Bimatoprost_COLO 205 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bimatoprost perturbation in COLO 205 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bimatoprost_COLO 205 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
LMO7 LIM domain 7 0.128619
SMAD3 SMAD family member 3 0.0630144
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 0.0549868
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 0.0421705
MYO1E myosin IE 0.040438
DNAJC15 DnaJ (Hsp40) homolog, subfamily C, member 15 0.0375523
AKAP13 A kinase (PRKA) anchor protein 13 0.0356312
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0352198
SIPA1L2 signal-induced proliferation-associated 1 like 2 0.0301446
EFNB2 ephrin-B2 0.0296639
MACC1 metastasis associated in colon cancer 1 0.0295831
PDZD8 PDZ domain containing 8 0.026139
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0255174
BAIAP2L1 BAI1-associated protein 2-like 1 0.023983
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila) 0.0225145
KYNU kynureninase 0.0216608
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0215142
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0210562
ERN1 endoplasmic reticulum to nucleus signaling 1 0.020248
DUSP10 dual specificity phosphatase 10 0.0200072
DST dystonin 0.0198727
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 0.0192859
GAREM1 GRB2 associated regulator of MAPK1 subtype 1 0.0190385
TOX3 TOX high mobility group box family member 3 0.0185288
PRSS22 protease, serine, 22 0.0183493
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0180425
CEMIP cell migration inducing protein, hyaluronan binding 0.0179538
FNIP2 folliculin interacting protein 2 0.0178783
RFFL ring finger and FYVE-like domain containing E3 ubiquitin protein ligase 0.0168183
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0168153
HKDC1 hexokinase domain containing 1 0.016651
ZSWIM6 zinc finger, SWIM-type containing 6 0.016318
XDH xanthine dehydrogenase 0.016247
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0161739
SLK STE20-like kinase 0.0157199
PADI1 peptidyl arginine deiminase, type I 0.0156461
NTN4 netrin 4 0.0154753
MCTP1 multiple C2 domains, transmembrane 1 0.0154102
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0153788
EREG epiregulin 0.0150102
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.0145789
YAP1 Yes-associated protein 1 0.0141643
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0141538
ANXA1 annexin A1 0.0141523
CXCL8 chemokine (C-X-C motif) ligand 8 0.0137525
RFX2 regulatory factor X, 2 (influences HLA class II expression) 0.0132241
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0129603
TMEM65 transmembrane protein 65 0.0129122
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0127419
DIAPH1 diaphanous-related formin 1 0.0125138
RND3 Rho family GTPase 3 0.0123934
ERRFI1 ERBB receptor feedback inhibitor 1 0.0123409
SHB Src homology 2 domain containing adaptor protein B 0.0123178
PRAG1 PEAK1 related, kinase-activating pseudokinase 1 0.0121092
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0119585
FHL2 four and a half LIM domains 2 0.011927
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0118171
PPARG peroxisome proliferator-activated receptor gamma 0.0116773
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0116222
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 0.0114322
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) 0.0111215
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0108366
UBAP1 ubiquitin associated protein 1 0.0106959
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0106458
LAMB3 laminin, beta 3 0.0106114
MYOF myoferlin 0.0105677
USP9X ubiquitin specific peptidase 9, X-linked 0.0102869
TJP1 tight junction protein 1 0.0101032
ACSL5 acyl-CoA synthetase long-chain family member 5 0.0100657
TTC19 tetratricopeptide repeat domain 19 0.00998907
SLTM SAFB-like, transcription modulator 0.00995728
SEPTIN9 septin 9 0.00994272
YBX3 Y box binding protein 3 0.00981463
IRAK2 interleukin-1 receptor-associated kinase 2 0.00973235
ADORA2B adenosine A2b receptor 0.00968738
MCU mitochondrial calcium uniporter 0.00965821
SIK3 SIK family kinase 3 0.00964625
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.00948179
GOLGA4 golgin A4 0.00941441
GK glycerol kinase 0.00934144
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 0.00929417
TUG1 taurine up-regulated 1 (non-protein coding) 0.00914636
AFAP1L2 actin filament associated protein 1-like 2 0.00911744
C3ORF52 chromosome 3 open reading frame 52 0.00911009
MAN1A1 mannosidase, alpha, class 1A, member 1 0.00904522
LURAP1L leucine rich adaptor protein 1-like 0.00902553
FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 0.00881356
PPP4R2 protein phosphatase 4, regulatory subunit 2 0.00874479
FAM120A family with sequence similarity 120A 0.00862923
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.00857106
DNTTIP1 deoxynucleotidyltransferase, terminal, interacting protein 1 0.00852006
PICALM phosphatidylinositol binding clathrin assembly protein 0.00848025
ADM adrenomedullin 0.00845667
ITPRID2 ITPR interacting domain containing 2 0.00842872
NCEH1 neutral cholesterol ester hydrolase 1 0.00840945
CTSA cathepsin A 0.00827475
PPARD peroxisome proliferator-activated receptor delta 0.00814816
ARHGAP42 Rho GTPase activating protein 42 0.00808739
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.00797547
ECE1 endothelin converting enzyme 1 0.00795237

decreased expression

Symbol Name Standardized Value
EPSTI1 epithelial stromal interaction 1 (breast) -0.146815
STAT1 signal transducer and activator of transcription 1, 91kDa -0.124844
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.120534
TPT1 tumor protein, translationally-controlled 1 -0.119524
UBC ubiquitin C -0.116078
RNF213 ring finger protein 213 -0.107599
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.10573
LYZ lysozyme -0.1029
ZMYND8 zinc finger, MYND-type containing 8 -0.101063
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.100603
B2M beta-2-microglobulin -0.0999067
XAF1 XIAP associated factor 1 -0.0939939
SP100 SP100 nuclear antigen -0.0919902
PTMA prothymosin, alpha -0.0853505
IFI6 interferon, alpha-inducible protein 6 -0.0826107
BTBD9 BTB (POZ) domain containing 9 -0.0795344
MX1 MX dynamin-like GTPase 1 -0.0787731
HLA-B major histocompatibility complex, class I, B -0.0783998
PKM pyruvate kinase, muscle -0.0761079
ARHGAP26 Rho GTPase activating protein 26 -0.0733562
RIGI RNA sensor RIG-I -0.0715034
GMDS GDP-mannose 4,6-dehydratase -0.0684646
PERP PERP, TP53 apoptosis effector -0.0681439
RABGAP1L RAB GTPase activating protein 1-like -0.0676523
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0675882
TXNIP thioredoxin interacting protein -0.0617044
C6ORF132 chromosome 6 open reading frame 132 -0.0594251
MX2 MX dynamin-like GTPase 2 -0.0590869
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0582773
PRKCA protein kinase C, alpha -0.0563483
PLA2G2A phospholipase A2, group IIA (platelets, synovial fluid) -0.0551787
EGLN3 egl-9 family hypoxia-inducible factor 3 -0.0532713
EPCAM epithelial cell adhesion molecule -0.051994
PARP4 poly (ADP-ribose) polymerase family, member 4 -0.0519094
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 -0.051685
NPSR1 neuropeptide S receptor 1 -0.0508689
JUN jun proto-oncogene -0.0506298
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.0497718
AHNAK AHNAK nucleoprotein -0.0480464
N4BP2L2 NEDD4 binding protein 2-like 2 -0.0476862
TSHZ2 teashirt zinc finger homeobox 2 -0.0475048
RPL23 ribosomal protein L23 -0.0471967
UBR2 ubiquitin protein ligase E3 component n-recognin 2 -0.0467574
HLA-E major histocompatibility complex, class I, E -0.0459206
HLA-C major histocompatibility complex, class I, C -0.0456375
RSAD2 radical S-adenosyl methionine domain containing 2 -0.045446
RRBP1 ribosome binding protein 1 -0.0446719
RUNX1 runt-related transcription factor 1 -0.0442638
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0442545
IFI27 interferon, alpha-inducible protein 27 -0.0437782
PATJ PATJ crumbs cell polarity complex component -0.0432217
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0431189
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 -0.043037
SSH2 slingshot protein phosphatase 2 -0.0407968
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0407814
ACTG1 actin gamma 1 -0.0405384
MUC20 mucin 20, cell surface associated -0.0402153
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0400549
AHI1 Abelson helper integration site 1 -0.0398611
NCKAP5 NCK-associated protein 5 -0.0397416
RPL34 ribosomal protein L34 -0.0395278
TRIO trio Rho guanine nucleotide exchange factor -0.0394589
ZBTB20 zinc finger and BTB domain containing 20 -0.0392246
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) -0.0380267
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0376318
BICRAL BICRA like chromatin remodeling complex associated protein -0.037621
PMP22 peripheral myelin protein 22 -0.0376031
NT5C3A 5'-nucleotidase, cytosolic IIIA -0.0372948
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) -0.0367507
LCN2 lipocalin 2 -0.0365938
MSI2 musashi RNA-binding protein 2 -0.0364731
NF1 neurofibromin 1 -0.0355023
ABLIM1 actin binding LIM protein 1 -0.0354475
TMSB10 thymosin beta 10 -0.0352905
RPL35A ribosomal protein L35a -0.0351602
PLSCR1 phospholipid scramblase 1 -0.0350666
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0349394
PHF3 PHD finger protein 3 -0.0344525
ATP11A ATPase, class VI, type 11A -0.0343678
TRERF1 transcriptional regulating factor 1 -0.0343071
PTK2 protein tyrosine kinase 2 -0.0338031
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0336149
RHOBTB3 Rho-related BTB domain containing 3 -0.0336026
PRRC2C proline-rich coiled-coil 2C -0.0333241
ACTN4 actinin, alpha 4 -0.0332395
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) -0.0331841
H1-0 H1.0 linker histone -0.0331744
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.032849
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0324932
EPHB2 EPH receptor B2 -0.032294
RPL7L1 ribosomal protein L7-like 1 -0.0322265
FTL ferritin, light polypeptide -0.0319349
CALR calreticulin -0.0315522
SQSTM1 sequestosome 1 -0.031142
NCOA7 nuclear receptor coactivator 7 -0.030863
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0304251
TM4SF1 transmembrane 4 L six family member 1 -0.0302479
WSB1 WD repeat and SOCS box containing 1 -0.030137
PDIA4 protein disulfide isomerase family A, member 4 -0.0299871
PDIA3 protein disulfide isomerase family A, member 3 -0.0298803