Bimatoprost_NCI-H2122 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bimatoprost perturbation in NCI-H2122 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bimatoprost_NCI-H2122 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
LMO7 LIM domain 7 0.161451
EGFR epidermal growth factor receptor 0.160512
GRAMD1B GRAM domain containing 1B 0.096989
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.087722
GOLGA4 golgin A4 0.0829687
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0769214
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0687516
COL6A3 collagen, type VI, alpha 3 0.0682843
PRKG1 protein kinase, cGMP-dependent, type I 0.0682233
KYNU kynureninase 0.0672848
TENM3 teneurin transmembrane protein 3 0.0644424
THSD4 thrombospondin, type I, domain containing 4 0.0644361
HMGA2 high mobility group AT-hook 2 0.0636298
SMAD3 SMAD family member 3 0.0634096
PTK2 protein tyrosine kinase 2 0.0619979
LIMCH1 LIM and calponin homology domains 1 0.059866
TJP1 tight junction protein 1 0.0576837
ASPH aspartate beta-hydroxylase 0.0568782
CTBP2 C-terminal binding protein 2 0.0551137
CLTC clathrin, heavy chain (Hc) 0.055033
NPAS2 neuronal PAS domain protein 2 0.0548638
CTNND1 catenin (cadherin-associated protein), delta 1 0.054648
MYO1E myosin IE 0.0536355
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0536046
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.0502559
CCSER1 coiled-coil serine-rich protein 1 0.0495495
ITGA6 integrin, alpha 6 0.0492671
MYO10 myosin X 0.0491677
DOCK5 dedicator of cytokinesis 5 0.0488792
INTS6 integrator complex subunit 6 0.0487092
PRELID2 PRELI domain containing 2 0.0485818
AREG amphiregulin 0.0484184
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0476572
CADM1 cell adhesion molecule 1 0.047619
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0474546
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0470418
ZSWIM6 zinc finger, SWIM-type containing 6 0.0468763
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0467766
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0460317
MED13L mediator complex subunit 13-like 0.0459616
TTC3 tetratricopeptide repeat domain 3 0.0458771
MED13 mediator complex subunit 13 0.0456956
FAT1 FAT atypical cadherin 1 0.0450286
GSK3B glycogen synthase kinase 3 beta 0.0450227
BAZ1A bromodomain adjacent to zinc finger domain, 1A 0.0441568
MT2A metallothionein 2A 0.043937
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0435848
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0432742
INHBA inhibin, beta A 0.0424499
PSD3 pleckstrin and Sec7 domain containing 3 0.0419815
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 0.0413911
WDFY2 WD repeat and FYVE domain containing 2 0.0408084
MACF1 microtubule-actin crosslinking factor 1 0.0406875
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) 0.0401213
RPS4X ribosomal protein S4, X-linked 0.0400359
YTHDC1 YTH domain containing 1 0.0397818
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0396001
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0385097
TMSB4X thymosin beta 4, X-linked 0.0384741
NKD1 naked cuticle homolog 1 (Drosophila) 0.0383082
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0380055
BZW1 basic leucine zipper and W2 domains 1 0.037916
EIF4A2 eukaryotic translation initiation factor 4A2 0.0375092
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0369831
SEC31A SEC31 homolog A (S. cerevisiae) 0.036874
GPHN gephyrin 0.0356274
TPR translocated promoter region, nuclear basket protein 0.0353113
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0351749
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0351301
TMF1 TATA element modulatory factor 1 0.0348546
FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 0.0340624
FNDC3B fibronectin type III domain containing 3B 0.034016
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0337079
MAP7 microtubule-associated protein 7 0.0336065
UBR1 ubiquitin protein ligase E3 component n-recognin 1 0.0335059
TRIM2 tripartite motif containing 2 0.0334715
NCEH1 neutral cholesterol ester hydrolase 1 0.0331258
ZNF644 zinc finger protein 644 0.0330204
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.032856
MBNL2 muscleblind-like splicing regulator 2 0.0328037
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0322178
CHD1 chromodomain helicase DNA binding protein 1 0.0321425
MATR3 matrin 3 0.0319823
EFNA5 ephrin-A5 0.0312845
FHIT fragile histidine triad 0.0310771
RPS12 ribosomal protein S12 0.0310704
TNKS2 tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2 0.0310521
GMDS GDP-mannose 4,6-dehydratase 0.0308498
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0305432
CAPZB capping protein (actin filament) muscle Z-line, beta 0.0304751
NAMPT nicotinamide phosphoribosyltransferase 0.0304069
MYH9 myosin, heavy chain 9, non-muscle 0.0302286
PDE8A phosphodiesterase 8A 0.0297731
ATP2C1 ATPase, Ca++ transporting, type 2C, member 1 0.0294855
VCL vinculin 0.0294013
LRP1B low density lipoprotein receptor-related protein 1B 0.0290186
USP9X ubiquitin specific peptidase 9, X-linked 0.0288883
MYOF myoferlin 0.0288627
MARK3 MAP/microtubule affinity-regulating kinase 3 0.0287715
DENND5A DENN/MADD domain containing 5A 0.0287539

decreased expression

Symbol Name Standardized Value
ATOSA atos homolog A -0.15864
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 -0.122213
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.117918
IGFBP3 insulin-like growth factor binding protein 3 -0.112573
IGF2 insulin-like growth factor 2 -0.112211
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.109402
PDE4D phosphodiesterase 4D, cAMP-specific -0.107261
FTH1 ferritin, heavy polypeptide 1 -0.0851276
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 -0.0849767
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type -0.0772143
S100A9 S100 calcium binding protein A9 -0.0722848
FN1 fibronectin 1 -0.0693152
FTL ferritin, light polypeptide -0.0691481
MTUS1 microtubule associated tumor suppressor 1 -0.0686471
BTG1 B-cell translocation gene 1, anti-proliferative -0.0681107
SLC24A3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 -0.0676197
MXD1 MAX dimerization protein 1 -0.0667378
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0628306
RAB11FIP1 RAB11 family interacting protein 1 (class I) -0.0620178
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0566531
STC1 stanniocalcin 1 -0.0541638
AKAP13 A kinase (PRKA) anchor protein 13 -0.0533201
MAST4 microtubule associated serine/threonine kinase family member 4 -0.0520819
ZMYND8 zinc finger, MYND-type containing 8 -0.0520349
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0517407
MCTP2 multiple C2 domains, transmembrane 2 -0.0506535
SBF2 SET binding factor 2 -0.0505655
B2M beta-2-microglobulin -0.0504175
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) -0.0488964
FOXO3 forkhead box O3 -0.0482739
SVIL supervillin -0.048234
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0475587
TAOK3 TAO kinase 3 -0.0474342
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0465218
ETS2 v-ets avian erythroblastosis virus E26 oncogene homolog 2 -0.0460665
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0459968
UBE2H ubiquitin-conjugating enzyme E2H -0.0455867
PTPRM protein tyrosine phosphatase, receptor type, M -0.0451862
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.0437202
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0431205
CBFA2T2 core-binding factor, runt domain, alpha subunit 2; translocated to, 2 -0.0417773
RPL23 ribosomal protein L23 -0.0416013
HLA-B major histocompatibility complex, class I, B -0.0413228
RREB1 ras responsive element binding protein 1 -0.0411007
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 -0.0410515
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 -0.0410385
ANXA2 annexin A2 -0.0393138
ATP11B ATPase, class VI, type 11B -0.0391241
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0391149
FAM107B family with sequence similarity 107, member B -0.0388379
LAMB3 laminin, beta 3 -0.0387626
WDR26 WD repeat domain 26 -0.0385462
ITCH itchy E3 ubiquitin protein ligase -0.0385142
HELZ helicase with zinc finger -0.0383713
MAP3K20 mitogen-activated protein kinase kinase kinase 20 -0.0382139
GPC6 glypican 6 -0.0377747
TXNRD1 thioredoxin reductase 1 -0.0374198
H3-3B H3.3 histone B -0.0373656
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0372474
SOS2 son of sevenless homolog 2 (Drosophila) -0.037083
BHLHE40 basic helix-loop-helix family, member e40 -0.0370108
UBXN4 UBX domain protein 4 -0.0369591
CSTB cystatin B (stefin B) -0.0366132
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0365161
DAAM1 dishevelled associated activator of morphogenesis 1 -0.0364315
ZNF207 zinc finger protein 207 -0.0363652
FMN1 formin 1 -0.0363132
S100A8 S100 calcium binding protein A8 -0.036073
TMEM123 transmembrane protein 123 -0.0360657
GPBP1 GC-rich promoter binding protein 1 -0.0358575
RPL31 ribosomal protein L31 -0.0356456
WASF2 WAS protein family, member 2 -0.0353152
ESYT2 extended synaptotagmin-like protein 2 -0.0351293
MON2 MON2 homolog (S. cerevisiae) -0.0350599
BBX bobby sox homolog (Drosophila) -0.0350124
FDPS farnesyl diphosphate synthase -0.0344724
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0343963
BAZ2A bromodomain adjacent to zinc finger domain, 2A -0.0340779
RIOK3 RIO kinase 3 -0.0338193
KLF6 Kruppel-like factor 6 -0.0337254
RSAD2 radical S-adenosyl methionine domain containing 2 -0.0334409
HLA-A major histocompatibility complex, class I, A -0.0334103
SOX4 SRY (sex determining region Y)-box 4 -0.0332846
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 -0.0330615
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0328428
SRPK2 SRSF protein kinase 2 -0.0327597
SREBF2 sterol regulatory element binding transcription factor 2 -0.0324848
ABCG1 ATP-binding cassette, sub-family G (WHITE), member 1 -0.0318053
PTBP3 polypyrimidine tract binding protein 3 -0.0316514
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0315996
CLDN4 claudin 4 -0.0315009
AGFG1 ArfGAP with FG repeats 1 -0.0314823
RUNX1 runt-related transcription factor 1 -0.0312105
ABHD17C abhydrolase domain containing 17C -0.0311466
PLAU plasminogen activator, urokinase -0.0308128
UBAP1 ubiquitin associated protein 1 -0.0306594
VIM vimentin -0.0301785
RB1CC1 RB1-inducible coiled-coil 1 -0.0301501
S100P S100 calcium binding protein P -0.0300552
ZNF217 zinc finger protein 217 -0.0299221