Bimatoprost_SW 1088 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bimatoprost perturbation in SW 1088 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bimatoprost_SW 1088 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MYH9 myosin, heavy chain 9, non-muscle 0.120495
COL6A3 collagen, type VI, alpha 3 0.0924539
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0916518
MACF1 microtubule-actin crosslinking factor 1 0.0703451
PRELID2 PRELI domain containing 2 0.0673855
FNDC3B fibronectin type III domain containing 3B 0.0658347
CDH13 cadherin 13 0.0645119
CXCL8 chemokine (C-X-C motif) ligand 8 0.0625477
FN1 fibronectin 1 0.0594373
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0575676
KYNU kynureninase 0.0531693
FNIP1 folliculin interacting protein 1 0.052945
VCL vinculin 0.0521541
EXT1 exostosin glycosyltransferase 1 0.0498207
ENO1 enolase 1, (alpha) 0.0497994
NAV2 neuron navigator 2 0.047039
NCOR2 nuclear receptor corepressor 2 0.0464975
RAD51B RAD51 paralog B 0.0462219
SDK1 sidekick cell adhesion molecule 1 0.0457907
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.043053
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0429368
TIMP3 TIMP metallopeptidase inhibitor 3 0.0428867
FER fer (fps/fes related) tyrosine kinase 0.0425679
CANX calnexin 0.0422289
SOD2 superoxide dismutase 2, mitochondrial 0.0421673
MSN moesin 0.0419983
EGFR epidermal growth factor receptor 0.04187
INTS6 integrator complex subunit 6 0.0416955
ZSWIM6 zinc finger, SWIM-type containing 6 0.0416459
ANO6 anoctamin 6 0.041219
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.0411458
DST dystonin 0.0393251
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0382226
HIP1 huntingtin interacting protein 1 0.0381584
EXOC6B exocyst complex component 6B 0.0362036
FBXL7 F-box and leucine-rich repeat protein 7 0.0361949
CLIC4 chloride intracellular channel 4 0.0357665
FAM20C family with sequence similarity 20, member C 0.0344775
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0339347
ATXN1 ataxin 1 0.0331645
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0329596
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0322973
PMEPA1 prostate transmembrane protein, androgen induced 1 0.0322298
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 0.0321583
PDE4D phosphodiesterase 4D, cAMP-specific 0.0319274
MCL1 myeloid cell leukemia 1 0.0318651
HIPK2 homeodomain interacting protein kinase 2 0.0317895
ZNF638 zinc finger protein 638 0.0316662
PSD3 pleckstrin and Sec7 domain containing 3 0.0314354
GLIS3 GLIS family zinc finger 3 0.0314014
MYOF myoferlin 0.0311328
NRXN3 neurexin 3 0.0310037
AKAP13 A kinase (PRKA) anchor protein 13 0.0308197
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0308087
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0304208
F3 coagulation factor III (thromboplastin, tissue factor) 0.0302664
FAM13A family with sequence similarity 13, member A 0.029895
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) 0.0295141
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0293524
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0292744
GRB10 growth factor receptor-bound protein 10 0.0284897
RUNX1 runt-related transcription factor 1 0.0283812
TNS3 tensin 3 0.0282995
CUX1 cut-like homeobox 1 0.0280161
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0277787
CSMD2 CUB and Sushi multiple domains 2 0.027689
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.0274868
JAK1 Janus kinase 1 0.0274614
NEDD4 neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase 0.0272062
TTC3 tetratricopeptide repeat domain 3 0.0268496
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0268414
LAMB1 laminin, beta 1 0.0266498
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0261895
BCAR3 breast cancer anti-estrogen resistance 3 0.0260116
RSRC1 arginine/serine-rich coiled-coil 1 0.0258992
VPS13B vacuolar protein sorting 13 homolog B (yeast) 0.0258251
VEGFC vascular endothelial growth factor C 0.0258246
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0257585
RFX8 RFX family member 8, lacking RFX DNA binding domain 0.025706
NAV1 neuron navigator 1 0.0254876
JPH2 junctophilin 2 0.0254384
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0249052
TRIO trio Rho guanine nucleotide exchange factor 0.024593
PDLIM5 PDZ and LIM domain 5 0.0244904
DENND1A DENN/MADD domain containing 1A 0.024478
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0244616
HMGA2 high mobility group AT-hook 2 0.0243616
PRKCA protein kinase C, alpha 0.0243114
ZFAND3 zinc finger, AN1-type domain 3 0.0242592
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0241042
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0240292
LPP LIM domain containing preferred translocation partner in lipoma 0.0239979
HDAC9 histone deacetylase 9 0.0239923
NF1 neurofibromin 1 0.0238692
EIF4B eukaryotic translation initiation factor 4B 0.0237664
CCDC18 coiled-coil domain containing 18 0.0236286
KDM3B lysine (K)-specific demethylase 3B 0.0235978
ANLN anillin, actin binding protein 0.0235917
PEAK1 pseudopodium-enriched atypical kinase 1 0.0235026
ZMIZ1 zinc finger, MIZ-type containing 1 0.0233989

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.227015
TMSB10 thymosin beta 10 -0.216836
MT2A metallothionein 2A -0.16954
HLA-B major histocompatibility complex, class I, B -0.147616
VIM vimentin -0.145599
IGFBP3 insulin-like growth factor binding protein 3 -0.132385
NDRG1 N-myc downstream regulated 1 -0.11297
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.102322
TGFBI transforming growth factor, beta-induced, 68kDa -0.101339
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0828277
FTL ferritin, light polypeptide -0.0767699
RPL35A ribosomal protein L35a -0.058794
CADM1 cell adhesion molecule 1 -0.0557153
S100A9 S100 calcium binding protein A9 -0.0523424
AKAP9 A kinase (PRKA) anchor protein 9 -0.0516931
RPL34 ribosomal protein L34 -0.0514192
LOXL2 lysyl oxidase-like 2 -0.0502674
HLA-C major histocompatibility complex, class I, C -0.0467695
RTN4 reticulon 4 -0.0466814
RAB1A RAB1A, member RAS oncogene family -0.0458311
IGFBP7 insulin-like growth factor binding protein 7 -0.0453808
TPT1 tumor protein, translationally-controlled 1 -0.0440248
B2M beta-2-microglobulin -0.0440243
GARS1 glycyl-tRNA synthetase 1 -0.0430823
LGALS1 lectin, galactoside-binding, soluble, 1 -0.041443
TAGLN2 transgelin 2 -0.0402561
H3-3B H3.3 histone B -0.0393383
RPLP1 ribosomal protein, large, P1 -0.0391385
MAP4 microtubule-associated protein 4 -0.0377881
MT1X metallothionein 1X -0.0376923
FTH1 ferritin, heavy polypeptide 1 -0.0371341
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0369861
FSCN1 fascin actin-bundling protein 1 -0.0362402
PTMA prothymosin, alpha -0.0360263
RPS6KC1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 -0.0353672
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 -0.0350258
BHLHE40 basic helix-loop-helix family, member e40 -0.034845
SCAF11 SR-related CTD-associated factor 11 -0.0342382
RPLP2 ribosomal protein, large, P2 -0.0340389
NAMPT nicotinamide phosphoribosyltransferase -0.0339052
SRPK2 SRSF protein kinase 2 -0.0339004
ANXA2 annexin A2 -0.0338567
KDM5B lysine (K)-specific demethylase 5B -0.0335572
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0330502
KMT2C lysine (K)-specific methyltransferase 2C -0.0330397
ELF2 E74-like factor 2 (ets domain transcription factor) -0.0325715
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 -0.0324151
RPS6 ribosomal protein S6 -0.0322874
SERF2 small EDRK-rich factor 2 -0.0321369
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -0.032016
CLTC clathrin, heavy chain (Hc) -0.0319405
RPL23 ribosomal protein L23 -0.0319397
EIF1 eukaryotic translation initiation factor 1 -0.0313733
RPL31 ribosomal protein L31 -0.0312797
COL1A2 collagen, type I, alpha 2 -0.031218
RPS17 ribosomal protein S17 -0.0310465
UBE2H ubiquitin-conjugating enzyme E2H -0.0309503
SETD5 SET domain containing 5 -0.030831
RPL36 ribosomal protein L36 -0.0305583
IQGAP1 IQ motif containing GTPase activating protein 1 -0.0299251
MARCHF6 membrane associated ring-CH-type finger 6 -0.0296218
EIF5B eukaryotic translation initiation factor 5B -0.0295402
CAV1 caveolin 1, caveolae protein, 22kDa -0.0294756
ANKIB1 ankyrin repeat and IBR domain containing 1 -0.0293225
ELL2 elongation factor, RNA polymerase II, 2 -0.0292042
RPL37 ribosomal protein L37 -0.0289779
PMM2 phosphomannomutase 2 -0.0289266
RNF24 ring finger protein 24 -0.0287778
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0286358
SREK1 splicing regulatory glutamine/lysine-rich protein 1 -0.0285169
SNX6 sorting nexin 6 -0.0276227
TRA2A transformer 2 alpha homolog (Drosophila) -0.027608
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0275784
SDC4 syndecan 4 -0.0272361
RPS19 ribosomal protein S19 -0.0272194
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0263633
WTAP Wilms tumor 1 associated protein -0.0263207
PXMP2 peroxisomal membrane protein 2, 22kDa -0.0261785
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 -0.0261758
ACTN4 actinin, alpha 4 -0.0258818
CUL3 cullin 3 -0.0258623
RPS23 ribosomal protein S23 -0.0257436
FKBP10 FK506 binding protein 10, 65 kDa -0.0256228
TXNIP thioredoxin interacting protein -0.0255831
RPL5 ribosomal protein L5 -0.0254762
MARCKS myristoylated alanine-rich protein kinase C substrate -0.025283
TPM4 tropomyosin 4 -0.0252825
APLP2 amyloid beta (A4) precursor-like protein 2 -0.0249521
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0248229
SLC38A2 solute carrier family 38, member 2 -0.0246299
RAP1B RAP1B, member of RAS oncogene family -0.0246072
SUCO SUN domain containing ossification factor -0.0245427
RPL11 ribosomal protein L11 -0.024408
NPC1 Niemann-Pick disease, type C1 -0.0242279
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like -0.0241266
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.0237774
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0234223
RPL36A ribosomal protein L36a -0.0234046
RARS1 arginyl-tRNA synthetase 1 -0.023404
COL1A1 collagen, type I, alpha 1 -0.0233954