Bimatoprost_A-172 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bimatoprost perturbation in A-172 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bimatoprost_A-172 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PODXL podocalyxin-like 0.134759
ASPH aspartate beta-hydroxylase 0.0574006
MSN moesin 0.0562679
CALR calreticulin 0.0536766
FN1 fibronectin 1 0.0480949
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0435953
COL5A1 collagen, type V, alpha 1 0.0425934
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 0.040188
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0374685
PRSS23 protease, serine, 23 0.0370864
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0359877
CDH13 cadherin 13 0.034783
CANX calnexin 0.034589
DST dystonin 0.0337697
MACF1 microtubule-actin crosslinking factor 1 0.0328808
ANKRD11 ankyrin repeat domain 11 0.0318747
RRM2 ribonucleotide reductase M2 0.0316959
RAI1 retinoic acid induced 1 0.0307152
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1 0.0302842
TMSB4X thymosin beta 4, X-linked 0.0298996
AHNAK2 AHNAK nucleoprotein 2 0.0297237
BZW1 basic leucine zipper and W2 domains 1 0.0295969
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0290577
DSPP dentin sialophosphoprotein 0.0281608
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0275716
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0264261
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0262908
CACNA2D3 calcium channel, voltage-dependent, alpha 2/delta subunit 3 0.0260365
HDAC9 histone deacetylase 9 0.0255898
VEGFC vascular endothelial growth factor C 0.0254603
PTMA prothymosin, alpha 0.0243307
SORBS2 sorbin and SH3 domain containing 2 0.0238985
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0237752
ENO1 enolase 1, (alpha) 0.0229588
LDHA lactate dehydrogenase A 0.0227236
NEK7 NIMA-related kinase 7 0.0226268
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0221869
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.0221124
LNPEP leucyl/cystinyl aminopeptidase 0.021565
SET SET nuclear proto-oncogene 0.0213561
EZR ezrin 0.0211351
AFDN afadin, adherens junction formation factor 0.021034
TPM3 tropomyosin 3 0.0207807
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0206963
ADAM9 ADAM metallopeptidase domain 9 0.020532
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.020022
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0192852
RASAL2 RAS protein activator like 2 0.0192442
GADD45A growth arrest and DNA-damage-inducible, alpha 0.0192057
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0187673
COPA coatomer protein complex, subunit alpha 0.018622
APP amyloid beta (A4) precursor protein 0.0186033
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0183524
MCL1 myeloid cell leukemia 1 0.0183227
HMGB2 high mobility group box 2 0.0181671
PBX3 pre-B-cell leukemia homeobox 3 0.0181079
PUM2 pumilio RNA-binding family member 2 0.0175484
SLC16A3 solute carrier family 16 (monocarboxylate transporter), member 3 0.0171096
LRRFIP2 leucine rich repeat (in FLII) interacting protein 2 0.0170758
CDC73 cell division cycle 73 0.0170713
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0169403
MYH9 myosin, heavy chain 9, non-muscle 0.0167661
GDI2 GDP dissociation inhibitor 2 0.0165926
PLXNA2 plexin A2 0.0163664
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0163624
FAM13B family with sequence similarity 13, member B 0.0157979
TMF1 TATA element modulatory factor 1 0.0156824
CYTH3 cytohesin 3 0.0156647
SLCO1B3 solute carrier organic anion transporter family, member 1B3 0.0154437
PDLIM5 PDZ and LIM domain 5 0.0154093
PTK2 protein tyrosine kinase 2 0.0153237
TUBA1B tubulin, alpha 1b 0.0152786
BCLAF1 BCL2-associated transcription factor 1 0.015239
HAPSTR1 HUWE1 associated protein modifying stress responses 0.0151803
RPS12 ribosomal protein S12 0.0149603
LAMC2 laminin, gamma 2 0.0147891
CERS2 ceramide synthase 2 0.0147242
DIAPH3 diaphanous-related formin 3 0.0146579
KIF18B kinesin family member 18B 0.0145317
MED13L mediator complex subunit 13-like 0.0145281
FXR1 fragile X mental retardation, autosomal homolog 1 0.0145074
PDE4D phosphodiesterase 4D, cAMP-specific 0.0144802
E2F7 E2F transcription factor 7 0.0144768
MBNL1 muscleblind-like splicing regulator 1 0.0144144
IFI6 interferon, alpha-inducible protein 6 0.0142926
TRIO trio Rho guanine nucleotide exchange factor 0.0142379
PSME4 proteasome (prosome, macropain) activator subunit 4 0.0142263
S100A6 S100 calcium binding protein A6 0.0142216
PICALM phosphatidylinositol binding clathrin assembly protein 0.0141494
CELF1 CUGBP, Elav-like family member 1 0.0141211
SMC4 structural maintenance of chromosomes 4 0.0140777
SH3RF1 SH3 domain containing ring finger 1 0.0140032
TMEM87A transmembrane protein 87A 0.0139416
AFF4 AF4/FMR2 family, member 4 0.0138797
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 0.0138754
CORO1C coronin, actin binding protein, 1C 0.0138131
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.0133645
CIP2A cellular inhibitor of PP2A 0.0132998
GADD45B growth arrest and DNA-damage-inducible, beta 0.0131737
PLK2 polo-like kinase 2 0.0130833

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.354571
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.112649
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.108128
LOXL2 lysyl oxidase-like 2 -0.101326
MT2A metallothionein 2A -0.100146
FBN1 fibrillin 1 -0.0951572
S100A10 S100 calcium binding protein A10 -0.094175
COL1A2 collagen, type I, alpha 2 -0.092049
HLA-B major histocompatibility complex, class I, B -0.0811703
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.079601
TMSB10 thymosin beta 10 -0.0757276
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0684722
CCND1 cyclin D1 -0.0683533
CD99 CD99 molecule -0.0658589
FNDC3B fibronectin type III domain containing 3B -0.0652022
DLG1 discs, large homolog 1 (Drosophila) -0.0633624
FTL ferritin, light polypeptide -0.059531
TPM4 tropomyosin 4 -0.0593356
POTEF POTE ankyrin domain family, member F -0.0587671
LMNA lamin A/C -0.0585027
COL3A1 collagen, type III, alpha 1 -0.0577492
TIMP2 TIMP metallopeptidase inhibitor 2 -0.0570777
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0548579
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0541572
RHOBTB3 Rho-related BTB domain containing 3 -0.0537503
IFITM1 interferon induced transmembrane protein 1 -0.0499097
SQSTM1 sequestosome 1 -0.0481632
AHNAK AHNAK nucleoprotein -0.0451946
COL5A2 collagen, type V, alpha 2 -0.0440137
STC1 stanniocalcin 1 -0.043352
HLA-C major histocompatibility complex, class I, C -0.0430777
MYO9B myosin IXB -0.0418321
DPYSL2 dihydropyrimidinase-like 2 -0.0413754
CTSB cathepsin B -0.0407152
RPL35A ribosomal protein L35a -0.040657
ACTG1 actin gamma 1 -0.0398354
HSPB1 heat shock 27kDa protein 1 -0.0396601
RPS23 ribosomal protein S23 -0.0396209
SBF2 SET binding factor 2 -0.039579
ANXA2 annexin A2 -0.0392211
PLAT plasminogen activator, tissue -0.0391345
ZBTB20 zinc finger and BTB domain containing 20 -0.039123
PKM pyruvate kinase, muscle -0.0389433
GPC6 glypican 6 -0.0389294
NAV1 neuron navigator 1 -0.038004
RRBP1 ribosome binding protein 1 -0.0373679
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0370777
RPL23 ribosomal protein L23 -0.0366882
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0361156
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0355018
RPL28 ribosomal protein L28 -0.0353173
FBXL7 F-box and leucine-rich repeat protein 7 -0.0349614
ANKIB1 ankyrin repeat and IBR domain containing 1 -0.0347856
IFITM3 interferon induced transmembrane protein 3 -0.0347701
NDRG1 N-myc downstream regulated 1 -0.0338265
DPYSL3 dihydropyrimidinase-like 3 -0.0333883
RPL32 ribosomal protein L32 -0.0333702
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0329221
HDLBP high density lipoprotein binding protein -0.0324474
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0323555
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0323436
MYOF myoferlin -0.0321113
FLNB filamin B, beta -0.0320432
RPS6 ribosomal protein S6 -0.0319261
FTH1 ferritin, heavy polypeptide 1 -0.0318508
RPS19 ribosomal protein S19 -0.0316602
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0315576
RPS5 ribosomal protein S5 -0.0314758
RPS11 ribosomal protein S11 -0.0313452
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 -0.0313083
RPS13 ribosomal protein S13 -0.0311424
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0310527
EIF1 eukaryotic translation initiation factor 1 -0.0303102
LIMS1 LIM and senescent cell antigen-like domains 1 -0.0302767
RPS8 ribosomal protein S8 -0.0294167
GNAS GNAS complex locus -0.0294004
OPTN optineurin -0.0293767
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0293177
PRRC2C proline-rich coiled-coil 2C -0.0291926
RPS15 ribosomal protein S15 -0.0288385
KDM5B lysine (K)-specific demethylase 5B -0.0287256
BHLHE40 basic helix-loop-helix family, member e40 -0.0286167
UBC ubiquitin C -0.0285368
RPLP2 ribosomal protein, large, P2 -0.0281461
BACE2 beta-site APP-cleaving enzyme 2 -0.028106
RPLP1 ribosomal protein, large, P1 -0.0280628
MTDH metadherin -0.0280327
CLU clusterin -0.0280302
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0279351
RPL19 ribosomal protein L19 -0.027916
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0277974
SLC22A23 solute carrier family 22, member 23 -0.0277338
NAV2 neuron navigator 2 -0.0275612
TAOK1 TAO kinase 1 -0.0273952
ACTN4 actinin, alpha 4 -0.0273838
RAB1A RAB1A, member RAS oncogene family -0.0272751
FUS FUS RNA binding protein -0.0268489
RPL31 ribosomal protein L31 -0.0265917
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase -0.0265825
USP34 ubiquitin specific peptidase 34 -0.0264374