Betamethasone dipropionate_NCI-H2030 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Betamethasone dipropionate perturbation in NCI-H2030 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Betamethasone dipropionate_NCI-H2030 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PM20D1 peptidase M20 domain containing 1 0.10539
MT2A metallothionein 2A 0.0797588
BIRC3 baculoviral IAP repeat containing 3 0.0472243
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0441368
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0387645
NAMPT nicotinamide phosphoribosyltransferase 0.0336487
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0317359
FGB fibrinogen beta chain 0.031184
AKAP12 A kinase (PRKA) anchor protein 12 0.0304677
WDR43 WD repeat domain 43 0.0304556
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0295133
SRGN serglycin 0.026943
FGA fibrinogen alpha chain 0.0264774
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0261862
KLF6 Kruppel-like factor 6 0.0245466
CENPF centromere protein F, 350/400kDa 0.022855
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0224271
MKI67 marker of proliferation Ki-67 0.0207437
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0205423
MIS18BP1 MIS18 binding protein 1 0.0186576
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 0.0182115
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0181922
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0180565
RPL3 ribosomal protein L3 0.0176701
FXR1 fragile X mental retardation, autosomal homolog 1 0.0174645
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0173449
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0170109
FTH1 ferritin, heavy polypeptide 1 0.0170031
RAD21 RAD21 homolog (S. pombe) 0.0163324
TPX2 TPX2, microtubule-associated 0.0162988
RTN4 reticulon 4 0.0157909
ANKRD28 ankyrin repeat domain 28 0.0156144
YBX3 Y box binding protein 3 0.0153145
HMGB2 high mobility group box 2 0.0152662
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 0.0152453
RBM27 RNA binding motif protein 27 0.0150037
RBM25 RNA binding motif protein 25 0.0149615
EEF2 eukaryotic translation elongation factor 2 0.0146806
SIN3A SIN3 transcription regulator family member A 0.0143245
NAP1L1 nucleosome assembly protein 1-like 1 0.0143229
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.0143118
DLGAP5 discs, large (Drosophila) homolog-associated protein 5 0.0143055
CNOT6L CCR4-NOT transcription complex, subunit 6-like 0.0141887
PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) 0.0140807
CCNL1 cyclin L1 0.0139913
SERBP1 SERPINE1 mRNA binding protein 1 0.0139602
G2E3 G2/M-phase specific E3 ubiquitin protein ligase 0.0138258
LRPPRC leucine-rich pentatricopeptide repeat containing 0.0136465
LAMB1 laminin, beta 1 0.0135056
PKM pyruvate kinase, muscle 0.013315
CENPE centromere protein E, 312kDa 0.013249
BUB1B BUB1 mitotic checkpoint serine/threonine kinase B 0.0130043
DDX56 DEAD (Asp-Glu-Ala-Asp) box helicase 56 0.0129635
TFG TRK-fused gene 0.012879
RPS7 ribosomal protein S7 0.0127687
RPL4 ribosomal protein L4 0.0127565
PSMC6 proteasome (prosome, macropain) 26S subunit, ATPase, 6 0.0127397
CRY1 cryptochrome circadian clock 1 0.0127348
NUSAP1 nucleolar and spindle associated protein 1 0.0126009
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0124318
LAPTM4A lysosomal protein transmembrane 4 alpha 0.0122726
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0122419
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.0122417
POTEF POTE ankyrin domain family, member F 0.0119734
CAVIN2 caveolae associated protein 2 0.0118508
FAM135A family with sequence similarity 135, member A 0.0117445
PNISR PNN-interacting serine/arginine-rich protein 0.0116448
KIF23 kinesin family member 23 0.011551
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0115194
EIF3E eukaryotic translation initiation factor 3, subunit E 0.0114764
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9 0.0114509
ERRFI1 ERBB receptor feedback inhibitor 1 0.0114296
SF1 splicing factor 1 0.0113226
ECT2 epithelial cell transforming 2 0.0113077
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.011212
KHDC4 KH domain containing 4, pre-mRNA splicing factor 0.0110941
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0110839
TMEM123 transmembrane protein 123 0.0108807
BCLAF1 BCL2-associated transcription factor 1 0.0108383
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0107838
BIRC2 baculoviral IAP repeat containing 2 0.0107707
PCBP2 poly(rC) binding protein 2 0.0106968
TPM3 tropomyosin 3 0.0106018
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.010591
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0104237
UBE3A ubiquitin protein ligase E3A 0.010382
HSPA4 heat shock 70kDa protein 4 0.0102959
FOXJ3 forkhead box J3 0.0102715
BUB1 BUB1 mitotic checkpoint serine/threonine kinase 0.0102582
YBX1 Y box binding protein 1 0.0102368
PRR11 proline rich 11 0.0102245
EIF4H eukaryotic translation initiation factor 4H 0.0101958
MIER1 mesoderm induction early response 1, transcriptional regulator 0.0101833
CYRIB CYFIP related Rac1 interactor B 0.0101517
PSMA3 proteasome (prosome, macropain) subunit, alpha type, 3 0.0101086
DEK DEK proto-oncogene 0.0100763
SBNO1 strawberry notch homolog 1 (Drosophila) 0.0100492
GTPBP4 GTP binding protein 4 0.00998264
CCDC6 coiled-coil domain containing 6 0.00996967
WTAP Wilms tumor 1 associated protein 0.00981996

decreased expression

Symbol Name Standardized Value
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.248174
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.17328
DOCK4 dedicator of cytokinesis 4 -0.121356
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.114037
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0997124
SAMD4A sterile alpha motif domain containing 4A -0.0927521
THSD4 thrombospondin, type I, domain containing 4 -0.0919228
TMSB10 thymosin beta 10 -0.091046
CMIP c-Maf inducing protein -0.0768398
VIM vimentin -0.0724355
FTL ferritin, light polypeptide -0.0710261
PDE4D phosphodiesterase 4D, cAMP-specific -0.0695856
TM4SF1 transmembrane 4 L six family member 1 -0.0639463
IGFBP3 insulin-like growth factor binding protein 3 -0.0614622
FNDC3B fibronectin type III domain containing 3B -0.0589027
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0569564
IER3 immediate early response 3 -0.052145
PYGL phosphorylase, glycogen, liver -0.0486007
FMNL2 formin-like 2 -0.0457894
DOCK5 dedicator of cytokinesis 5 -0.0443203
SVIL supervillin -0.0439598
EGFR epidermal growth factor receptor -0.042588
FLNB filamin B, beta -0.0412555
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0409554
UBASH3B ubiquitin associated and SH3 domain containing B -0.0392263
SIPA1L1 signal-induced proliferation-associated 1 like 1 -0.0382961
ZFAND3 zinc finger, AN1-type domain 3 -0.0378031
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0367184
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0360613
TRIO trio Rho guanine nucleotide exchange factor -0.0357415
IGF2 insulin-like growth factor 2 -0.0357251
SMOC1 SPARC related modular calcium binding 1 -0.0353093
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0352539
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0349032
S100A6 S100 calcium binding protein A6 -0.0344856
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0337965
EIF1 eukaryotic translation initiation factor 1 -0.033689
SHANK2 SH3 and multiple ankyrin repeat domains 2 -0.0335079
EXT1 exostosin glycosyltransferase 1 -0.0334071
CXCL8 chemokine (C-X-C motif) ligand 8 -0.033089
ACTG1 actin gamma 1 -0.0327969
TPT1 tumor protein, translationally-controlled 1 -0.0319723
ATXN1 ataxin 1 -0.0306473
RPL19 ribosomal protein L19 -0.030597
GLIS3 GLIS family zinc finger 3 -0.0305718
HLA-B major histocompatibility complex, class I, B -0.0302707
LPP LIM domain containing preferred translocation partner in lipoma -0.0301683
USP34 ubiquitin specific peptidase 34 -0.0295729
KYNU kynureninase -0.0293428
MCL1 myeloid cell leukemia 1 -0.0290484
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0289393
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0287929
FAM107B family with sequence similarity 107, member B -0.0287589
MAML3 mastermind-like 3 (Drosophila) -0.0280879
MACF1 microtubule-actin crosslinking factor 1 -0.0279673
NRG1 neuregulin 1 -0.0279602
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0279136
NEGR1 neuronal growth regulator 1 -0.027562
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0274043
ZBTB20 zinc finger and BTB domain containing 20 -0.0268634
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0268068
AHNAK AHNAK nucleoprotein -0.0266325
NF1 neurofibromin 1 -0.0265878
C15ORF48 chromosome 15 open reading frame 48 -0.0262626
DST dystonin -0.0259091
ACTN1 actinin, alpha 1 -0.0258249
ARHGAP26 Rho GTPase activating protein 26 -0.0257962
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase -0.0256986
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0254066
ASPH aspartate beta-hydroxylase -0.0253488
RAB1A RAB1A, member RAS oncogene family -0.0251079
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0246457
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.0245759
DHRSX dehydrogenase/reductase (SDR family) X-linked -0.0245175
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 -0.0241982
NEBL nebulette -0.0241781
MYOF myoferlin -0.0240461
NUMB numb homolog (Drosophila) -0.0240409
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0237158
ARHGEF28 Rho guanine nucleotide exchange factor (GEF) 28 -0.0236277
GRAMD1B GRAM domain containing 1B -0.0233542
PATJ PATJ crumbs cell polarity complex component -0.0227988
ATG7 autophagy related 7 -0.0227211
CAVIN1 caveolae associated protein 1 -0.0224132
STC1 stanniocalcin 1 -0.0223926
BICC1 BicC family RNA binding protein 1 -0.0222706
VPS13B vacuolar protein sorting 13 homolog B (yeast) -0.0221587
PMEPA1 prostate transmembrane protein, androgen induced 1 -0.0218197
S100A10 S100 calcium binding protein A10 -0.0217501
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.021599
ELL2 elongation factor, RNA polymerase II, 2 -0.0213558
ALCAM activated leukocyte cell adhesion molecule -0.0213138
SMAD3 SMAD family member 3 -0.021283
NAV3 neuron navigator 3 -0.0211622
PARD3 par-3 family cell polarity regulator -0.021154
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0210422
AK1 adenylate kinase 1 -0.0208769
CUX1 cut-like homeobox 1 -0.0208703
MAP3K20 mitogen-activated protein kinase kinase kinase 20 -0.0207646
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0207446