Bimatoprost_HepG2/C3A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bimatoprost perturbation in HepG2/C3A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bimatoprost_HepG2/C3A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 0.146359
FAM107B family with sequence similarity 107, member B 0.0658858
TRIO trio Rho guanine nucleotide exchange factor 0.0639564
SAMD4A sterile alpha motif domain containing 4A 0.0535753
EHBP1 EH domain binding protein 1 0.0535069
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0510213
DSPP dentin sialophosphoprotein 0.045415
PDLIM5 PDZ and LIM domain 5 0.0438258
PAWR PRKC, apoptosis, WT1, regulator 0.0407085
FOXP1 forkhead box P1 0.0404528
ATXN1 ataxin 1 0.0392355
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0339768
GK glycerol kinase 0.0331286
ASPH aspartate beta-hydroxylase 0.0330862
MACF1 microtubule-actin crosslinking factor 1 0.0308246
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.0305828
EXT1 exostosin glycosyltransferase 1 0.0294084
LPP LIM domain containing preferred translocation partner in lipoma 0.0290286
ITGAV integrin, alpha V 0.0287687
SMAD3 SMAD family member 3 0.0269252
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) 0.0267005
MBNL2 muscleblind-like splicing regulator 2 0.026227
SVIL supervillin 0.0255448
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0254891
ZNF644 zinc finger protein 644 0.0252859
FAT1 FAT atypical cadherin 1 0.0251386
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 0.025128
GAREM1 GRB2 associated regulator of MAPK1 subtype 1 0.0245714
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0245016
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0244948
GRB10 growth factor receptor-bound protein 10 0.0243536
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0241918
FRMD5 FERM domain containing 5 0.0240682
BCL2L1 BCL2-like 1 0.0237911
INTS6 integrator complex subunit 6 0.0234255
VCL vinculin 0.0234225
MYO1E myosin IE 0.0226355
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0225752
DOCK4 dedicator of cytokinesis 4 0.0224449
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0220391
TPM1 tropomyosin 1 (alpha) 0.0220037
DST dystonin 0.0218867
SORL1 sortilin-related receptor, L(DLR class) A repeats containing 0.0216322
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0212557
DNAH5 dynein, axonemal, heavy chain 5 0.0208051
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0208003
RASA2 RAS p21 protein activator 2 0.0207775
DNAH17 dynein, axonemal, heavy chain 17 0.0206441
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0205438
ERRFI1 ERBB receptor feedback inhibitor 1 0.0203453
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0201608
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0200236
GMDS GDP-mannose 4,6-dehydratase 0.0199294
ACSL3 acyl-CoA synthetase long-chain family member 3 0.0190812
ITCH itchy E3 ubiquitin protein ligase 0.0182422
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0182363
SLC20A2 solute carrier family 20 (phosphate transporter), member 2 0.0180094
AFF1 AF4/FMR2 family, member 1 0.0177459
SERTAD2 SERTA domain containing 2 0.0175857
LIMS1 LIM and senescent cell antigen-like domains 1 0.0175713
SMYD3 SET and MYND domain containing 3 0.0175046
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.017463
RSU1 Ras suppressor protein 1 0.017309
GPC6 glypican 6 0.017278
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0172706
PRKCA protein kinase C, alpha 0.0170981
RIGI RNA sensor RIG-I 0.0169523
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 0.016912
FERMT1 fermitin family member 1 0.0168577
LMO7 LIM domain 7 0.0167682
AKAP13 A kinase (PRKA) anchor protein 13 0.0166488
FMNL2 formin-like 2 0.0165817
RAD51B RAD51 paralog B 0.0162271
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0161729
CADM1 cell adhesion molecule 1 0.0159738
OSBPL10 oxysterol binding protein-like 10 0.0159059
ZBTB20 zinc finger and BTB domain containing 20 0.0157043
CP ceruloplasmin (ferroxidase) 0.0156019
DLC1 DLC1 Rho GTPase activating protein 0.0153233
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.015118
ABTB3 ankyrin repeat and BTB domain containing 3 0.0150353
NSUN6 NOP2/Sun domain family, member 6 0.015009
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0150089
HPCAL1 hippocalcin-like 1 0.0148039
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0146444
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 0.0146159
FARP1 FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) 0.0146004
ARHGAP21 Rho GTPase activating protein 21 0.0145261
JARID2 jumonji, AT rich interactive domain 2 0.0143018
DUSP16 dual specificity phosphatase 16 0.0142871
BZW1 basic leucine zipper and W2 domains 1 0.014269
ARHGAP9 Rho GTPase activating protein 9 0.014212
SPSB1 splA/ryanodine receptor domain and SOCS box containing 1 0.0141797
FKBP5 FK506 binding protein 5 0.0141613
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0141291
KYNU kynureninase 0.0139533
UBASH3B ubiquitin associated and SH3 domain containing B 0.013948
AOPEP aminopeptidase O (putative) 0.0137917
CANX calnexin 0.0136772
BCAR3 breast cancer anti-estrogen resistance 3 0.0135343

decreased expression

Symbol Name Standardized Value
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 -0.316946
IGF2 insulin-like growth factor 2 -0.179224
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.170019
C3 complement component 3 -0.104984
APOB apolipoprotein B -0.0617395
MT2A metallothionein 2A -0.0608205
FNDC3B fibronectin type III domain containing 3B -0.0433291
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0428767
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 -0.0367778
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0358712
ELL2 elongation factor, RNA polymerase II, 2 -0.0355369
RPS6 ribosomal protein S6 -0.0346508
EML4 echinoderm microtubule associated protein like 4 -0.0338533
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0332046
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0324697
TMSB10 thymosin beta 10 -0.031245
IGFBP1 insulin-like growth factor binding protein 1 -0.0297968
RPL23 ribosomal protein L23 -0.0272095
FTL ferritin, light polypeptide -0.0262059
VEGFA vascular endothelial growth factor A -0.0255444
SLC6A14 solute carrier family 6 (amino acid transporter), member 14 -0.0251949
ACSL4 acyl-CoA synthetase long-chain family member 4 -0.0238803
TMEM123 transmembrane protein 123 -0.0236721
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0233274
FN1 fibronectin 1 -0.0230441
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0226478
MAML2 mastermind-like 2 (Drosophila) -0.0223182
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0221557
CPE carboxypeptidase E -0.0220954
RPS19 ribosomal protein S19 -0.0219399
H1-0 H1.0 linker histone -0.0219113
ZNF292 zinc finger protein 292 -0.0218216
A2M alpha-2-macroglobulin -0.0217855
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0217126
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0216986
CFB complement factor B -0.0212099
LRRTM4 leucine rich repeat transmembrane neuronal 4 -0.020936
HMGA1 high mobility group AT-hook 1 -0.0207634
RPLP2 ribosomal protein, large, P2 -0.0204063
APOA2 apolipoprotein A-II -0.0202572
VPS54 vacuolar protein sorting 54 homolog (S. cerevisiae) -0.0202466
PDIA3 protein disulfide isomerase family A, member 3 -0.0202252
PEG3 paternally expressed 3 -0.019445
EGR1 early growth response 1 -0.0191338
PKM pyruvate kinase, muscle -0.0186903
DDIT4 DNA-damage-inducible transcript 4 -0.0186685
BHLHE40 basic helix-loop-helix family, member e40 -0.0185636
ID2 inhibitor of DNA binding 2, dominant negative helix-loop-helix protein -0.018543
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0181603
RPLP1 ribosomal protein, large, P1 -0.0177269
ITIH2 inter-alpha-trypsin inhibitor heavy chain 2 -0.0176709
DTNA dystrobrevin, alpha -0.0175696
RBM25 RNA binding motif protein 25 -0.0175154
CRLS1 cardiolipin synthase 1 -0.0174961
PTBP3 polypyrimidine tract binding protein 3 -0.0171736
RPL35A ribosomal protein L35a -0.0169916
PLIN2 perilipin 2 -0.0169672
NDRG1 N-myc downstream regulated 1 -0.0163831
LYZ lysozyme -0.0161208
GSE1 Gse1 coiled-coil protein -0.0159372
RPL26 ribosomal protein L26 -0.0159279
LRMDA leucine rich melanocyte differentiation associated -0.0159199
PFN1 profilin 1 -0.0158907
RPL11 ribosomal protein L11 -0.0158519
MAN1A1 mannosidase, alpha, class 1A, member 1 -0.0158243
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.015682
APOE apolipoprotein E -0.0155806
RBM39 RNA binding motif protein 39 -0.0155724
RPS12 ribosomal protein S12 -0.0154824
FTH1 ferritin, heavy polypeptide 1 -0.0154595
ICAM1 intercellular adhesion molecule 1 -0.0152313
TMEM51 transmembrane protein 51 -0.0152277
UBE2D2 ubiquitin-conjugating enzyme E2D 2 -0.0148032
CAMK2N1 calcium/calmodulin-dependent protein kinase II inhibitor 1 -0.0147061
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0146281
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0146201
UBXN4 UBX domain protein 4 -0.014565
CST3 cystatin C -0.0145247
CYB5R3 cytochrome b5 reductase 3 -0.014228
PHYHIPL phytanoyl-CoA 2-hydroxylase interacting protein-like -0.0142173
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 -0.0141437
KDM7A lysine (K)-specific demethylase 7A -0.014097
PCBP2 poly(rC) binding protein 2 -0.0139361
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0137662
S100A9 S100 calcium binding protein A9 -0.0137061
ATP1A4 ATPase, Na+/K+ transporting, alpha 4 polypeptide -0.0135998
TLK1 tousled-like kinase 1 -0.013581
EEF2 eukaryotic translation elongation factor 2 -0.0134158
APOH apolipoprotein H (beta-2-glycoprotein I) -0.0134148
RPS21 ribosomal protein S21 -0.0133902
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase -0.0133791
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0133234
FBF1 Fas (TNFRSF6) binding factor 1 -0.013287
RPL37A ribosomal protein L37a -0.0130075
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 -0.0127419
UGP2 UDP-glucose pyrophosphorylase 2 -0.0127286
ARID2 AT rich interactive domain 2 (ARID, RFX-like) -0.0127033
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.01266
ARL5B ADP-ribosylation factor-like 5B -0.0125672
RPS13 ribosomal protein S13 -0.0124274