Bimatoprost_NCI-H2030 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bimatoprost perturbation in NCI-H2030 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bimatoprost_NCI-H2030 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PM20D1 peptidase M20 domain containing 1 0.109933
MT2A metallothionein 2A 0.0973334
PDE4D phosphodiesterase 4D, cAMP-specific 0.0959128
SAMD4A sterile alpha motif domain containing 4A 0.0665258
AKAP12 A kinase (PRKA) anchor protein 12 0.0659242
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0638769
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0608711
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0595093
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0578168
SMOC1 SPARC related modular calcium binding 1 0.0564958
TRIO trio Rho guanine nucleotide exchange factor 0.0553195
ZFAND3 zinc finger, AN1-type domain 3 0.0523506
WAC WW domain containing adaptor with coiled-coil 0.051599
EIF1 eukaryotic translation initiation factor 1 0.0498556
RBM39 RNA binding motif protein 39 0.049173
ELL2 elongation factor, RNA polymerase II, 2 0.0489859
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0475933
ZSWIM6 zinc finger, SWIM-type containing 6 0.0466288
RPLP1 ribosomal protein, large, P1 0.045823
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.044354
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.0441283
PTPRM protein tyrosine phosphatase, receptor type, M 0.0401391
GOLGA4 golgin A4 0.0400502
COPA coatomer protein complex, subunit alpha 0.0386113
FNDC3B fibronectin type III domain containing 3B 0.0365832
FMNL2 formin-like 2 0.0362747
LPP LIM domain containing preferred translocation partner in lipoma 0.0357428
AKAP13 A kinase (PRKA) anchor protein 13 0.0348895
PDE10A phosphodiesterase 10A 0.034343
EXT1 exostosin glycosyltransferase 1 0.0336064
ATXN1 ataxin 1 0.033107
TTC3 tetratricopeptide repeat domain 3 0.0328288
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0312687
UTRN utrophin 0.0309777
ZNF638 zinc finger protein 638 0.0307442
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0302889
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0301246
ATF6 activating transcription factor 6 0.0295782
ARHGAP26 Rho GTPase activating protein 26 0.0292529
RPL7 ribosomal protein L7 0.0291669
CTBP2 C-terminal binding protein 2 0.0291053
MYO1E myosin IE 0.0290199
EXOC6B exocyst complex component 6B 0.0289989
PUM2 pumilio RNA-binding family member 2 0.0286879
RPL36 ribosomal protein L36 0.0285829
PRELID2 PRELI domain containing 2 0.0282711
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0281997
SOD2 superoxide dismutase 2, mitochondrial 0.0280254
RPL35A ribosomal protein L35a 0.0279825
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0278183
RAD51B RAD51 paralog B 0.0276807
ITCH itchy E3 ubiquitin protein ligase 0.0274567
PTPRJ protein tyrosine phosphatase, receptor type, J 0.0274103
HELZ helicase with zinc finger 0.0273965
INTS6 integrator complex subunit 6 0.0272696
KMT2C lysine (K)-specific methyltransferase 2C 0.026993
PRKD1 protein kinase D1 0.0269229
TPT1 tumor protein, translationally-controlled 1 0.0268915
NPAS2 neuronal PAS domain protein 2 0.0268452
KTN1 kinectin 1 (kinesin receptor) 0.0266232
MED13 mediator complex subunit 13 0.0266075
EPAS1 endothelial PAS domain protein 1 0.0263874
TERF2IP telomeric repeat binding factor 2, interacting protein 0.0263475
RPS6 ribosomal protein S6 0.0262743
RICTOR RPTOR independent companion of MTOR, complex 2 0.0261128
FUS FUS RNA binding protein 0.0260707
GOLGB1 golgin B1 0.0254981
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0254807
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0254647
SMAD2 SMAD family member 2 0.0253199
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0250949
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0248433
TOP1 topoisomerase (DNA) I 0.0245181
KDM3A lysine (K)-specific demethylase 3A 0.0243123
DSCAM Down syndrome cell adhesion molecule 0.0241253
GCLC glutamate-cysteine ligase, catalytic subunit 0.0240592
RPS29 ribosomal protein S29 0.0240176
FGD4 FYVE, RhoGEF and PH domain containing 4 0.0239922
PDLIM5 PDZ and LIM domain 5 0.023975
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.023926
DCAF6 DDB1 and CUL4 associated factor 6 0.023838
SPRED2 sprouty-related, EVH1 domain containing 2 0.0236953
RPL31 ribosomal protein L31 0.0236481
TBC1D22A TBC1 domain family, member 22A 0.0232276
TPR translocated promoter region, nuclear basket protein 0.0229767
CDK13 cyclin-dependent kinase 13 0.0226524
ARFGEF1 ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited) 0.0226103
PSEN1 presenilin 1 0.0226044
CNOT1 CCR4-NOT transcription complex, subunit 1 0.0224461
SPIRE1 spire-type actin nucleation factor 1 0.0224329
RPS19 ribosomal protein S19 0.0223511
BASP1 brain abundant, membrane attached signal protein 1 0.0223389
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0223339
MACF1 microtubule-actin crosslinking factor 1 0.022313
PMEPA1 prostate transmembrane protein, androgen induced 1 0.0223106
VRK2 vaccinia related kinase 2 0.0221459
NUMB numb homolog (Drosophila) 0.0220423
MSN moesin 0.0220402
FTL ferritin, light polypeptide 0.0219754
BAIAP2L1 BAI1-associated protein 2-like 1 0.0219738

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.216563
TXNRD1 thioredoxin reductase 1 -0.183079
GRAMD1B GRAM domain containing 1B -0.176954
VIM vimentin -0.160728
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.133455
FGB fibrinogen beta chain -0.105917
IGF2 insulin-like growth factor 2 -0.101466
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.094468
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0772685
PKM pyruvate kinase, muscle -0.0746621
NQO1 NAD(P)H dehydrogenase, quinone 1 -0.0746222
TMSB10 thymosin beta 10 -0.0695882
TM4SF1 transmembrane 4 L six family member 1 -0.0680321
S100A6 S100 calcium binding protein A6 -0.0667528
TFPI2 tissue factor pathway inhibitor 2 -0.0622549
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0611613
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0606611
UBC ubiquitin C -0.0581619
TPM3 tropomyosin 3 -0.057505
RPS27A ribosomal protein S27a -0.0482615
IGFBP4 insulin-like growth factor binding protein 4 -0.0470333
EEF2 eukaryotic translation elongation factor 2 -0.0461453
HDAC9 histone deacetylase 9 -0.0442555
EGR1 early growth response 1 -0.0439727
LANCL1 LanC lantibiotic synthetase component C-like 1 (bacterial) -0.0433163
OSMR oncostatin M receptor -0.0431995
BICC1 BicC family RNA binding protein 1 -0.0430882
TAGLN2 transgelin 2 -0.0429865
RTN4 reticulon 4 -0.0426884
POTEF POTE ankyrin domain family, member F -0.0425099
TPM4 tropomyosin 4 -0.0418751
ENO1 enolase 1, (alpha) -0.0416666
MKI67 marker of proliferation Ki-67 -0.0415424
NCEH1 neutral cholesterol ester hydrolase 1 -0.0388078
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0387724
PDIA6 protein disulfide isomerase family A, member 6 -0.038441
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0380415
XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) -0.037736
SVIL supervillin -0.0371065
AHNAK AHNAK nucleoprotein -0.0367903
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0367776
STC1 stanniocalcin 1 -0.0339372
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.033913
SRGN serglycin -0.0338966
ARL5B ADP-ribosylation factor-like 5B -0.0337855
ASPH aspartate beta-hydroxylase -0.0337688
LAMB1 laminin, beta 1 -0.0337355
ATP5F1B ATP synthase F1 subunit beta -0.0335793
EDIL3 EGF-like repeats and discoidin I-like domains 3 -0.0334784
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0330091
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0329479
DGKD diacylglycerol kinase, delta 130kDa -0.0323476
ACTR2 ARP2 actin-related protein 2 homolog (yeast) -0.0317944
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 -0.0317154
C15ORF48 chromosome 15 open reading frame 48 -0.0313218
NTN4 netrin 4 -0.0313138
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 -0.0312813
RHOA ras homolog family member A -0.031117
YBX1 Y box binding protein 1 -0.030624
LDHA lactate dehydrogenase A -0.0303529
LDHB lactate dehydrogenase B -0.0302982
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.0299635
HDGF hepatoma-derived growth factor -0.0295619
AK1 adenylate kinase 1 -0.0293846
THBS1 thrombospondin 1 -0.0291754
CENPF centromere protein F, 350/400kDa -0.0288129
MAP3K20 mitogen-activated protein kinase kinase kinase 20 -0.0286526
PFN1 profilin 1 -0.0279353
NAV3 neuron navigator 3 -0.0278919
PTP4A1 protein tyrosine phosphatase type IVA, member 1 -0.0276754
MCL1 myeloid cell leukemia 1 -0.0275519
ANXA2 annexin A2 -0.0274568
ANKRD28 ankyrin repeat domain 28 -0.0271352
BIRC3 baculoviral IAP repeat containing 3 -0.0270554
HMGA1 high mobility group AT-hook 1 -0.0269718
ACTG1 actin gamma 1 -0.0269435
NEGR1 neuronal growth regulator 1 -0.0269361
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0264578
FTH1 ferritin, heavy polypeptide 1 -0.0263939
SLC38A2 solute carrier family 38, member 2 -0.0262494
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0261699
TUBB tubulin, beta class I -0.025921
EEF1G eukaryotic translation elongation factor 1 gamma -0.0257803
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0256462
BABAM2 BRISC and BRCA1 A complex member 2 -0.0254468
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like -0.0253182
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.024171
FAM168A family with sequence similarity 168, member A -0.0237685
AHR aryl hydrocarbon receptor -0.0236886
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0233564
KIFC3 kinesin family member C3 -0.0233554
RAI1 retinoic acid induced 1 -0.0232748
MAP1B microtubule-associated protein 1B -0.0231503
NPC1 Niemann-Pick disease, type C1 -0.0230171
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.022521
USP3 ubiquitin specific peptidase 3 -0.0222139
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0220318
TUBA1B tubulin, alpha 1b -0.0217821
ANLN anillin, actin binding protein -0.0216988
NAMPT nicotinamide phosphoribosyltransferase -0.0216822