Bimatoprost_MIA PaCa-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bimatoprost perturbation in MIA PaCa-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bimatoprost_MIA PaCa-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
CAPRIN2 caprin family member 2 0.0750126
PSD3 pleckstrin and Sec7 domain containing 3 0.0735202
PLEKHA4 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4 0.0663752
MT2A metallothionein 2A 0.060532
RPS12 ribosomal protein S12 0.0601535
ENO1 enolase 1, (alpha) 0.058726
PRELID2 PRELI domain containing 2 0.0571852
ANGPTL4 angiopoietin-like 4 0.0563843
DST dystonin 0.0518949
PDE10A phosphodiesterase 10A 0.0503857
CADM2 cell adhesion molecule 2 0.0499893
SDK1 sidekick cell adhesion molecule 1 0.0471541
SLK STE20-like kinase 0.0426451
TMSB4X thymosin beta 4, X-linked 0.0422845
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0418306
B2M beta-2-microglobulin 0.0415035
BIRC3 baculoviral IAP repeat containing 3 0.0406336
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0403802
KMT2E lysine (K)-specific methyltransferase 2E 0.0383217
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0366272
RPL37A ribosomal protein L37a 0.0347988
MSN moesin 0.0324943
ASPH aspartate beta-hydroxylase 0.0319004
VCL vinculin 0.0310695
PTP4A2 protein tyrosine phosphatase type IVA, member 2 0.0310495
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.030772
RPL37 ribosomal protein L37 0.0307191
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.030608
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0297718
AKAP12 A kinase (PRKA) anchor protein 12 0.0296654
RPS27A ribosomal protein S27a 0.028089
PYGL phosphorylase, glycogen, liver 0.0274303
HLA-B major histocompatibility complex, class I, B 0.0267016
RTTN rotatin 0.0260963
PMEPA1 prostate transmembrane protein, androgen induced 1 0.026022
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0255721
PABPN1 poly(A) binding protein, nuclear 1 0.0254131
SET SET nuclear proto-oncogene 0.0253913
PRKCE protein kinase C, epsilon 0.0253186
F2R coagulation factor II (thrombin) receptor 0.0247624
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0245767
RPL26 ribosomal protein L26 0.024001
CUX1 cut-like homeobox 1 0.0231897
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0230502
AMPD3 adenosine monophosphate deaminase 3 0.0229368
SOD2 superoxide dismutase 2, mitochondrial 0.0229188
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 0.0228803
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0223786
AKAP13 A kinase (PRKA) anchor protein 13 0.0221593
ERRFI1 ERBB receptor feedback inhibitor 1 0.0218806
TPRG1 tumor protein p63 regulated 1 0.0217991
RPS6 ribosomal protein S6 0.0213277
RPS18 ribosomal protein S18 0.0209792
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0206869
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.020624
DNER delta/notch-like EGF repeat containing 0.0204659
AREG amphiregulin 0.0201416
PTMA prothymosin, alpha 0.0200223
TPM3 tropomyosin 3 0.0198903
EIF5 eukaryotic translation initiation factor 5 0.0198372
ZBTB20 zinc finger and BTB domain containing 20 0.0198257
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0197354
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0196697
BZW1 basic leucine zipper and W2 domains 1 0.0195005
RPL36A ribosomal protein L36a 0.0194207
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0194095
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0192356
ANKRD36 ankyrin repeat domain 36 0.0191816
VMP1 vacuole membrane protein 1 0.0189523
PDE4D phosphodiesterase 4D, cAMP-specific 0.0189147
AKAP9 A kinase (PRKA) anchor protein 9 0.0186831
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0185879
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 0.0185876
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0183144
TSC22D1 TSC22 domain family, member 1 0.018292
DSTN destrin (actin depolymerizing factor) 0.0182737
FUT11 fucosyltransferase 11 (alpha (1,3) fucosyltransferase) 0.0181083
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0175814
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0171102
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0170953
CEP290 centrosomal protein 290kDa 0.0170386
SRSF5 serine/arginine-rich splicing factor 5 0.0170072
RBM25 RNA binding motif protein 25 0.0169058
GRAMD1B GRAM domain containing 1B 0.0168845
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0167382
RABGAP1L RAB GTPase activating protein 1-like 0.0167092
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 0.0165235
RPL27 ribosomal protein L27 0.0164396
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0164256
MYO9A myosin IXA 0.0163441
NDRG1 N-myc downstream regulated 1 0.0162921
RFFL ring finger and FYVE-like domain containing E3 ubiquitin protein ligase 0.0161472
RPS17 ribosomal protein S17 0.016068
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0159967
SMYD3 SET and MYND domain containing 3 0.0159961
RAD51B RAD51 paralog B 0.0159765
DPYD dihydropyrimidine dehydrogenase 0.0157741
FMNL2 formin-like 2 0.0155608
RPS3 ribosomal protein S3 0.0152028
ZDHHC14 zinc finger, DHHC-type containing 14 0.0151589

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.477853
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.121191
TXNRD1 thioredoxin reductase 1 -0.113445
VIM vimentin -0.107671
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0987944
DLG1 discs, large homolog 1 (Drosophila) -0.0972343
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0918987
TMSB10 thymosin beta 10 -0.0855622
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0834083
CD44 CD44 molecule (Indian blood group) -0.0818212
AHNAK AHNAK nucleoprotein -0.0810088
SLC38A2 solute carrier family 38, member 2 -0.0771797
ACTG1 actin gamma 1 -0.0742654
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0647059
POTEF POTE ankyrin domain family, member F -0.0620579
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 -0.0587993
EEF2 eukaryotic translation elongation factor 2 -0.0571972
EGR1 early growth response 1 -0.0555108
HDLBP high density lipoprotein binding protein -0.0535487
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0516989
FTL ferritin, light polypeptide -0.0498198
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0431874
USP34 ubiquitin specific peptidase 34 -0.042269
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.042205
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0418338
FTH1 ferritin, heavy polypeptide 1 -0.0414186
TMEM123 transmembrane protein 123 -0.0398868
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0381999
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0372925
LMAN1 lectin, mannose-binding, 1 -0.0368059
PTPRF protein tyrosine phosphatase, receptor type, F -0.0366115
RGS4 regulator of G-protein signaling 4 -0.0343057
APP amyloid beta (A4) precursor protein -0.0339832
SPAG9 sperm associated antigen 9 -0.0338016
VDAC1 voltage-dependent anion channel 1 -0.0331786
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0331492
LOC112694756 uncharaterized LOC112694756 -0.0330064
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0327749
EHBP1 EH domain binding protein 1 -0.0325069
TOP1 topoisomerase (DNA) I -0.0325036
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0324685
RAI1 retinoic acid induced 1 -0.0321616
MKI67 marker of proliferation Ki-67 -0.0320022
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0319585
GSK3B glycogen synthase kinase 3 beta -0.031717
ZBTB38 zinc finger and BTB domain containing 38 -0.0315381
GARS1 glycyl-tRNA synthetase 1 -0.0304686
SERPINB9 serpin peptidase inhibitor, clade B (ovalbumin), member 9 -0.0298425
CANX calnexin -0.0297626
ANKRD28 ankyrin repeat domain 28 -0.029309
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0289214
BIRC6 baculoviral IAP repeat containing 6 -0.0287532
IARS1 isoleucyl-tRNA synthetase 1 -0.0282608
ZNF217 zinc finger protein 217 -0.0281766
LOXL2 lysyl oxidase-like 2 -0.0280085
HPCAL1 hippocalcin-like 1 -0.0278779
FBXO11 F-box protein 11 -0.027611
CMIP c-Maf inducing protein -0.0275987
ACTR2 ARP2 actin-related protein 2 homolog (yeast) -0.0273017
RUNX1 runt-related transcription factor 1 -0.0271866
ZMYND8 zinc finger, MYND-type containing 8 -0.0267858
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0266156
RAB7A RAB7A, member RAS oncogene family -0.0262194
NCEH1 neutral cholesterol ester hydrolase 1 -0.0261752
MYC v-myc avian myelocytomatosis viral oncogene homolog -0.0259976
TAOK1 TAO kinase 1 -0.0257783
YBX1 Y box binding protein 1 -0.0256674
SRGN serglycin -0.0256504
ADGRG6 adhesion G protein-coupled receptor G6 -0.025575
EPHA4 EPH receptor A4 -0.0252227
RASAL2 RAS protein activator like 2 -0.025124
KMT2C lysine (K)-specific methyltransferase 2C -0.0249715
DNTTIP2 deoxynucleotidyltransferase, terminal, interacting protein 2 -0.0249451
RPL8 ribosomal protein L8 -0.0244759
KDM3A lysine (K)-specific demethylase 3A -0.0243863
LDHA lactate dehydrogenase A -0.0242321
ANKRD11 ankyrin repeat domain 11 -0.0231103
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0228468
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.0224808
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0223038
FLNB filamin B, beta -0.0218776
TRIO trio Rho guanine nucleotide exchange factor -0.0216855
RAB27B RAB27B, member RAS oncogene family -0.0216405
NAV2 neuron navigator 2 -0.0213359
ANKRD50 ankyrin repeat domain 50 -0.0213265
SBF2 SET binding factor 2 -0.02131
CENPF centromere protein F, 350/400kDa -0.0212179
ZMYM2 zinc finger, MYM-type 2 -0.0211787
ECT2 epithelial cell transforming 2 -0.0211732
ANKRD17 ankyrin repeat domain 17 -0.0208291
ZFAND3 zinc finger, AN1-type domain 3 -0.0206628
AFAP1 actin filament associated protein 1 -0.0206426
RPS8 ribosomal protein S8 -0.0204591
ARHGAP29 Rho GTPase activating protein 29 -0.0204557
CAPN2 calpain 2, (m/II) large subunit -0.0204418
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0203997
SPRED2 sprouty-related, EVH1 domain containing 2 -0.0202872
ANLN anillin, actin binding protein -0.0201429
STK17A serine/threonine kinase 17a -0.0201151
CAP1 CAP, adenylate cyclase-associated protein 1 (yeast) -0.0199757