Betamethasone dipropionate_hTERT-HPNE Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Betamethasone dipropionate perturbation in hTERT-HPNE cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Betamethasone dipropionate_hTERT-HPNE drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FN1 fibronectin 1 0.247413
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.204981
AKAP12 A kinase (PRKA) anchor protein 12 0.0872525
COL1A1 collagen, type I, alpha 1 0.0753324
HIPK2 homeodomain interacting protein kinase 2 0.0729708
PAPPA pregnancy-associated plasma protein A, pappalysin 1 0.0585713
LTBP1 latent transforming growth factor beta binding protein 1 0.0493399
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0452378
HLA-B major histocompatibility complex, class I, B 0.0399864
TPT1 tumor protein, translationally-controlled 1 0.0398697
STXBP5 syntaxin binding protein 5 (tomosyn) 0.0389783
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.0384159
EPS8 epidermal growth factor receptor pathway substrate 8 0.0379367
LPP LIM domain containing preferred translocation partner in lipoma 0.0341507
DNER delta/notch-like EGF repeat containing 0.032251
VCL vinculin 0.0322303
SSBP2 single-stranded DNA binding protein 2 0.0311228
IGF1R insulin-like growth factor 1 receptor 0.0297948
CAVIN1 caveolae associated protein 1 0.0294824
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0282707
HMGA2 high mobility group AT-hook 2 0.0280288
ZFP36L1 ZFP36 ring finger protein-like 1 0.0278474
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0265157
MAML2 mastermind-like 2 (Drosophila) 0.0262873
LDHA lactate dehydrogenase A 0.0259469
POTEF POTE ankyrin domain family, member F 0.0255268
MED13L mediator complex subunit 13-like 0.024449
AHNAK AHNAK nucleoprotein 0.0243986
COL3A1 collagen, type III, alpha 1 0.0241193
PDE4D phosphodiesterase 4D, cAMP-specific 0.024093
PID1 phosphotyrosine interaction domain containing 1 0.023543
LOX lysyl oxidase 0.0233934
PTPRG protein tyrosine phosphatase, receptor type, G 0.0231357
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0231144
SH3RF3 SH3 domain containing ring finger 3 0.0230816
ASPH aspartate beta-hydroxylase 0.0229817
PRKG1 protein kinase, cGMP-dependent, type I 0.0222364
PTX3 pentraxin 3, long 0.0222303
FKBP5 FK506 binding protein 5 0.0215992
PTMA prothymosin, alpha 0.0212703
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 0.0210535
ANKRD28 ankyrin repeat domain 28 0.0207123
ANXA2 annexin A2 0.0205595
MYH9 myosin, heavy chain 9, non-muscle 0.0204441
APP amyloid beta (A4) precursor protein 0.0201147
VGLL3 vestigial-like family member 3 0.0198222
PALM2AKAP2 PALM2 and AKAP2 fusion 0.01962
WSB1 WD repeat and SOCS box containing 1 0.0191297
SRGN serglycin 0.0190664
CDH13 cadherin 13 0.0190524
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0187928
PRELID2 PRELI domain containing 2 0.0185529
MT2A metallothionein 2A 0.0180273
JAK1 Janus kinase 1 0.0177416
IGF2 insulin-like growth factor 2 0.0175615
MACF1 microtubule-actin crosslinking factor 1 0.0175456
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.017311
IRS2 insulin receptor substrate 2 0.0171683
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0171418
FNDC3A fibronectin type III domain containing 3A 0.0170884
NAA16 N(alpha)-acetyltransferase 16, NatA auxiliary subunit 0.0170679
ACTG1 actin gamma 1 0.0167815
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.0166908
PTPRM protein tyrosine phosphatase, receptor type, M 0.0166564
TMEM87A transmembrane protein 87A 0.0164986
TPM4 tropomyosin 4 0.0163916
MBNL1 muscleblind-like splicing regulator 1 0.0163526
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0163441
PSD3 pleckstrin and Sec7 domain containing 3 0.0163032
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0160853
NAP1L1 nucleosome assembly protein 1-like 1 0.0157765
RBMS3 RNA binding motif, single stranded interacting protein 3 0.0157003
ZFHX3 zinc finger homeobox 3 0.0155775
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0155675
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0153078
NPAS2 neuronal PAS domain protein 2 0.0151862
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0149442
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0148967
AKAP13 A kinase (PRKA) anchor protein 13 0.0147274
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0146644
FARP1 FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) 0.0146272
DIP2C DIP2 disco-interacting protein 2 homolog C (Drosophila) 0.0145224
RPL26 ribosomal protein L26 0.014462
INTS6 integrator complex subunit 6 0.0144271
AEBP2 AE binding protein 2 0.0143985
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0143191
ARHGAP22 Rho GTPase activating protein 22 0.0140896
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0140869
SFTPA2 surfactant protein A2 0.0137692
DDR2 discoidin domain receptor tyrosine kinase 2 0.0137374
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0137047
ACTR3 ARP3 actin-related protein 3 homolog (yeast) 0.0135654
ANKRD11 ankyrin repeat domain 11 0.0133787
ZFAND5 zinc finger, AN1-type domain 5 0.0133683
RPS8 ribosomal protein S8 0.0133376
FUS FUS RNA binding protein 0.0133056
NEDD4 neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase 0.0131734
UGP2 UDP-glucose pyrophosphorylase 2 0.0131068
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 0.0130357
CEMIP cell migration inducing protein, hyaluronan binding 0.0129071

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.176723
VIM vimentin -0.119764
INHBA inhibin, beta A -0.113475
NDRG1 N-myc downstream regulated 1 -0.102682
STC1 stanniocalcin 1 -0.0806205
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type -0.0791975
CD44 CD44 molecule (Indian blood group) -0.0620518
ATP13A3 ATPase type 13A3 -0.056869
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0461109
SGIP1 SH3-domain GRB2-like (endophilin) interacting protein 1 -0.0410258
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0401708
ARHGAP21 Rho GTPase activating protein 21 -0.0373976
FTL ferritin, light polypeptide -0.036067
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0354613
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats -0.0345905
RUNX1 runt-related transcription factor 1 -0.0338278
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0313596
ELL2 elongation factor, RNA polymerase II, 2 -0.0309941
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0307715
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0297716
PDE8A phosphodiesterase 8A -0.0285778
LGALS1 lectin, galactoside-binding, soluble, 1 -0.0280487
LOC112694756 uncharaterized LOC112694756 -0.0276998
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0262421
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0252383
MYO10 myosin X -0.0248691
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0247389
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.024434
TM4SF1 transmembrane 4 L six family member 1 -0.0231066
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.0230929
HILPDA hypoxia inducible lipid droplet-associated -0.0230008
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0227546
RNF145 ring finger protein 145 -0.0225107
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0224945
SMAD3 SMAD family member 3 -0.0222068
FNDC3B fibronectin type III domain containing 3B -0.0221541
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0221182
PLPP3 phospholipid phosphatase 3 -0.0203841
ADGRB3 adhesion G protein-coupled receptor B3 -0.019899
MAP1B microtubule-associated protein 1B -0.0196565
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0194083
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) -0.0194057
FRMD6 FERM domain containing 6 -0.0186058
EMP1 epithelial membrane protein 1 -0.0185303
PFN1 profilin 1 -0.0185046
IER3 immediate early response 3 -0.018304
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0182472
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit -0.0181854
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0176503
TOP2A topoisomerase (DNA) II alpha 170kDa -0.017318
TRIO trio Rho guanine nucleotide exchange factor -0.0173089
COL6A3 collagen, type VI, alpha 3 -0.017289
ADAMTS16 ADAM metallopeptidase with thrombospondin type 1 motif, 16 -0.0171247
LMAN1 lectin, mannose-binding, 1 -0.0166625
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 -0.0164894
ARRDC3 arrestin domain containing 3 -0.0164601
ADM adrenomedullin -0.0164025
COL1A2 collagen, type I, alpha 2 -0.0163239
TPI1 triosephosphate isomerase 1 -0.0154862
ANO6 anoctamin 6 -0.0153554
KLF7 Kruppel-like factor 7 (ubiquitous) -0.015245
FOSL1 FOS-like antigen 1 -0.0151181
NGLY1 N-glycanase 1 -0.0150554
GPHN gephyrin -0.0149257
DLG1 discs, large homolog 1 (Drosophila) -0.0148939
INSIG1 insulin induced gene 1 -0.0144703
RARS1 arginyl-tRNA synthetase 1 -0.0144644
MRPS6 mitochondrial ribosomal protein S6 -0.0142516
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0141751
RAI14 retinoic acid induced 14 -0.0141397
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.0140414
B2M beta-2-microglobulin -0.0139759
APAF1 apoptotic peptidase activating factor 1 -0.0139302
USP3 ubiquitin specific peptidase 3 -0.0137838
BHLHE40 basic helix-loop-helix family, member e40 -0.0137662
IL6 interleukin 6 -0.0135748
IKBIP IKBKB interacting protein -0.0133657
DUSP10 dual specificity phosphatase 10 -0.013212
ZNF292 zinc finger protein 292 -0.0129964
SHB Src homology 2 domain containing adaptor protein B -0.0128405
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha -0.0127792
LAMC1 laminin, gamma 1 (formerly LAMB2) -0.0127548
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.0124354
AXL AXL receptor tyrosine kinase -0.012432
LHFPL2 lipoma HMGIC fusion partner-like 2 -0.0121649
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 -0.0120518
KMT2E lysine (K)-specific methyltransferase 2E -0.0120352
CALU calumenin -0.0119532
CHD1L chromodomain helicase DNA binding protein 1-like -0.0118392
PTBP3 polypyrimidine tract binding protein 3 -0.0117912
VEGFC vascular endothelial growth factor C -0.0117901
RAI1 retinoic acid induced 1 -0.0117593
JARID2 jumonji, AT rich interactive domain 2 -0.0117209
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0116761
LRIG1 leucine-rich repeats and immunoglobulin-like domains 1 -0.0116565
SNX9 sorting nexin 9 -0.0116522
NT5E 5'-nucleotidase, ecto (CD73) -0.0116337
TAPBP TAP binding protein (tapasin) -0.0115053
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.0114952
GOLGA4 golgin A4 -0.0114396