Bimatoprost_NCI-H2347 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bimatoprost perturbation in NCI-H2347 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bimatoprost_NCI-H2347 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.125807
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0970107
LAMB3 laminin, beta 3 0.0825801
RPS12 ribosomal protein S12 0.0821751
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0768663
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.073238
HMGB2 high mobility group box 2 0.069136
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0672393
ELL2 elongation factor, RNA polymerase II, 2 0.0633242
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0618854
MT2A metallothionein 2A 0.0582268
MSN moesin 0.0566227
RPS3 ribosomal protein S3 0.0563302
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0500351
DSPP dentin sialophosphoprotein 0.0456603
RPL9 ribosomal protein L9 0.0440907
RPLP0 ribosomal protein, large, P0 0.0438224
RPL7 ribosomal protein L7 0.0435045
SDC4 syndecan 4 0.0410117
NAP1L1 nucleosome assembly protein 1-like 1 0.0399948
CANX calnexin 0.0386759
TPT1 tumor protein, translationally-controlled 1 0.0384919
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.037948
PRRC2C proline-rich coiled-coil 2C 0.0375222
RPL37A ribosomal protein L37a 0.0361924
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0359368
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0350984
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0350802
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0346763
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0344491
ENO1 enolase 1, (alpha) 0.0343703
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0339203
AKAP13 A kinase (PRKA) anchor protein 13 0.0337862
PABPC1 poly(A) binding protein, cytoplasmic 1 0.033698
KTN1 kinectin 1 (kinesin receptor) 0.0333209
LAMC2 laminin, gamma 2 0.0323411
RPL37 ribosomal protein L37 0.032189
DOCK5 dedicator of cytokinesis 5 0.0307423
ANXA1 annexin A1 0.0306747
SGMS2 sphingomyelin synthase 2 0.0306412
NDRG1 N-myc downstream regulated 1 0.0304074
RPS27A ribosomal protein S27a 0.0298237
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0285916
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0282265
NAMPT nicotinamide phosphoribosyltransferase 0.0281114
BIRC3 baculoviral IAP repeat containing 3 0.0275243
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.026913
ANO6 anoctamin 6 0.0267535
PCBP2 poly(rC) binding protein 2 0.0264378
EGFR epidermal growth factor receptor 0.0260122
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0256906
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 0.025617
B2M beta-2-microglobulin 0.0254432
MCL1 myeloid cell leukemia 1 0.0253818
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0253517
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0249348
SET SET nuclear proto-oncogene 0.0244131
RPL12 ribosomal protein L12 0.0244094
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0243282
KIAA1217 KIAA1217 0.0242983
CD44 CD44 molecule (Indian blood group) 0.0236566
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0233742
RB1CC1 RB1-inducible coiled-coil 1 0.0225479
APP amyloid beta (A4) precursor protein 0.0223824
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0222193
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase 0.0222185
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0221029
SFPQ splicing factor proline/glutamine-rich 0.0220379
VIM vimentin 0.0219921
EZR ezrin 0.0217338
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 0.0216081
VGLL3 vestigial-like family member 3 0.0213481
RBM25 RNA binding motif protein 25 0.0212197
GLS2 glutaminase 2 (liver, mitochondrial) 0.0211037
MYO5B myosin VB 0.0210256
IRS2 insulin receptor substrate 2 0.0208872
EEF1D eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) 0.0208094
PDE4D phosphodiesterase 4D, cAMP-specific 0.0208027
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.0206994
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0205968
MAST4 microtubule associated serine/threonine kinase family member 4 0.0205488
RACK1 receptor for activated C kinase 1 0.0205368
DST dystonin 0.0204147
TUFT1 tuftelin 1 0.0202307
SOD2 superoxide dismutase 2, mitochondrial 0.0199145
RPS6 ribosomal protein S6 0.0196641
SAMD4A sterile alpha motif domain containing 4A 0.0196397
ZBTB10 zinc finger and BTB domain containing 10 0.0195188
RPS4X ribosomal protein S4, X-linked 0.0195077
CALR calreticulin 0.0193702
CD109 CD109 molecule 0.0191668
USP53 ubiquitin specific peptidase 53 0.0191394
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.0188699
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0187295
TNPO1 transportin 1 0.0186794
DDIT4 DNA-damage-inducible transcript 4 0.0186339
CXCL8 chemokine (C-X-C motif) ligand 8 0.0186189
RPL13A ribosomal protein L13a 0.0185773
TPR translocated promoter region, nuclear basket protein 0.0185244
RPS17 ribosomal protein S17 0.0184279

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.336474
FN1 fibronectin 1 -0.205266
POTEF POTE ankyrin domain family, member F -0.174561
LPP LIM domain containing preferred translocation partner in lipoma -0.143683
ACTG1 actin gamma 1 -0.11701
IGFBP3 insulin-like growth factor binding protein 3 -0.0881706
LIMCH1 LIM and calponin homology domains 1 -0.0865109
TMSB10 thymosin beta 10 -0.0832886
CCND1 cyclin D1 -0.0803821
KRT7 keratin 7, type II -0.0790361
IFI27 interferon, alpha-inducible protein 27 -0.0776012
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0764109
MDK midkine (neurite growth-promoting factor 2) -0.0732139
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0729652
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0699387
CD2AP CD2-associated protein -0.0643972
TPM4 tropomyosin 4 -0.0630083
UBC ubiquitin C -0.0615433
PKM pyruvate kinase, muscle -0.0597126
LY6E lymphocyte antigen 6 complex, locus E -0.0581151
GNAS GNAS complex locus -0.0570151
FTH1 ferritin, heavy polypeptide 1 -0.0567041
S100A10 S100 calcium binding protein A10 -0.0557667
RPL8 ribosomal protein L8 -0.0550527
TMEM165 transmembrane protein 165 -0.0542011
FTL ferritin, light polypeptide -0.0535307
GRB10 growth factor receptor-bound protein 10 -0.0534258
HSPB1 heat shock 27kDa protein 1 -0.0507002
TMEM123 transmembrane protein 123 -0.0498222
FNDC3B fibronectin type III domain containing 3B -0.0468189
TMEM263 transmembrane protein 263 -0.0446319
FBXO32 F-box protein 32 -0.043592
CSTB cystatin B (stefin B) -0.0434742
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0430881
TSC22D2 TSC22 domain family, member 2 -0.0413077
UBE2H ubiquitin-conjugating enzyme E2H -0.0410262
MBOAT2 membrane bound O-acyltransferase domain containing 2 -0.0402513
HLA-B major histocompatibility complex, class I, B -0.0398841
MAP1B microtubule-associated protein 1B -0.0384758
HDLBP high density lipoprotein binding protein -0.0383955
FAM3C family with sequence similarity 3, member C -0.0373804
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0373242
RAI14 retinoic acid induced 14 -0.0372489
LMAN1 lectin, mannose-binding, 1 -0.037031
TM4SF1 transmembrane 4 L six family member 1 -0.0370121
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0368479
RPS23 ribosomal protein S23 -0.0357459
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0351766
ITCH itchy E3 ubiquitin protein ligase -0.0350816
KDM5B lysine (K)-specific demethylase 5B -0.0343617
KRT8 keratin 8, type II -0.0338142
PRRC1 proline-rich coiled-coil 1 -0.0336832
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 -0.0336609
WASF2 WAS protein family, member 2 -0.0336339
NPEPPS aminopeptidase puromycin sensitive -0.0332073
LMNA lamin A/C -0.0330787
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0326823
COPB2 coatomer protein complex, subunit beta 2 (beta prime) -0.0325699
RRBP1 ribosome binding protein 1 -0.0325298
KRT18 keratin 18, type I -0.0324743
HMGA1 high mobility group AT-hook 1 -0.0320992
S100A6 S100 calcium binding protein A6 -0.0320719
IFITM1 interferon induced transmembrane protein 1 -0.0319999
SOX4 SRY (sex determining region Y)-box 4 -0.0315797
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) -0.0311666
MCU mitochondrial calcium uniporter -0.0309247
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0306267
KPNB1 karyopherin (importin) beta 1 -0.0303246
TKT transketolase -0.0301589
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0300769
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0298815
MX2 MX dynamin-like GTPase 2 -0.02966
ARF1 ADP-ribosylation factor 1 -0.0293923
RAB11FIP1 RAB11 family interacting protein 1 (class I) -0.0291043
RPL32 ribosomal protein L32 -0.0289849
RNF213 ring finger protein 213 -0.0289264
LDHA lactate dehydrogenase A -0.0283318
LMO7 LIM domain 7 -0.0280287
MAML2 mastermind-like 2 (Drosophila) -0.0279064
SPATS2L spermatogenesis associated, serine-rich 2-like -0.0278658
RAB1A RAB1A, member RAS oncogene family -0.0276561
CTSB cathepsin B -0.0275943
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0274994
SEC24D SEC24 family member D -0.027458
CAPN2 calpain 2, (m/II) large subunit -0.027414
ZNF217 zinc finger protein 217 -0.02736
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0273221
F3 coagulation factor III (thromboplastin, tissue factor) -0.0270848
H1-0 H1.0 linker histone -0.0269528
FBXO34 F-box protein 34 -0.0269319
IFITM3 interferon induced transmembrane protein 3 -0.0264906
MSI2 musashi RNA-binding protein 2 -0.0264619
HLA-A major histocompatibility complex, class I, A -0.0263177
MAP4 microtubule-associated protein 4 -0.0262433
MRPS6 mitochondrial ribosomal protein S6 -0.0262306
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0261052
LGALS3 lectin, galactoside-binding, soluble, 3 -0.0257719
IFI6 interferon, alpha-inducible protein 6 -0.025179
MAP3K13 mitogen-activated protein kinase kinase kinase 13 -0.0251079
TRAM1 translocation associated membrane protein 1 -0.0249631