Bimatoprost_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bimatoprost perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bimatoprost_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PHIP pleckstrin homology domain interacting protein 0.1014
KDM3A lysine (K)-specific demethylase 3A 0.0974931
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0861508
PCDH9 protocadherin 9 0.0710229
JMJD1C jumonji domain containing 1C 0.0707221
ADGRV1 adhesion G protein-coupled receptor V1 0.0688696
APP amyloid beta (A4) precursor protein 0.0632107
NIPBL Nipped-B homolog (Drosophila) 0.0622415
SMYD3 SET and MYND domain containing 3 0.0581477
CALR calreticulin 0.0554408
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0544795
CAMTA1 calmodulin binding transcription activator 1 0.0536986
ANK2 ankyrin 2, neuronal 0.0521461
BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 0.0517195
STRN3 striatin, calmodulin binding protein 3 0.0510801
KMT2E lysine (K)-specific methyltransferase 2E 0.0500367
ZFAND3 zinc finger, AN1-type domain 3 0.0499632
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0497396
STAG2 stromal antigen 2 0.0495173
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0491618
PTMA prothymosin, alpha 0.0482405
DSCAM Down syndrome cell adhesion molecule 0.0480843
RCOR1 REST corepressor 1 0.0476736
AKAP12 A kinase (PRKA) anchor protein 12 0.046662
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 0.0462201
WSB1 WD repeat and SOCS box containing 1 0.0459882
SREBF2 sterol regulatory element binding transcription factor 2 0.0443115
CHD7 chromodomain helicase DNA binding protein 7 0.0413299
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0404905
OGA O-GlcNAcase 0.0388164
RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic) 0.0382012
ZNF451 zinc finger protein 451 0.0381061
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0378797
NTM neurotrimin 0.0365549
WDR43 WD repeat domain 43 0.0364941
ZNF292 zinc finger protein 292 0.0360429
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0359262
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0355016
HMGB2 high mobility group box 2 0.0353054
NHSL1 NHS-like 1 0.0349247
MARCHF6 membrane associated ring-CH-type finger 6 0.0344523
MRPS30 mitochondrial ribosomal protein S30 0.0343556
PUM1 pumilio RNA-binding family member 1 0.0343026
UBE2B ubiquitin-conjugating enzyme E2B 0.034236
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0338246
RBM33 RNA binding motif protein 33 0.033771
CTBP2 C-terminal binding protein 2 0.0331895
CDH19 cadherin 19, type 2 0.0329549
CHD1 chromodomain helicase DNA binding protein 1 0.0328334
HNRNPR heterogeneous nuclear ribonucleoprotein R 0.032522
PRTG protogenin 0.0321847
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0317814
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0315847
SAMD4A sterile alpha motif domain containing 4A 0.0312265
SP3 Sp3 transcription factor 0.0308945
FNBP1L formin binding protein 1-like 0.0307554
ATXN2 ataxin 2 0.0307284
PARD3 par-3 family cell polarity regulator 0.0306506
FUBP1 far upstream element (FUSE) binding protein 1 0.0304278
SIPA1L3 signal-induced proliferation-associated 1 like 3 0.0303462
FNDC3B fibronectin type III domain containing 3B 0.0302063
AKAP9 A kinase (PRKA) anchor protein 9 0.0290939
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) 0.028979
SCAF8 SR-related CTD-associated factor 8 0.0287628
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0284796
ARL15 ADP-ribosylation factor-like 15 0.0283145
HDAC9 histone deacetylase 9 0.0281715
RBM39 RNA binding motif protein 39 0.0279739
NCOR1 nuclear receptor corepressor 1 0.0279314
CYRIB CYFIP related Rac1 interactor B 0.0279293
SPAG9 sperm associated antigen 9 0.0278755
ZC3H13 zinc finger CCCH-type containing 13 0.0278364
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0277936
DDIT4 DNA-damage-inducible transcript 4 0.027766
RBM25 RNA binding motif protein 25 0.0275207
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0271649
ANKRD11 ankyrin repeat domain 11 0.0271164
ARID2 AT rich interactive domain 2 (ARID, RFX-like) 0.0267587
BLTP1 bridge-like lipid transfer protein family member 1 0.0264975
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 0.0263664
PSMD8 proteasome (prosome, macropain) 26S subunit, non-ATPase, 8 0.0261005
MACF1 microtubule-actin crosslinking factor 1 0.0260296
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0258058
XPO1 exportin 1 0.0256923
UBE2E1 ubiquitin-conjugating enzyme E2E 1 0.025679
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.025615
MATR3 matrin 3 0.025362
ABI2 abl-interactor 2 0.0252774
ZNF608 zinc finger protein 608 0.0251716
DOCK5 dedicator of cytokinesis 5 0.0250156
ADAM10 ADAM metallopeptidase domain 10 0.0249483
UBA2 ubiquitin-like modifier activating enzyme 2 0.024805
PICALM phosphatidylinositol binding clathrin assembly protein 0.0245124
TENM2 teneurin transmembrane protein 2 0.0244905
SBF2 SET binding factor 2 0.0242282
USP53 ubiquitin specific peptidase 53 0.0240677
PGAP1 post-GPI attachment to proteins 1 0.0240037
PRRC2C proline-rich coiled-coil 2C 0.0239146
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) 0.0238325
YES1 YES proto-oncogene 1, Src family tyrosine kinase 0.0237773

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.191561
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0778255
TMSB10 thymosin beta 10 -0.0728052
POTEF POTE ankyrin domain family, member F -0.0714473
RPS6 ribosomal protein S6 -0.0662958
PFN1 profilin 1 -0.0653336
DST dystonin -0.0635515
PEG10 paternally expressed 10 -0.0495777
CADM2 cell adhesion molecule 2 -0.0488503
SYT1 synaptotagmin I -0.0470406
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0466498
NRG1 neuregulin 1 -0.0444018
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0441174
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha -0.0434048
ERBB4 erb-b2 receptor tyrosine kinase 4 -0.0425968
MDK midkine (neurite growth-promoting factor 2) -0.041021
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0408228
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0395418
MEIS2 Meis homeobox 2 -0.0394348
PCLO piccolo presynaptic cytomatrix protein -0.0394338
RPL23 ribosomal protein L23 -0.0390473
ACTG1 actin gamma 1 -0.0384658
FTL ferritin, light polypeptide -0.0381763
PDE4D phosphodiesterase 4D, cAMP-specific -0.0374542
FOXP2 forkhead box P2 -0.0357008
ATP5F1B ATP synthase F1 subunit beta -0.0355209
MAP1B microtubule-associated protein 1B -0.0350768
RPS16 ribosomal protein S16 -0.0334068
FAT1 FAT atypical cadherin 1 -0.0331352
TOX thymocyte selection-associated high mobility group box -0.0325199
SLC38A2 solute carrier family 38, member 2 -0.031882
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.031547
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0312599
RPLP1 ribosomal protein, large, P1 -0.0311633
FAM171B family with sequence similarity 171, member B -0.0309364
RAB7A RAB7A, member RAS oncogene family -0.0307896
TPT1 tumor protein, translationally-controlled 1 -0.0307285
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.030071
HMCN1 hemicentin 1 -0.0297357
RPS19 ribosomal protein S19 -0.029326
FGF13 fibroblast growth factor 13 -0.0289922
RPS21 ribosomal protein S21 -0.0289017
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0283841
MPG N-methylpurine-DNA glycosylase -0.0281497
NR2F1 nuclear receptor subfamily 2, group F, member 1 -0.0281308
KPNB1 karyopherin (importin) beta 1 -0.0281222
HSPB1 heat shock 27kDa protein 1 -0.0280693
TUBA1B tubulin, alpha 1b -0.0279495
AHNAK AHNAK nucleoprotein -0.0273057
GALNTL6 polypeptide N-acetylgalactosaminyltransferase-like 6 -0.0272253
RPL19 ribosomal protein L19 -0.0272127
RPL12 ribosomal protein L12 -0.0271296
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0269035
EMP1 epithelial membrane protein 1 -0.0268523
RPS5 ribosomal protein S5 -0.0265447
SIK2 salt-inducible kinase 2 -0.0265403
TENM3 teneurin transmembrane protein 3 -0.0263359
RPLP2 ribosomal protein, large, P2 -0.0260495
DNAH14 dynein, axonemal, heavy chain 14 -0.0257274
DPYD dihydropyrimidine dehydrogenase -0.0251428
ATP5F1E ATP synthase F1 subunit epsilon -0.0251158
LYST lysosomal trafficking regulator -0.0248772
SHROOM3 shroom family member 3 -0.024874
MRPS6 mitochondrial ribosomal protein S6 -0.0240735
CNRIP1 cannabinoid receptor interacting protein 1 -0.023841
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.023261
SCFD1 sec1 family domain containing 1 -0.0232541
S100A10 S100 calcium binding protein A10 -0.0231219
ZMYND8 zinc finger, MYND-type containing 8 -0.0231139
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.0230014
COTL1 coactosin-like F-actin binding protein 1 -0.02293
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0225677
ANKRD33B ankyrin repeat domain 33B -0.0225297
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0223808
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0222529
IQGAP1 IQ motif containing GTPase activating protein 1 -0.0218845
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0214531
TBC1D32 TBC1 domain family, member 32 -0.0213708
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.0212184
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.021186
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0211386
G2E3 G2/M-phase specific E3 ubiquitin protein ligase -0.0209832
RPL31 ribosomal protein L31 -0.0207901
PDCD5 programmed cell death 5 -0.0207708
S100A9 S100 calcium binding protein A9 -0.0206308
CBX3 chromobox homolog 3 -0.0205739
SERF2 small EDRK-rich factor 2 -0.0203631
SEMA3E sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E -0.0203021
RPL8 ribosomal protein L8 -0.0202053
GNAS GNAS complex locus -0.0200442
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0200231
RPL34 ribosomal protein L34 -0.0198913
ISG15 ISG15 ubiquitin-like modifier -0.0195765
PRORP protein only RNase P catalytic subunit -0.0195079
ACTN4 actinin, alpha 4 -0.0193663
CYB5R3 cytochrome b5 reductase 3 -0.0193508
LMAN1 lectin, mannose-binding, 1 -0.0191274
DEK DEK proto-oncogene -0.0191038
FN1 fibronectin 1 -0.0190453
USH2A Usher syndrome 2A (autosomal recessive, mild) -0.0190313