| Dataset | Tahoe Therapeutics Tahoe 100M Perturbation Atlas |
| Category | transcriptomics |
| Type | cell type |
| Description | Bexarotene perturbation in CHP-212 cell line (Tahoe Therapeutics) |
| Similar Terms | |
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200 genes differentially expressed following the Bexarotene_CHP-212 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.
| Symbol | Name | Standardized Value |
|---|---|---|
| AKAP12 | A kinase (PRKA) anchor protein 12 | 0.319969 |
| DPH6 | diphthamine biosynthesis 6 | 0.0841705 |
| PLAT | plasminogen activator, tissue | 0.0825157 |
| VMP1 | vacuole membrane protein 1 | 0.0818372 |
| FAM13A | family with sequence similarity 13, member A | 0.0762482 |
| GBE1 | glucan (1,4-alpha-), branching enzyme 1 | 0.0749641 |
| FNDC3B | fibronectin type III domain containing 3B | 0.058788 |
| ITPRID2 | ITPR interacting domain containing 2 | 0.0532945 |
| STC1 | stanniocalcin 1 | 0.0503687 |
| MEF2A | myocyte enhancer factor 2A | 0.0458366 |
| ZBTB20 | zinc finger and BTB domain containing 20 | 0.0452548 |
| P4HA1 | prolyl 4-hydroxylase, alpha polypeptide I | 0.0421968 |
| PSD3 | pleckstrin and Sec7 domain containing 3 | 0.0409105 |
| TENT5A | terminal nucleotidyltransferase 5A | 0.0353361 |
| DST | dystonin | 0.0351797 |
| PRKD1 | protein kinase D1 | 0.0349625 |
| GPC5 | glypican 5 | 0.0344376 |
| BAZ2B | bromodomain adjacent to zinc finger domain, 2B | 0.0338132 |
| ENPP2 | ectonucleotide pyrophosphatase/phosphodiesterase 2 | 0.0331725 |
| SLC25A37 | solute carrier family 25 (mitochondrial iron transporter), member 37 | 0.0306265 |
| IGFBP3 | insulin-like growth factor binding protein 3 | 0.0296325 |
| NGLY1 | N-glycanase 1 | 0.0287376 |
| IGFBP5 | insulin-like growth factor binding protein 5 | 0.0287019 |
| ADARB1 | adenosine deaminase, RNA-specific, B1 | 0.0286085 |
| CADM1 | cell adhesion molecule 1 | 0.028486 |
| SMAD3 | SMAD family member 3 | 0.0283602 |
| LIMCH1 | LIM and calponin homology domains 1 | 0.0282651 |
| ATRNL1 | attractin-like 1 | 0.0279464 |
| PRKRIP1 | PRKR interacting protein 1 (IL11 inducible) | 0.0276405 |
| PITPNC1 | phosphatidylinositol transfer protein, cytoplasmic 1 | 0.027624 |
| ATM | ATM serine/threonine kinase | 0.0271112 |
| VEGFA | vascular endothelial growth factor A | 0.0266694 |
| AHR | aryl hydrocarbon receptor | 0.026539 |
| CEMIP | cell migration inducing protein, hyaluronan binding | 0.026273 |
| CRYBG3 | beta-gamma crystallin domain containing 3 | 0.026194 |
| ZCCHC7 | zinc finger, CCHC domain containing 7 | 0.0256357 |
| MACF1 | microtubule-actin crosslinking factor 1 | 0.0255621 |
| MBD5 | methyl-CpG binding domain protein 5 | 0.0255136 |
| GULP1 | GULP, engulfment adaptor PTB domain containing 1 | 0.0250042 |
| CALD1 | caldesmon 1 | 0.0248089 |
| PTPRD | protein tyrosine phosphatase, receptor type, D | 0.0247972 |
| ROBO2 | roundabout, axon guidance receptor, homolog 2 (Drosophila) | 0.0246108 |
| ITGA2 | integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) | 0.0244253 |
| ERRFI1 | ERBB receptor feedback inhibitor 1 | 0.024314 |
| MINDY2 | MINDY lysine 48 deubiquitinase 2 | 0.0242755 |
| PLEKHA2 | pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2 | 0.0237395 |
| PHC3 | polyhomeotic homolog 3 (Drosophila) | 0.0236593 |
| RAD51B | RAD51 paralog B | 0.0233648 |
| NFAT5 | nuclear factor of activated T-cells 5, tonicity-responsive | 0.023071 |
| RUNX1 | runt-related transcription factor 1 | 0.0229969 |
| RBMS1 | RNA binding motif, single stranded interacting protein 1 | 0.0229179 |
| FNDC3A | fibronectin type III domain containing 3A | 0.0229019 |
| HILPDA | hypoxia inducible lipid droplet-associated | 0.0228513 |
| CTNNB1 | catenin (cadherin-associated protein), beta 1, 88kDa | 0.0228482 |
| ANTXR1 | anthrax toxin receptor 1 | 0.022606 |
| PPFIBP1 | PTPRF interacting protein, binding protein 1 (liprin beta 1) | 0.0225474 |
| CD55 | CD55 molecule, decay accelerating factor for complement (Cromer blood group) | 0.0224517 |
| ELL2 | elongation factor, RNA polymerase II, 2 | 0.0224045 |
| KIAA1217 | KIAA1217 | 0.0219198 |
| RAB1A | RAB1A, member RAS oncogene family | 0.0217087 |
| TANC2 | tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 | 0.0215432 |
| N4BP2L2 | NEDD4 binding protein 2-like 2 | 0.021414 |
| CAMKMT | calmodulin-lysine N-methyltransferase | 0.0212756 |
| KCTD16 | potassium channel tetramerization domain containing 16 | 0.0212287 |
| AKAP9 | A kinase (PRKA) anchor protein 9 | 0.0211262 |
| PLOD2 | procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 | 0.0210423 |
| SNX13 | sorting nexin 13 | 0.020959 |
| SBF2 | SET binding factor 2 | 0.0209551 |
| SDCCAG8 | serologically defined colon cancer antigen 8 | 0.0208971 |
| PAG1 | phosphoprotein membrane anchor with glycosphingolipid microdomains 1 | 0.020634 |
| GNPDA1 | glucosamine-6-phosphate deaminase 1 | 0.020577 |
| RAB6A | RAB6A, member RAS oncogene family | 0.0204024 |
| EXT1 | exostosin glycosyltransferase 1 | 0.0202929 |
| AGAP1 | ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 | 0.0202744 |
| STXBP5 | syntaxin binding protein 5 (tomosyn) | 0.0201473 |
| SMYD3 | SET and MYND domain containing 3 | 0.0200437 |
| RPS6KA3 | ribosomal protein S6 kinase, 90kDa, polypeptide 3 | 0.0199933 |
| ZXDC | ZXD family zinc finger C | 0.0199152 |
| CPED1 | cadherin-like and PC-esterase domain containing 1 | 0.0199105 |
| BPTF | bromodomain PHD finger transcription factor | 0.0198518 |
| MBTD1 | mbt domain containing 1 | 0.0197785 |
| NPAS2 | neuronal PAS domain protein 2 | 0.0197344 |
| PALM2AKAP2 | PALM2 and AKAP2 fusion | 0.0197149 |
| BNIP3 | BCL2/adenovirus E1B 19kDa interacting protein 3 | 0.0196342 |
| PGK1 | phosphoglycerate kinase 1 | 0.0195529 |
| LINGO2 | leucine rich repeat and Ig domain containing 2 | 0.019514 |
| ZMIZ1 | zinc finger, MIZ-type containing 1 | 0.0193651 |
| TIMP3 | TIMP metallopeptidase inhibitor 3 | 0.0191447 |
| RPL34 | ribosomal protein L34 | 0.0190914 |
| SMC5 | structural maintenance of chromosomes 5 | 0.0189626 |
| SKIC3 | SKI3 subunit of superkiller complex | 0.0189606 |
| ANGPTL4 | angiopoietin-like 4 | 0.0189516 |
| IRF2BP2 | interferon regulatory factor 2 binding protein 2 | 0.0188936 |
| NES | nestin | 0.0188573 |
| NBPF15 | neuroblastoma breakpoint family, member 15 | 0.0187296 |
| VPS13C | vacuolar protein sorting 13 homolog C (S. cerevisiae) | 0.01862 |
| GCC2 | GRIP and coiled-coil domain containing 2 | 0.0185266 |
| FLT1 | fms-related tyrosine kinase 1 | 0.018392 |
| HDAC8 | histone deacetylase 8 | 0.0182393 |
| EEA1 | early endosome antigen 1 | 0.0182374 |
| Symbol | Name | Standardized Value |
|---|---|---|
| DDX1 | DEAD (Asp-Glu-Ala-Asp) box helicase 1 | -0.26058 |
| HSP90AB1 | heat shock protein 90kDa alpha (cytosolic), class B member 1 | -0.0899832 |
| LPIN1 | lipin 1 | -0.0856312 |
| SYT1 | synaptotagmin I | -0.085026 |
| PTMA | prothymosin, alpha | -0.0805255 |
| COL1A1 | collagen, type I, alpha 1 | -0.071565 |
| HSP90AA1 | heat shock protein 90kDa alpha (cytosolic), class A member 1 | -0.0660761 |
| HSP90B1 | heat shock protein 90kDa beta (Grp94), member 1 | -0.0616199 |
| VIM | vimentin | -0.0612119 |
| HNRNPA2B1 | heterogeneous nuclear ribonucleoprotein A2/B1 | -0.0597308 |
| HSPA5 | heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) | -0.0595411 |
| AHNAK | AHNAK nucleoprotein | -0.0576928 |
| LSAMP | limbic system-associated membrane protein | -0.0562783 |
| SSBP2 | single-stranded DNA binding protein 2 | -0.0551101 |
| NCAM2 | neural cell adhesion molecule 2 | -0.0517851 |
| CADM2 | cell adhesion molecule 2 | -0.0506844 |
| COL3A1 | collagen, type III, alpha 1 | -0.0492189 |
| LMNA | lamin A/C | -0.0476939 |
| CENPF | centromere protein F, 350/400kDa | -0.0461969 |
| NALF1 | NALCN channel auxiliary factor 1 | -0.0461637 |
| HELZ | helicase with zinc finger | -0.0455476 |
| GNAS | GNAS complex locus | -0.0451104 |
| POTEF | POTE ankyrin domain family, member F | -0.0445235 |
| DDX5 | DEAD (Asp-Glu-Ala-Asp) box helicase 5 | -0.0430561 |
| TOP2A | topoisomerase (DNA) II alpha 170kDa | -0.0424138 |
| NRG1 | neuregulin 1 | -0.0405045 |
| MAP1B | microtubule-associated protein 1B | -0.0395151 |
| AOPEP | aminopeptidase O (putative) | -0.0394226 |
| HMGB2 | high mobility group box 2 | -0.0390177 |
| NUCKS1 | nuclear casein kinase and cyclin-dependent kinase substrate 1 | -0.0368821 |
| PCBP2 | poly(rC) binding protein 2 | -0.0366579 |
| HNRNPC | heterogeneous nuclear ribonucleoprotein C (C1/C2) | -0.0355598 |
| USP3 | ubiquitin specific peptidase 3 | -0.0355012 |
| UNC5C | unc-5 homolog C (C. elegans) | -0.0340846 |
| ACTG1 | actin gamma 1 | -0.0338356 |
| TCF7L2 | transcription factor 7-like 2 (T-cell specific, HMG-box) | -0.0337773 |
| RPS27A | ribosomal protein S27a | -0.0333934 |
| NAMPT | nicotinamide phosphoribosyltransferase | -0.0329707 |
| ENAH | enabled homolog (Drosophila) | -0.0324612 |
| KMT2C | lysine (K)-specific methyltransferase 2C | -0.0323343 |
| PPM1D | protein phosphatase, Mg2+/Mn2+ dependent, 1D | -0.031424 |
| SCN9A | sodium channel, voltage gated, type IX alpha subunit | -0.0305503 |
| ARL6IP1 | ADP-ribosylation factor-like 6 interacting protein 1 | -0.0304815 |
| PDIA3 | protein disulfide isomerase family A, member 3 | -0.0304378 |
| TBL1XR1 | transducin (beta)-like 1 X-linked receptor 1 | -0.0302911 |
| SEPTIN7 | septin 7 | -0.030008 |
| TRIB2 | tribbles pseudokinase 2 | -0.0297525 |
| ACSL3 | acyl-CoA synthetase long-chain family member 3 | -0.0296752 |
| MEIS2 | Meis homeobox 2 | -0.029665 |
| FMN1 | formin 1 | -0.0296091 |
| TPST1 | tyrosylprotein sulfotransferase 1 | -0.0294539 |
| P4HB | prolyl 4-hydroxylase, beta polypeptide | -0.0291788 |
| MAN1A1 | mannosidase, alpha, class 1A, member 1 | -0.0290778 |
| QKI | QKI, KH domain containing, RNA binding | -0.0289946 |
| PLPP1 | phospholipid phosphatase 1 | -0.0278487 |
| XRCC5 | X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) | -0.0275856 |
| DYNC1H1 | dynein, cytoplasmic 1, heavy chain 1 | -0.0273345 |
| SPAG9 | sperm associated antigen 9 | -0.0272587 |
| FOXK2 | forkhead box K2 | -0.0266856 |
| RPL23 | ribosomal protein L23 | -0.026667 |
| CDH10 | cadherin 10, type 2 (T2-cadherin) | -0.0263263 |
| PTK2 | protein tyrosine kinase 2 | -0.0255619 |
| NRP1 | neuropilin 1 | -0.0255587 |
| ARID1B | AT rich interactive domain 1B (SWI1-like) | -0.0255026 |
| PTPRK | protein tyrosine phosphatase, receptor type, K | -0.0253685 |
| LRFN5 | leucine rich repeat and fibronectin type III domain containing 5 | -0.0253496 |
| UBC | ubiquitin C | -0.0251458 |
| AUTS2 | autism susceptibility candidate 2 | -0.0250885 |
| WAC | WW domain containing adaptor with coiled-coil | -0.0249479 |
| PRKCA | protein kinase C, alpha | -0.024733 |
| YWHAZ | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta | -0.0245524 |
| RUNX1T1 | runt-related transcription factor 1; translocated to, 1 (cyclin D-related) | -0.0243629 |
| SMG7 | SMG7 nonsense mediated mRNA decay factor | -0.0242126 |
| TMSB10 | thymosin beta 10 | -0.0241726 |
| RNF213 | ring finger protein 213 | -0.0240177 |
| KMT2E | lysine (K)-specific methyltransferase 2E | -0.0239135 |
| EEF2 | eukaryotic translation elongation factor 2 | -0.0237506 |
| RYBP | RING1 and YY1 binding protein | -0.023414 |
| MMP2 | matrix metallopeptidase 2 | -0.0234071 |
| MATR3 | matrin 3 | -0.0233899 |
| CCND1 | cyclin D1 | -0.0233761 |
| HNRNPU | heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) | -0.0233074 |
| RBMS3 | RNA binding motif, single stranded interacting protein 3 | -0.023124 |
| JPT1 | Jupiter microtubule associated homolog 1 | -0.0227389 |
| EIF3A | eukaryotic translation initiation factor 3, subunit A | -0.0227091 |
| PPP2R2A | protein phosphatase 2, regulatory subunit B, alpha | -0.0225665 |
| ADAM9 | ADAM metallopeptidase domain 9 | -0.022551 |
| USP9X | ubiquitin specific peptidase 9, X-linked | -0.02234 |
| TPT1 | tumor protein, translationally-controlled 1 | -0.0222027 |
| SLC38A2 | solute carrier family 38, member 2 | -0.0221829 |
| TLK2 | tousled-like kinase 2 | -0.0221241 |
| MAPK6 | mitogen-activated protein kinase 6 | -0.0220238 |
| NOP58 | NOP58 ribonucleoprotein | -0.0219102 |
| ADAR | adenosine deaminase, RNA-specific | -0.0217705 |
| CHD4 | chromodomain helicase DNA binding protein 4 | -0.0216292 |
| HAND2 | heart and neural crest derivatives expressed 2 | -0.0216177 |
| LGR5 | leucine-rich repeat containing G protein-coupled receptor 5 | -0.0215775 |
| ZMYM2 | zinc finger, MYM-type 2 | -0.0215531 |
| HNRNPH1 | heterogeneous nuclear ribonucleoprotein H1 (H) | -0.0215422 |
| MAP4 | microtubule-associated protein 4 | -0.0214539 |
