Betamethasone dipropionate_NCI-H1573 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Betamethasone dipropionate perturbation in NCI-H1573 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Betamethasone dipropionate_NCI-H1573 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MT2A metallothionein 2A 0.182622
S100P S100 calcium binding protein P 0.118677
ATP1A4 ATPase, Na+/K+ transporting, alpha 4 polypeptide 0.0892009
MAP2K1 mitogen-activated protein kinase kinase 1 0.0603992
PDE4D phosphodiesterase 4D, cAMP-specific 0.0442467
CES1 carboxylesterase 1 0.039889
MKI67 marker of proliferation Ki-67 0.038034
IRS2 insulin receptor substrate 2 0.0356882
CAV1 caveolin 1, caveolae protein, 22kDa 0.034997
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0346221
FTH1 ferritin, heavy polypeptide 1 0.0326564
DSPP dentin sialophosphoprotein 0.031582
FRY furry homolog (Drosophila) 0.0300605
MT1X metallothionein 1X 0.0272983
BIRC3 baculoviral IAP repeat containing 3 0.0266791
MGST1 microsomal glutathione S-transferase 1 0.0266241
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0257374
SRRM2 serine/arginine repetitive matrix 2 0.0251987
LDHA lactate dehydrogenase A 0.0248938
AHNAK AHNAK nucleoprotein 0.0234692
NAMPT nicotinamide phosphoribosyltransferase 0.0231294
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0227651
DNER delta/notch-like EGF repeat containing 0.0209511
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.020211
ATP11A ATPase, class VI, type 11A 0.0201458
PYGL phosphorylase, glycogen, liver 0.0193387
SLC26A2 solute carrier family 26 (anion exchanger), member 2 0.0185553
DYNC2I1 dynein 2 intermediate chain 1 0.0182734
EGFR epidermal growth factor receptor 0.0178025
SCNN1G sodium channel, non voltage gated 1 gamma subunit 0.0177897
LANCL2 LanC lantibiotic synthetase component C-like 2 (bacterial) 0.0175692
PLEC plectin 0.0175365
ZFP36L1 ZFP36 ring finger protein-like 1 0.0172053
MLKL mixed lineage kinase domain-like 0.0171711
SPTSSA serine palmitoyltransferase, small subunit A 0.0167735
NEBL nebulette 0.0161759
RPL3 ribosomal protein L3 0.0155677
FKBP5 FK506 binding protein 5 0.0151863
ESYT2 extended synaptotagmin-like protein 2 0.0148479
METTL9 methyltransferase like 9 0.014747
BCL9L B-cell CLL/lymphoma 9-like 0.0146903
ARGLU1 arginine and glutamate rich 1 0.0144414
TPM3 tropomyosin 3 0.0140883
ANK3 ankyrin 3, node of Ranvier (ankyrin G) 0.0139122
PACSIN2 protein kinase C and casein kinase substrate in neurons 2 0.0138333
CLMN calmin (calponin-like, transmembrane) 0.0138177
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0136633
B3GNT5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 0.0135987
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0134863
TNIP1 TNFAIP3 interacting protein 1 0.0130465
CALD1 caldesmon 1 0.0126896
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 0.0124308
CAPRIN2 caprin family member 2 0.0124104
HSPA8 heat shock 70kDa protein 8 0.0123771
RBM25 RNA binding motif protein 25 0.0117295
MTSS1 metastasis suppressor 1 0.0114403
SPRED1 sprouty-related, EVH1 domain containing 1 0.0110359
TRIM29 tripartite motif containing 29 0.0108367
CYFIP1 cytoplasmic FMR1 interacting protein 1 0.0107851
RNF149 ring finger protein 149 0.0107497
ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 0.0107113
FARP1 FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) 0.010546
UBE3A ubiquitin protein ligase E3A 0.010466
RBM19 RNA binding motif protein 19 0.0102287
TNRC6A trinucleotide repeat containing 6A 0.010066
FBXO28 F-box protein 28 0.0100047
MAML3 mastermind-like 3 (Drosophila) 0.00999131
PTPN1 protein tyrosine phosphatase, non-receptor type 1 0.00983907
ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein 0.0096227
DIS3 DIS3 exosome endoribonuclease and 3'-5' exoribonuclease 0.00947001
HOMER2 homer scaffolding protein 2 0.00941851
AKAP9 A kinase (PRKA) anchor protein 9 0.00938088
SLC39A8 solute carrier family 39 (zinc transporter), member 8 0.00935693
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 0.00930791
POTEF POTE ankyrin domain family, member F 0.00927347
FAM110C family with sequence similarity 110, member C 0.009272
MIDEAS mitotic deacetylase associated SANT domain protein 0.00926866
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.00907959
HMGA2 high mobility group AT-hook 2 0.00907783
UBE4A ubiquitination factor E4A 0.00904719
EIF3A eukaryotic translation initiation factor 3, subunit A 0.00899507
GPATCH2L G patch domain containing 2-like 0.00894015
PPP2R2C protein phosphatase 2, regulatory subunit B, gamma 0.00887443
WDR41 WD repeat domain 41 0.00881901
ZNF292 zinc finger protein 292 0.00878324
AUTS2 autism susceptibility candidate 2 0.00870719
SACK1A scaffolding CK1 anchoring protein A 0.00854066
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.00846886
SAMSN1 SAM domain, SH3 domain and nuclear localization signals 1 0.00843761
LRRC8A leucine rich repeat containing 8 family, member A 0.00842487
NACA nascent polypeptide-associated complex alpha subunit 0.00837337
FGD4 FYVE, RhoGEF and PH domain containing 4 0.00833139
BLTP1 bridge-like lipid transfer protein family member 1 0.00825964
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.00824159
IGSF9B immunoglobulin superfamily, member 9B 0.00817928
TOP2A topoisomerase (DNA) II alpha 170kDa 0.00810642
RPS4X ribosomal protein S4, X-linked 0.00802057
PNN pinin, desmosome associated protein 0.00802005
KRT6A keratin 6A, type II 0.00801644
MTHFD2L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like 0.00789727

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.281436
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.162195
ASPH aspartate beta-hydroxylase -0.117945
TXNRD1 thioredoxin reductase 1 -0.0962906
NDRG1 N-myc downstream regulated 1 -0.0800218
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) -0.0791905
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0667708
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0625736
TPT1 tumor protein, translationally-controlled 1 -0.0620508
PTMA prothymosin, alpha -0.0591906
ACTG1 actin gamma 1 -0.0576273
PTPRM protein tyrosine phosphatase, receptor type, M -0.0557364
S100A10 S100 calcium binding protein A10 -0.05422
TMSB10 thymosin beta 10 -0.0533912
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 -0.0524402
ANXA2 annexin A2 -0.0521836
CXCL8 chemokine (C-X-C motif) ligand 8 -0.051165
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 -0.0457046
STC1 stanniocalcin 1 -0.0444128
FNDC3B fibronectin type III domain containing 3B -0.0437087
FTL ferritin, light polypeptide -0.043366
LRP1B low density lipoprotein receptor-related protein 1B -0.0429776
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0369063
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0366197
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0364694
ELL2 elongation factor, RNA polymerase II, 2 -0.035176
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0349562
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0344656
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0341081
LMO7 LIM domain 7 -0.0337096
IGFBP3 insulin-like growth factor binding protein 3 -0.0331448
LAMC2 laminin, gamma 2 -0.0330358
RPS24 ribosomal protein S24 -0.0323537
MYO1E myosin IE -0.0322187
EGR1 early growth response 1 -0.0304134
SLC38A1 solute carrier family 38, member 1 -0.0292555
UBC ubiquitin C -0.0287053
RNF213 ring finger protein 213 -0.027053
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.0268639
PKM pyruvate kinase, muscle -0.0267092
VOPP1 vesicular, overexpressed in cancer, prosurvival protein 1 -0.0266035
RPS25 ribosomal protein S25 -0.0264685
DSCAM Down syndrome cell adhesion molecule -0.0262034
IFI6 interferon, alpha-inducible protein 6 -0.0262011
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 -0.02613
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0255772
IGFBP5 insulin-like growth factor binding protein 5 -0.0254057
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0253488
HLA-B major histocompatibility complex, class I, B -0.025292
SMAD3 SMAD family member 3 -0.0252899
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0249734
AREG amphiregulin -0.0244034
NCOA3 nuclear receptor coactivator 3 -0.0242179
MAP7 microtubule-associated protein 7 -0.0242108
SLC38A2 solute carrier family 38, member 2 -0.02393
BTG1 B-cell translocation gene 1, anti-proliferative -0.0237765
PATJ PATJ crumbs cell polarity complex component -0.0234576
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0234316
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0233818
GRAMD1B GRAM domain containing 1B -0.0232448
LPP LIM domain containing preferred translocation partner in lipoma -0.0232014
GNPDA1 glucosamine-6-phosphate deaminase 1 -0.0230334
BAIAP2L1 BAI1-associated protein 2-like 1 -0.0227363
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0226608
NPAS2 neuronal PAS domain protein 2 -0.0220618
ZMYND8 zinc finger, MYND-type containing 8 -0.0218437
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0218249
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0218218
SP100 SP100 nuclear antigen -0.0217355
IER3 immediate early response 3 -0.0217131
CEMIP cell migration inducing protein, hyaluronan binding -0.0214237
INTS6 integrator complex subunit 6 -0.0213377
GRB10 growth factor receptor-bound protein 10 -0.021221
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0211723
PM20D1 peptidase M20 domain containing 1 -0.0210374
UGDH UDP-glucose 6-dehydrogenase -0.0206405
THSD4 thrombospondin, type I, domain containing 4 -0.0206282
PARD3 par-3 family cell polarity regulator -0.0206038
CAPZA2 capping protein (actin filament) muscle Z-line, alpha 2 -0.0200349
RPL35A ribosomal protein L35a -0.0199878
ABLIM1 actin binding LIM protein 1 -0.0199576
ANXA1 annexin A1 -0.0198666
ANKRD12 ankyrin repeat domain 12 -0.0198656
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0194767
GSK3B glycogen synthase kinase 3 beta -0.0194072
PGK1 phosphoglycerate kinase 1 -0.0192477
FUS FUS RNA binding protein -0.0191865
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0191417
KRT18 keratin 18, type I -0.0190937
FBXO11 F-box protein 11 -0.0190886
RPL31 ribosomal protein L31 -0.0189229
CPE carboxypeptidase E -0.0185618
ZBTB20 zinc finger and BTB domain containing 20 -0.0183393
PDE8A phosphodiesterase 8A -0.0181839
HOMER1 homer scaffolding protein 1 -0.0180174
RAB27B RAB27B, member RAS oncogene family -0.0179425
SAMD4A sterile alpha motif domain containing 4A -0.0178574
MAP3K20 mitogen-activated protein kinase kinase kinase 20 -0.0177996
KRT7 keratin 7, type II -0.0175388
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) -0.0174934