SH3 domain containing ring finger 3 0.0285141
COL7A1 collagen, type VII, alpha 1 0.0282127
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0281623
ZFHX3 zinc finger homeobox 3 0.0273245
IL1R1 interleukin 1 receptor, type I 0.0264339
IL6ST interleukin 6 signal transducer 0.0257464
TOP1 topoisomerase (DNA) I 0.025616
MGP matrix Gla protein 0.0248588
ATP1A4 ATPase, Na+/K+ transporting, alpha 4 polypeptide 0.024668
ANKRD28 ankyrin repeat domain 28 0.024426
PPM1L protein phosphatase, Mg2+/Mn2+ dependent, 1L 0.0232012
SLC38A2 solute carrier family 38, member 2 0.0227334
UTRN utrophin 0.0221106
FOXO3 forkhead box O3 0.0220214
TNS1 tensin 1 0.0206801
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0206333
DOCK5 dedicator of cytokinesis 5 0.0203818
PRICKLE2 prickle homolog 2 (Drosophila) 0.0202897
HIP1 huntingtin interacting protein 1 0.0199034
NAV1 neuron navigator 1 0.019845
GLIS3 GLIS family zinc finger 3 0.0197654
FKBP5 FK506 binding protein 5 0.0197187
TGFBR3 transforming growth factor, beta receptor III 0.0196517
MACF1 microtubule-actin crosslinking factor 1 0.0188464
FAM13A family with sequence similarity 13, member A 0.0186253
POTEF POTE ankyrin domain family, member F 0.0185091
NAV2 neuron navigator 2 0.0181114
DCN decorin 0.0177885
COL5A2 collagen, type V, alpha 2 0.0177198
AKAP13 A kinase (PRKA) anchor protein 13 0.017707
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0176911
NCOR2 nuclear receptor corepressor 2 0.0175507
RPL3 ribosomal protein L3 0.0175229
ZFP36L1 ZFP36 ring finger protein-like 1 0.0174949
EFNA5 ephrin-A5 0.0174578
ZNF395 zinc finger protein 395 0.0174048
PDIA5 protein disulfide isomerase family A, member 5 0.0173374
FGD4 FYVE, RhoGEF and PH domain containing 4 0.0173181
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0171825
TRAM2 translocation associated membrane protein 2 0.0171468
JAK1 Janus kinase 1 0.0170625
VPS13B vacuolar protein sorting 13 homolog B (yeast) 0.016637
MSN moesin 0.0165768
PLEC plectin 0.016575
COL4A2 collagen, type IV, alpha 2 0.0163817
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.0163246
CHD9 chromodomain helicase DNA binding protein 9 0.0161748
COL4A1 collagen, type IV, alpha 1 0.0160655
WNT5A wingless-type MMTV integration site family, member 5A 0.0159893
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 0.01587
EEF2 eukaryotic translation elongation factor 2 0.0158697
RPS6KA2 ribosomal protein S6 kinase, 90kDa, polypeptide 2 0.0156702
DCLK1 doublecortin-like kinase 1 0.015639
RBMS1 RNA binding motif, single stranded interacting protein 1 0.0156311

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.264195
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.210496
VIM vimentin -0.124373
CD44 CD44 molecule (Indian blood group) -0.101086
IER3 immediate early response 3 -0.101075
COL1A1 collagen, type I, alpha 1 -0.0930495
EXT1 exostosin glycosyltransferase 1 -0.0903767
CXCL8 chemokine (C-X-C motif) ligand 8 -0.081306
TRIO trio Rho guanine nucleotide exchange factor -0.0806885
TM4SF1 transmembrane 4 L six family member 1 -0.0701516
CADM1 cell adhesion molecule 1 -0.0630573
PTMA prothymosin, alpha -0.0628638
NDRG1 N-myc downstream regulated 1 -0.0628138
NKAIN3 Na+/K+ transporting ATPase interacting 3 -0.0562356
TMSB10 thymosin beta 10 -0.0529407
FTL ferritin, light polypeptide -0.0520787
IGFBP3 insulin-like growth factor binding protein 3 -0.0510229
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.050639
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0483041
TIMP3 TIMP metallopeptidase inhibitor 3 -0.0482775
INHBA inhibin, beta A -0.045771
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0454587
RPL35A ribosomal protein L35a -0.0405596
RPS8 ribosomal protein S8 -0.0375131
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0359547
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0332264
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0322925
RPS6 ribosomal protein S6 -0.0318657
ATP13A3 ATPase type 13A3 -0.0317454
PDE10A phosphodiesterase 10A -0.0313337
EIF1 eukaryotic translation initiation factor 1 -0.0306601
B2M beta-2-microglobulin -0.0303267
LGALS1 lectin, galactoside-binding, soluble, 1 -0.0301647
HLA-B major histocompatibility complex, class I, B -0.0296494
BHLHE40 basic helix-loop-helix family, member e40 -0.0293887
TPT1 tumor protein, translationally-controlled 1 -0.0292336
ZFAND3 zinc finger, AN1-type domain 3 -0.0291795
LOXL2 lysyl oxidase-like 2 -0.0288474
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0287308
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0284727
CDH13 cadherin 13 -0.0280699
RPL19 ribosomal protein L19 -0.0277383
SMAD3 SMAD family member 3 -0.0275684
RPL12 ribosomal protein L12 -0.0270654
UBC ubiquitin C -0.0260044
RASA2 RAS p21 protein activator 2 -0.0250068
S100A9 S100 calcium binding protein A9 -0.0247813
NALF1 NALCN channel auxiliary factor 1 -0.0245725
S100A10 S100 calcium binding protein A10 -0.0243099
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0242063
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.0241377
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0241301
DLG1 discs, large homolog 1 (Drosophila) -0.0232599
ACTG1 actin gamma 1 -0.0231099
ANTXR2 anthrax toxin receptor 2 -0.0229997
CANX calnexin -0.0228483
RPL8 ribosomal protein L8 -0.022769
RPL11 ribosomal protein L11 -0.0226702
RPL23 ribosomal protein L23 -0.0226669
RPL34 ribosomal protein L34 -0.0223139
RPLP1 ribosomal protein, large, P1 -0.0221394
SQSTM1 sequestosome 1 -0.0216655
RICTOR RPTOR independent companion of MTOR, complex 2 -0.021544
MYO10 myosin X -0.021485
PDE4D phosphodiesterase 4D, cAMP-specific -0.0209528
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0206842
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0206501
PLAUR plasminogen activator, urokinase receptor -0.0204893
RIPK2 receptor-interacting serine-threonine kinase 2 -0.0204836
ASPH aspartate beta-hydroxylase -0.0202914
PGK1 phosphoglycerate kinase 1 -0.0202239
PTP4A2 protein tyrosine phosphatase type IVA, member 2 -0.0200453
USP3 ubiquitin specific peptidase 3 -0.0198965
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0197381
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0194888
RPLP0 ribosomal protein, large, P0 -0.0194837
ECE1 endothelin converting enzyme 1 -0.0194456
RPS24 ribosomal protein S24 -0.0193714
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 -0.0193362
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 -0.0192437
RPL28 ribosomal protein L28 -0.0192003
RPS19 ribosomal protein S19 -0.0191663
WSB1 WD repeat and SOCS box containing 1 -0.0190447
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0190429
RPL32 ribosomal protein L32 -0.0187154
RIGI RNA sensor RIG-I -0.0183329
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0183283
FNDC3B fibronectin type III domain containing 3B -0.0181837
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0179871
RLF rearranged L-myc fusion -0.0177523
RHEB Ras homolog enriched in brain -0.0177353
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0174765
RRBP1 ribosome binding protein 1 -0.0174363
RPL26 ribosomal protein L26 -0.0174242
H1-0 H1.0 linker histone -0.0170807
RPS20 ribosomal protein S20 -0.0169633
RAP1B RAP1B, member of RAS oncogene family -0.016959
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 -0.0169577
CALU calumenin -0.0168576
KIAA1217 KIAA1217 -0.0168083