Bimatoprost_NCI-H23 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bimatoprost perturbation in NCI-H23 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bimatoprost_NCI-H23 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 0.180324
MCL1 myeloid cell leukemia 1 0.124135
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0932884
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.0782443
ELL2 elongation factor, RNA polymerase II, 2 0.0606188
MYH9 myosin, heavy chain 9, non-muscle 0.0589762
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0580153
ERRFI1 ERBB receptor feedback inhibitor 1 0.0553932
ZSWIM6 zinc finger, SWIM-type containing 6 0.0532465
INTS6 integrator complex subunit 6 0.0526322
PDLIM5 PDZ and LIM domain 5 0.0523542
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0495571
HOMER1 homer scaffolding protein 1 0.0476378
DST dystonin 0.0474002
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0452274
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0448417
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0423016
AEBP2 AE binding protein 2 0.0400709
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 0.0398347
YBX3 Y box binding protein 3 0.0395934
VCL vinculin 0.0374493
MSN moesin 0.0366739
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0365738
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0345574
PRELID2 PRELI domain containing 2 0.0345124
YAP1 Yes-associated protein 1 0.0339711
DSPP dentin sialophosphoprotein 0.0320722
C6ORF62 chromosome 6 open reading frame 62 0.0315209
SNAP25 synaptosomal-associated protein, 25kDa 0.0312278
FNDC3B fibronectin type III domain containing 3B 0.0306783
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide 0.0304711
SET SET nuclear proto-oncogene 0.0301479
KTN1 kinectin 1 (kinesin receptor) 0.0297122
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 0.0297077
SFPQ splicing factor proline/glutamine-rich 0.0295925
NR4A3 nuclear receptor subfamily 4, group A, member 3 0.029211
POTEF POTE ankyrin domain family, member F 0.0289186
RIMS2 regulating synaptic membrane exocytosis 2 0.0284401
MACF1 microtubule-actin crosslinking factor 1 0.0278244
FERMT2 fermitin family member 2 0.0275215
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0263493
CALD1 caldesmon 1 0.0262746
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0258024
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0256882
PDE4D phosphodiesterase 4D, cAMP-specific 0.0256794
GDI2 GDP dissociation inhibitor 2 0.0256045
CPNE1 copine I 0.0254956
ASPH aspartate beta-hydroxylase 0.0253948
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0253437
ATXN1 ataxin 1 0.024941
WWOX WW domain containing oxidoreductase 0.0249301
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0245752
NEK10 NIMA-related kinase 10 0.0244163
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0241072
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0239488
CNOT1 CCR4-NOT transcription complex, subunit 1 0.0238989
BIRC3 baculoviral IAP repeat containing 3 0.0236414
ZNFX1 zinc finger, NFX1-type containing 1 0.0234541
CALR calreticulin 0.0233264
TPM3 tropomyosin 3 0.0232391
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0229858
GRAMD1B GRAM domain containing 1B 0.0225003
SND1 staphylococcal nuclease and tudor domain containing 1 0.0216918
DNAJB6 DnaJ (Hsp40) homolog, subfamily B, member 6 0.02163
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0213498
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0213078
RABGAP1L RAB GTPase activating protein 1-like 0.0212974
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0212764
TRIM59 tripartite motif containing 59 0.0212352
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0210046
RRM2 ribonucleotide reductase M2 0.0209764
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0209281
DSCAM Down syndrome cell adhesion molecule 0.0208726
USP9X ubiquitin specific peptidase 9, X-linked 0.0208637
BRD2 bromodomain containing 2 0.0206018
DOCK5 dedicator of cytokinesis 5 0.020588
ZCCHC7 zinc finger, CCHC domain containing 7 0.0203392
RCOR1 REST corepressor 1 0.0202945
CERS2 ceramide synthase 2 0.0202091
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0201595
WNT2B wingless-type MMTV integration site family, member 2B 0.0200971
KRT18 keratin 18, type I 0.0198005
PRH1 proline-rich protein HaeIII subfamily 1 0.0196124
CANX calnexin 0.0195741
B2M beta-2-microglobulin 0.0195305
CUX1 cut-like homeobox 1 0.0195288
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0194882
SETX senataxin 0.0194723
FNIP1 folliculin interacting protein 1 0.0193014
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0190558
R3HDM2 R3H domain containing 2 0.01885
STYK1 serine/threonine/tyrosine kinase 1 0.0187957
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0185792
DUSP16 dual specificity phosphatase 16 0.0185157
RPL3 ribosomal protein L3 0.0184894
ESYT2 extended synaptotagmin-like protein 2 0.0184566
EEF1D eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) 0.0181411
MACROD2 MACRO domain containing 2 0.0179122
EIF5 eukaryotic translation initiation factor 5 0.0178646
CEP128 centrosomal protein 128kDa 0.0173965

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.23062
TXNRD1 thioredoxin reductase 1 -0.106093
TMSB10 thymosin beta 10 -0.09724
TRIO trio Rho guanine nucleotide exchange factor -0.0749278
EML4 echinoderm microtubule associated protein like 4 -0.0745327
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0737028
TFPI2 tissue factor pathway inhibitor 2 -0.0711336
KDM3A lysine (K)-specific demethylase 3A -0.0567321
ZFR zinc finger RNA binding protein -0.0555254
RTN4 reticulon 4 -0.0535842
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0513878
RPL35A ribosomal protein L35a -0.0482857
XPO1 exportin 1 -0.0481682
RSF1 remodeling and spacing factor 1 -0.0478501
ANKRD12 ankyrin repeat domain 12 -0.0463279
TAS2R14 taste receptor, type 2, member 14 -0.0460635
ATP5F1B ATP synthase F1 subunit beta -0.04595
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0457877
KPNB1 karyopherin (importin) beta 1 -0.0453195
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -0.0452038
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0447239
CAVIN1 caveolae associated protein 1 -0.0439563
ZNF292 zinc finger protein 292 -0.0438066
TLK1 tousled-like kinase 1 -0.0429504
OSMR oncostatin M receptor -0.0427299
TMEM165 transmembrane protein 165 -0.0421091
PTPRF protein tyrosine phosphatase, receptor type, F -0.0414623
SENP6 SUMO1/sentrin specific peptidase 6 -0.0410143
WSB1 WD repeat and SOCS box containing 1 -0.0409808
IGF2 insulin-like growth factor 2 -0.0409731
MYL12B myosin, light chain 12B, regulatory -0.0409713
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0408984
ANKRD28 ankyrin repeat domain 28 -0.0404905
ZBTB20 zinc finger and BTB domain containing 20 -0.0403859
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 -0.0398755
BBX bobby sox homolog (Drosophila) -0.0396712
NCOR1 nuclear receptor corepressor 1 -0.0396223
GNAS GNAS complex locus -0.0391626
SINHCAF SIN3-HDAC complex associated factor -0.0389757
IGF2BP1 insulin-like growth factor 2 mRNA binding protein 1 -0.038813
CSDE1 cold shock domain containing E1, RNA-binding -0.0388106
EPN2 epsin 2 -0.038275
EGR1 early growth response 1 -0.0376806
PHF21A PHD finger protein 21A -0.0375356
SEPTIN7 septin 7 -0.0373888
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0371536
RPL37 ribosomal protein L37 -0.0369895
CCND2 cyclin D2 -0.0369478
PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform -0.0364896
PHIP pleckstrin homology domain interacting protein -0.0362894
NF1 neurofibromin 1 -0.035756
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0356522
NCOA7 nuclear receptor coactivator 7 -0.0354471
KMT2A lysine (K)-specific methyltransferase 2A -0.0351239
UBE2H ubiquitin-conjugating enzyme E2H -0.0349073
GATAD2B GATA zinc finger domain containing 2B -0.0348438
RAD51B RAD51 paralog B -0.0343226
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0342886
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0337414
LATS2 large tumor suppressor kinase 2 -0.0335607
IGF1R insulin-like growth factor 1 receptor -0.0335396
MARCHF4 membrane associated ring-CH-type finger 4 -0.033448
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0333908
SMC4 structural maintenance of chromosomes 4 -0.0331928
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0331319
BIRC6 baculoviral IAP repeat containing 6 -0.0327332
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0325841
BRWD1 bromodomain and WD repeat domain containing 1 -0.0319767
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0318828
ZMYM2 zinc finger, MYM-type 2 -0.0318176
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.031762
CCDC91 coiled-coil domain containing 91 -0.0317262
ZMYND8 zinc finger, MYND-type containing 8 -0.0317204
UBE2K ubiquitin-conjugating enzyme E2K -0.0313405
SCAF11 SR-related CTD-associated factor 11 -0.0313275
LMAN1 lectin, mannose-binding, 1 -0.0312344
RPLP1 ribosomal protein, large, P1 -0.0312237
BRWD3 bromodomain and WD repeat domain containing 3 -0.0311576
TNPO3 transportin 3 -0.0310948
NEMF nuclear export mediator factor -0.0309322
TFDP2 transcription factor Dp-2 (E2F dimerization partner 2) -0.0308623
RPL34 ribosomal protein L34 -0.0305833
RPS8 ribosomal protein S8 -0.0303845
RPL26 ribosomal protein L26 -0.0302566
RPS21 ribosomal protein S21 -0.0302146
RBM39 RNA binding motif protein 39 -0.0301167
HMGA1 high mobility group AT-hook 1 -0.0300877
RPL12 ribosomal protein L12 -0.0299379
SRSF11 serine/arginine-rich splicing factor 11 -0.0296266
VDAC1 voltage-dependent anion channel 1 -0.0289853
RNF169 ring finger protein 169 -0.0288218
R3HDM1 R3H domain containing 1 -0.0288211
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) -0.0286445
LDHB lactate dehydrogenase B -0.0284012
H1-0 H1.0 linker histone -0.0281549
ATXN2 ataxin 2 -0.0280875
IMMT inner membrane protein, mitochondrial -0.0279862
FTL ferritin, light polypeptide -0.027985
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 -0.0278246
NUP153 nucleoporin 153kDa -0.0277084