Betamethasone dipropionate_RPMI-7951 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Betamethasone dipropionate perturbation in RPMI-7951 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Betamethasone dipropionate_RPMI-7951 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MT2A metallothionein 2A 0.18174
FN1 fibronectin 1 0.163979
AKAP12 A kinase (PRKA) anchor protein 12 0.109776
PTPRG protein tyrosine phosphatase, receptor type, G 0.0704163
IRAK3 interleukin-1 receptor-associated kinase 3 0.0691308
HMGA2 high mobility group AT-hook 2 0.0527351
ZMYND8 zinc finger, MYND-type containing 8 0.0428738
ESYT2 extended synaptotagmin-like protein 2 0.0418864
NAV2 neuron navigator 2 0.0367469
TOP1 topoisomerase (DNA) I 0.0366568
ABLIM3 actin binding LIM protein family, member 3 0.0360959
SH3RF3 SH3 domain containing ring finger 3 0.0356977
RBMS3 RNA binding motif, single stranded interacting protein 3 0.0341772
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) 0.032199
MT1E metallothionein 1E 0.0299592
ANGPTL4 angiopoietin-like 4 0.0298942
FAM13A family with sequence similarity 13, member A 0.0291867
MYO1B myosin IB 0.029125
HIPK2 homeodomain interacting protein kinase 2 0.0266975
LAMB1 laminin, beta 1 0.0263493
FTH1 ferritin, heavy polypeptide 1 0.0259368
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0254516
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0239709
HIP1 huntingtin interacting protein 1 0.0239571
PID1 phosphotyrosine interaction domain containing 1 0.021219
SDK1 sidekick cell adhesion molecule 1 0.0211062
PHC2 polyhomeotic homolog 2 (Drosophila) 0.0209712
ZEB2 zinc finger E-box binding homeobox 2 0.0205514
CALD1 caldesmon 1 0.0187366
DIP2C DIP2 disco-interacting protein 2 homolog C (Drosophila) 0.0183112
LPAR1 lysophosphatidic acid receptor 1 0.0179138
MSN moesin 0.0163056
ACSL1 acyl-CoA synthetase long-chain family member 1 0.0157809
PCBP3 poly(rC) binding protein 3 0.0155435
JPH2 junctophilin 2 0.0155285
DNER delta/notch-like EGF repeat containing 0.0151887
PAPSS2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 0.0149376
ERRFI1 ERBB receptor feedback inhibitor 1 0.014908
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.014513
NAMPT nicotinamide phosphoribosyltransferase 0.0144341
MT1X metallothionein 1X 0.014116
COL4A2 collagen, type IV, alpha 2 0.0138527
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0137708
KLF9 Kruppel-like factor 9 0.0134821
FOXO3 forkhead box O3 0.0134677
LOX lysyl oxidase 0.0132227
CCN4 cellular communication network factor 4 0.012965
B4GALT1 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 0.0127158
POTEF POTE ankyrin domain family, member F 0.0125707
CACNA1C calcium channel, voltage-dependent, L type, alpha 1C subunit 0.0122527
UGP2 UDP-glucose pyrophosphorylase 2 0.0121613
RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 0.0120773
JARID2 jumonji, AT rich interactive domain 2 0.0120411
HS2ST1 heparan sulfate 2-O-sulfotransferase 1 0.0119272
PTPN1 protein tyrosine phosphatase, non-receptor type 1 0.0116724
PLIN2 perilipin 2 0.0112553
FKBP5 FK506 binding protein 5 0.0112427
PACSIN2 protein kinase C and casein kinase substrate in neurons 2 0.0112349
FOXO1 forkhead box O1 0.011069
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.0106811
PDGFRA platelet-derived growth factor receptor, alpha polypeptide 0.0106606
SVEP1 sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 0.0105787
TSC22D3 TSC22 domain family, member 3 0.0105146
CD109 CD109 molecule 0.0104153
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0103492
CHD9 chromodomain helicase DNA binding protein 9 0.0102234
ARID5B AT rich interactive domain 5B (MRF1-like) 0.0101635
FMN1 formin 1 0.0101472
F3 coagulation factor III (thromboplastin, tissue factor) 0.00967184
DAAM2 dishevelled associated activator of morphogenesis 2 0.00953352
BCL2L1 BCL2-like 1 0.0094865
LDHA lactate dehydrogenase A 0.00912283
IRS2 insulin receptor substrate 2 0.0090109
CHN1 chimerin 1 0.00883923
BCL9L B-cell CLL/lymphoma 9-like 0.0087375
GYS1 glycogen synthase 1 (muscle) 0.00868412
NCOA3 nuclear receptor coactivator 3 0.00866843
DENND3 DENN/MADD domain containing 3 0.00832672
VEGFA vascular endothelial growth factor A 0.0083142
UBE2E1 ubiquitin-conjugating enzyme E2E 1 0.00817943
SNED1 sushi, nidogen and EGF-like domains 1 0.00799593
WEE1 WEE1 G2 checkpoint kinase 0.00790139
DCN decorin 0.00770291
KLF6 Kruppel-like factor 6 0.00757079
ZFAND5 zinc finger, AN1-type domain 5 0.00755783
ZNF608 zinc finger protein 608 0.00748244
TRAM2 translocation associated membrane protein 2 0.0074614
ZFHX3 zinc finger homeobox 3 0.00728534
CCND3 cyclin D3 0.00725125
RPS4X ribosomal protein S4, X-linked 0.00721777
SSR1 signal sequence receptor, alpha 0.00709914
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.00704074
TES testin LIM domain protein 0.00691322
TOX2 TOX high mobility group box family member 2 0.00691321
RPL3 ribosomal protein L3 0.00687605
YEATS2 YEATS domain containing 2 0.0068404
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) 0.00673068
COL4A1 collagen, type IV, alpha 1 0.00669308
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0066744
GLUL glutamate-ammonia ligase 0.0064351

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.196565
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.186728
STC1 stanniocalcin 1 -0.0925629
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0840105
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0729216
CD44 CD44 molecule (Indian blood group) -0.0699614
NDRG1 N-myc downstream regulated 1 -0.0691662
B2M beta-2-microglobulin -0.0683589
COL1A2 collagen, type I, alpha 2 -0.0661966
HLA-B major histocompatibility complex, class I, B -0.0607223
FRMD4A FERM domain containing 4A -0.0561598
UBC ubiquitin C -0.0554075
TFPI2 tissue factor pathway inhibitor 2 -0.0496576
TIMP3 TIMP metallopeptidase inhibitor 3 -0.0495936
COL1A1 collagen, type I, alpha 1 -0.048371
EXT1 exostosin glycosyltransferase 1 -0.0463586
PSD3 pleckstrin and Sec7 domain containing 3 -0.0453027
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0436999
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0370682
FNDC3B fibronectin type III domain containing 3B -0.033317
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0332455
FTL ferritin, light polypeptide -0.0331214
ENO1 enolase 1, (alpha) -0.0316965
IFI6 interferon, alpha-inducible protein 6 -0.0312218
CEMIP cell migration inducing protein, hyaluronan binding -0.030572
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0304676
INHBA inhibin, beta A -0.0301223
DLG1 discs, large homolog 1 (Drosophila) -0.0296408
ASPH aspartate beta-hydroxylase -0.0295182
IER3 immediate early response 3 -0.0292911
RPS27A ribosomal protein S27a -0.0292736
PALM2AKAP2 PALM2 and AKAP2 fusion -0.0289255
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0286268
TRIO trio Rho guanine nucleotide exchange factor -0.0285666
WWTR1 WW domain containing transcription regulator 1 -0.0284519
MCTP2 multiple C2 domains, transmembrane 2 -0.0283531
CALU calumenin -0.0282881
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0281453
TPM1 tropomyosin 1 (alpha) -0.0281066
PDIA3 protein disulfide isomerase family A, member 3 -0.0273619
LOXL2 lysyl oxidase-like 2 -0.0271472
SMAD3 SMAD family member 3 -0.0269121
CALR calreticulin -0.0268538
TMSB10 thymosin beta 10 -0.0265704
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0264744
IL1B interleukin 1, beta -0.0262198
PTMA prothymosin, alpha -0.0252482
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0249785
COL6A1 collagen, type VI, alpha 1 -0.0246209
NAV1 neuron navigator 1 -0.0241349
RUNX1 runt-related transcription factor 1 -0.0237096
CLIC4 chloride intracellular channel 4 -0.02327
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0231971
GOLGA4 golgin A4 -0.0222217
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough -0.0222038
TMEM178B transmembrane protein 178B -0.0219394
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.0219117
HDAC9 histone deacetylase 9 -0.0218086
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0216951
CDCP1 CUB domain containing protein 1 -0.0216615
COL6A2 collagen, type VI, alpha 2 -0.0214033
SLIT2 slit homolog 2 (Drosophila) -0.021359
RAB7A RAB7A, member RAS oncogene family -0.0209714
ZEB1 zinc finger E-box binding homeobox 1 -0.0209549
PGK1 phosphoglycerate kinase 1 -0.0206053
IFI16 interferon, gamma-inducible protein 16 -0.0205423
SP100 SP100 nuclear antigen -0.0203567
HLA-A major histocompatibility complex, class I, A -0.0203149
EML5 echinoderm microtubule associated protein like 5 -0.0202841
ANXA2 annexin A2 -0.0202776
KMT2E lysine (K)-specific methyltransferase 2E -0.020224
CDH13 cadherin 13 -0.0200942
AFAP1 actin filament associated protein 1 -0.0200871
DSCAM Down syndrome cell adhesion molecule -0.0199907
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0198317
IFIH1 interferon induced with helicase C domain 1 -0.0196163
PTK2 protein tyrosine kinase 2 -0.0195895
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0195852
MMP14 matrix metallopeptidase 14 (membrane-inserted) -0.0193978
FAM20C family with sequence similarity 20, member C -0.0193938
FAM107B family with sequence similarity 107, member B -0.0192992
ZBTB20 zinc finger and BTB domain containing 20 -0.0189857
TPT1 tumor protein, translationally-controlled 1 -0.0187205
APCDD1L adenomatosis polyposis coli down-regulated 1-like -0.0186383
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.018391
NRP1 neuropilin 1 -0.0181119
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0179152
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.017848
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0177212
IGFBP3 insulin-like growth factor binding protein 3 -0.0175546
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0175413
ACTN4 actinin, alpha 4 -0.017507
TNNC1 troponin C type 1 (slow) -0.0172705
CANX calnexin -0.0171346
JUN jun proto-oncogene -0.017024
ICAM1 intercellular adhesion molecule 1 -0.0169171
PMEPA1 prostate transmembrane protein, androgen induced 1 -0.0167623
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0166599
NRIP1 nuclear receptor interacting protein 1 -0.0166382
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0165953