Bimatoprost_LS 180 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bimatoprost perturbation in LS 180 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bimatoprost_LS 180 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MYO1E myosin IE 0.0555956
RPS12 ribosomal protein S12 0.0488329
LMO7 LIM domain 7 0.0402548
EXT1 exostosin glycosyltransferase 1 0.0341986
VCL vinculin 0.0277236
LGR4 leucine-rich repeat containing G protein-coupled receptor 4 0.0256965
VIM vimentin 0.0254113
ONECUT3 one cut homeobox 3 0.0244455
MT2A metallothionein 2A 0.0235588
ERRFI1 ERBB receptor feedback inhibitor 1 0.0227684
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0223571
MUC13 mucin 13, cell surface associated 0.0222676
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 0.0221107
FN1 fibronectin 1 0.0204985
MARCHF3 membrane associated ring-CH-type finger 3 0.0204577
TPT1 tumor protein, translationally-controlled 1 0.0203964
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0198953
AKAP12 A kinase (PRKA) anchor protein 12 0.0195725
TM4SF1 transmembrane 4 L six family member 1 0.0191767
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0186729
KLF5 Kruppel-like factor 5 (intestinal) 0.0185796
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0185303
PDLIM5 PDZ and LIM domain 5 0.0178945
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0170221
GPC6 glypican 6 0.016965
POF1B premature ovarian failure, 1B 0.0163317
LURAP1L leucine rich adaptor protein 1-like 0.0162331
ARHGAP42 Rho GTPase activating protein 42 0.0161746
B2M beta-2-microglobulin 0.0160547
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0160257
NCEH1 neutral cholesterol ester hydrolase 1 0.0151484
DST dystonin 0.0146249
MACF1 microtubule-actin crosslinking factor 1 0.01444
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.014219
PDE10A phosphodiesterase 10A 0.0139451
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0132185
RIGI RNA sensor RIG-I 0.0131163
NR4A1 nuclear receptor subfamily 4, group A, member 1 0.013091
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 0.0130298
TUFT1 tuftelin 1 0.0125933
CXCL8 chemokine (C-X-C motif) ligand 8 0.0124089
HSPA8 heat shock 70kDa protein 8 0.0122916
RND3 Rho family GTPase 3 0.0122656
CTNND1 catenin (cadherin-associated protein), delta 1 0.0122258
RPL14 ribosomal protein L14 0.0121091
PLAUR plasminogen activator, urokinase receptor 0.011669
CFAP44 cilia and flagella associated protein 44 0.0113464
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0113134
DUSP16 dual specificity phosphatase 16 0.0113107
WWOX WW domain containing oxidoreductase 0.0109032
LAMB3 laminin, beta 3 0.0108367
GADD45A growth arrest and DNA-damage-inducible, alpha 0.0108137
BASP1 brain abundant, membrane attached signal protein 1 0.0105781
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 0.0104737
SQSTM1 sequestosome 1 0.0104283
RPS7 ribosomal protein S7 0.0102707
AREG amphiregulin 0.0098982
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.0098826
PRKCSH protein kinase C substrate 80K-H 0.00981731
ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 0.00978518
HADHA hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit 0.00968233
SIDT1 SID1 transmembrane family, member 1 0.00966448
ANXA1 annexin A1 0.00962836
MYO6 myosin VI 0.00962738
KIF5C kinesin family member 5C 0.00953754
NAV2 neuron navigator 2 0.00927673
GAREM1 GRB2 associated regulator of MAPK1 subtype 1 0.00926253
PALM2AKAP2 PALM2 and AKAP2 fusion 0.00917793
NAP1L1 nucleosome assembly protein 1-like 1 0.00914959
IGFBP3 insulin-like growth factor binding protein 3 0.00910567
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 0.00907239
RDX radixin 0.00899126
OSMR oncostatin M receptor 0.008961
TMF1 TATA element modulatory factor 1 0.00887634
USP53 ubiquitin specific peptidase 53 0.00877029
TMC5 transmembrane channel-like 5 0.00876967
GLIS3 GLIS family zinc finger 3 0.00875704
RPS18 ribosomal protein S18 0.00874319
TNFSF15 tumor necrosis factor (ligand) superfamily, member 15 0.00873095
NABP1 nucleic acid binding protein 1 0.00869738
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.00868279
OASL 2'-5'-oligoadenylate synthetase-like 0.00867914
ATP5F1E ATP synthase F1 subunit epsilon 0.00860257
NLGN1 neuroligin 1 0.00858433
BBS9 Bardet-Biedl syndrome 9 0.00850819
B4GALNT3 beta-1,4-N-acetyl-galactosaminyl transferase 3 0.00849208
IGFBP5 insulin-like growth factor binding protein 5 0.00847945
SMYD3 SET and MYND domain containing 3 0.00839873
TRIB1 tribbles pseudokinase 1 0.00834554
INTS6 integrator complex subunit 6 0.00832141
PRR5L proline rich 5 like 0.00824435
COL6A3 collagen, type VI, alpha 3 0.00823787
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.00823776
CATSPERB catsper channel auxiliary subunit beta 0.00821458
MYOF myoferlin 0.00819984
OFD1 oral-facial-digital syndrome 1 0.00819716
RAI14 retinoic acid induced 14 0.00819205
CRY1 cryptochrome circadian clock 1 0.00816968
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.00813226
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0080877

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.346185
MUC6 mucin 6, oligomeric mucus/gel-forming -0.206623
NPSR1 neuropeptide S receptor 1 -0.180374
TMSB10 thymosin beta 10 -0.148024
MUC5AC mucin 5AC, oligomeric mucus/gel-forming -0.111351
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.10875
ITGA6 integrin, alpha 6 -0.0933705
PTMA prothymosin, alpha -0.089519
ANXA2 annexin A2 -0.087044
PKM pyruvate kinase, muscle -0.0850952
RPS6 ribosomal protein S6 -0.0843734
ACTN4 actinin, alpha 4 -0.0679761
KRT8 keratin 8, type II -0.0666241
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0659025
TNS4 tensin 4 -0.0658222
FLNB filamin B, beta -0.0657785
LDHA lactate dehydrogenase A -0.0656937
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0637177
POTEF POTE ankyrin domain family, member F -0.0622437
NALF1 NALCN channel auxiliary factor 1 -0.0617224
AHNAK AHNAK nucleoprotein -0.0614795
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0600555
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0590156
GREB1L growth regulation by estrogen in breast cancer-like -0.0579134
CALB1 calbindin 1, 28kDa -0.0561403
TXNIP thioredoxin interacting protein -0.0555515
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B -0.0541936
GPHN gephyrin -0.0536997
S100A6 S100 calcium binding protein A6 -0.0521173
PERP PERP, TP53 apoptosis effector -0.0509818
EEF2 eukaryotic translation elongation factor 2 -0.0505692
FTH1 ferritin, heavy polypeptide 1 -0.0498747
UBC ubiquitin C -0.0495337
RPL8 ribosomal protein L8 -0.0495089
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0482204
RREB1 ras responsive element binding protein 1 -0.0459612
KIF5B kinesin family member 5B -0.0454483
ACTG1 actin gamma 1 -0.0452647
KRT18 keratin 18, type I -0.0451069
BCAT1 branched chain amino-acid transaminase 1, cytosolic -0.0449246
EPCAM epithelial cell adhesion molecule -0.0442814
GOLGA4 golgin A4 -0.0435776
ALCAM activated leukocyte cell adhesion molecule -0.0428234
ANKRD11 ankyrin repeat domain 11 -0.0424801
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.042413
HMGA1 high mobility group AT-hook 1 -0.0423333
PNISR PNN-interacting serine/arginine-rich protein -0.0422895
ATP5F1B ATP synthase F1 subunit beta -0.0417645
NCOR1 nuclear receptor corepressor 1 -0.0414909
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0408661
CD46 CD46 molecule, complement regulatory protein -0.0403424
MUC17 mucin 17, cell surface associated -0.0401402
MUC5B mucin 5B, oligomeric mucus/gel-forming -0.0396198
PTEN phosphatase and tensin homolog -0.0393408
LMNA lamin A/C -0.0391161
TFF3 trefoil factor 3 (intestinal) -0.0383536
GMDS GDP-mannose 4,6-dehydratase -0.0382216
SETD5 SET domain containing 5 -0.0371779
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0368203
PIGR polymeric immunoglobulin receptor -0.0367596
ANTXR2 anthrax toxin receptor 2 -0.0363591
RPS23 ribosomal protein S23 -0.0363142
NFIA nuclear factor I/A -0.0361963
RPL23 ribosomal protein L23 -0.0352175
ENO1 enolase 1, (alpha) -0.0348168
FERMT1 fermitin family member 1 -0.0343652
YBX1 Y box binding protein 1 -0.0341655
ITGB4 integrin, beta 4 -0.0341492
GCC2 GRIP and coiled-coil domain containing 2 -0.0340835
DLG1 discs, large homolog 1 (Drosophila) -0.0340317
ESYT2 extended synaptotagmin-like protein 2 -0.0339256
DEK DEK proto-oncogene -0.0331427
TPM4 tropomyosin 4 -0.032883
PTBP3 polypyrimidine tract binding protein 3 -0.0328369
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0325838
CCND1 cyclin D1 -0.0325587
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0322537
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0321863
IQGAP1 IQ motif containing GTPase activating protein 1 -0.0320933
PRSS3 protease, serine, 3 -0.0318362
PPP2R5C protein phosphatase 2, regulatory subunit B', gamma -0.0313168
FOSL1 FOS-like antigen 1 -0.0311111
FAM13A family with sequence similarity 13, member A -0.0310782
RPS5 ribosomal protein S5 -0.0310738
RPL32 ribosomal protein L32 -0.0310477
RNF43 ring finger protein 43 -0.0309963
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0305629
SBF2 SET binding factor 2 -0.0303309
S100A10 S100 calcium binding protein A10 -0.0303058
RPL35A ribosomal protein L35a -0.0302353
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) -0.0299912
MAML2 mastermind-like 2 (Drosophila) -0.0298335
BCKDHB branched chain keto acid dehydrogenase E1, beta polypeptide -0.0298245
PFN1 profilin 1 -0.029818
PCBP2 poly(rC) binding protein 2 -0.0297897
RPS8 ribosomal protein S8 -0.0297523
TRIM2 tripartite motif containing 2 -0.0293756
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.0293324
ARHGAP12 Rho GTPase activating protein 12 -0.0292936
ANKRD17 ankyrin repeat domain 17 -0.0289771