Bimatoprost_SW 900 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bimatoprost perturbation in SW 900 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bimatoprost_SW 900 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 0.0524165
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0451107
NDRG1 N-myc downstream regulated 1 0.0442769
SAMD4A sterile alpha motif domain containing 4A 0.0433031
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0400412
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0374133
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0368234
FAM13A family with sequence similarity 13, member A 0.0358562
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.03567
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0354581
ASPH aspartate beta-hydroxylase 0.034937
PDE4D phosphodiesterase 4D, cAMP-specific 0.034398
ERRFI1 ERBB receptor feedback inhibitor 1 0.0328854
RPS12 ribosomal protein S12 0.031944
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0308723
MCL1 myeloid cell leukemia 1 0.0304777
PRELID2 PRELI domain containing 2 0.030177
DOCK5 dedicator of cytokinesis 5 0.0289644
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0286511
TRIO trio Rho guanine nucleotide exchange factor 0.0274351
INTS6 integrator complex subunit 6 0.0271536
EFNA5 ephrin-A5 0.0270548
EGFR epidermal growth factor receptor 0.0270477
MYOF myoferlin 0.0269006
SOD2 superoxide dismutase 2, mitochondrial 0.0267974
AKAP13 A kinase (PRKA) anchor protein 13 0.0267505
PSD3 pleckstrin and Sec7 domain containing 3 0.0260891
ENO1 enolase 1, (alpha) 0.0260848
IRS2 insulin receptor substrate 2 0.0250011
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0240259
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0236762
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0234694
ANGPTL4 angiopoietin-like 4 0.0232388
FAT1 FAT atypical cadherin 1 0.0226935
FLNB filamin B, beta 0.0221378
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0220296
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0220287
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0218086
STC1 stanniocalcin 1 0.0216609
BASP1 brain abundant, membrane attached signal protein 1 0.0214666
ESYT2 extended synaptotagmin-like protein 2 0.0214623
BZW1 basic leucine zipper and W2 domains 1 0.0213652
EZR ezrin 0.0212206
FAM107B family with sequence similarity 107, member B 0.0210939
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.020679
PTPRM protein tyrosine phosphatase, receptor type, M 0.0202268
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0196448
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0194107
MBNL1 muscleblind-like splicing regulator 1 0.0192763
NAMPT nicotinamide phosphoribosyltransferase 0.0192356
FMNL2 formin-like 2 0.019215
DUSP6 dual specificity phosphatase 6 0.019135
NEBL nebulette 0.0190909
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0184357
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0182758
ANKRD28 ankyrin repeat domain 28 0.0181104
SVIL supervillin 0.0177538
BIRC3 baculoviral IAP repeat containing 3 0.0176545
PTK2 protein tyrosine kinase 2 0.0176455
SIRT1 sirtuin 1 0.0174602
PDE10A phosphodiesterase 10A 0.0173777
SEMA4A sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A 0.0172242
EIF1 eukaryotic translation initiation factor 1 0.0171353
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0170027
LHFPL2 lipoma HMGIC fusion partner-like 2 0.016871
NFATC2 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 0.016694
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.016693
RFX2 regulatory factor X, 2 (influences HLA class II expression) 0.0166354
ZNF638 zinc finger protein 638 0.0166051
FKBP5 FK506 binding protein 5 0.01659
PLIN2 perilipin 2 0.0162382
AHNAK AHNAK nucleoprotein 0.0161517
DSPP dentin sialophosphoprotein 0.0160187
APP amyloid beta (A4) precursor protein 0.0155764
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0155026
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0153455
RPS4X ribosomal protein S4, X-linked 0.0153436
LIMCH1 LIM and calponin homology domains 1 0.0152494
RPL9 ribosomal protein L9 0.0151003
MACF1 microtubule-actin crosslinking factor 1 0.0149193
TRA2A transformer 2 alpha homolog (Drosophila) 0.0148986
MAML3 mastermind-like 3 (Drosophila) 0.0148877
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0148812
ARHGAP21 Rho GTPase activating protein 21 0.0148708
LAMB3 laminin, beta 3 0.0148424
CEMIP cell migration inducing protein, hyaluronan binding 0.0146669
RPL36A ribosomal protein L36a 0.0145337
PICALM phosphatidylinositol binding clathrin assembly protein 0.0143745
PDIA4 protein disulfide isomerase family A, member 4 0.0142647
DSCAM Down syndrome cell adhesion molecule 0.0141625
HSPA1A heat shock 70kDa protein 1A 0.0141491
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0141333
NFE2L1 nuclear factor, erythroid 2-like 1 0.0140103
TMF1 TATA element modulatory factor 1 0.0139779
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.013799
HNRNPH3 heterogeneous nuclear ribonucleoprotein H3 (2H9) 0.0137824
ANXA1 annexin A1 0.0135838
MSN moesin 0.0134955
HSPA8 heat shock 70kDa protein 8 0.0134843
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0134257

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.473355
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.324209
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) -0.234846
FN1 fibronectin 1 -0.200912
NRG1 neuregulin 1 -0.115538
IFI27 interferon, alpha-inducible protein 27 -0.104185
FTH1 ferritin, heavy polypeptide 1 -0.0904584
P4HB prolyl 4-hydroxylase, beta polypeptide -0.082008
SQSTM1 sequestosome 1 -0.0789027
SYT1 synaptotagmin I -0.078017
HLA-B major histocompatibility complex, class I, B -0.071938
ITGA1 integrin, alpha 1 -0.0656241
TMSB10 thymosin beta 10 -0.0643096
MAP1B microtubule-associated protein 1B -0.0590034
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0577503
EXT1 exostosin glycosyltransferase 1 -0.0574407
FTL ferritin, light polypeptide -0.0540227
PKM pyruvate kinase, muscle -0.0537778
CENPF centromere protein F, 350/400kDa -0.0524156
NRP1 neuropilin 1 -0.0503161
GLIS3 GLIS family zinc finger 3 -0.0491516
S100A6 S100 calcium binding protein A6 -0.0472681
TMEM156 transmembrane protein 156 -0.0459946
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0457403
VCL vinculin -0.0453403
OSMR oncostatin M receptor -0.0451624
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0433327
KLHL5 kelch-like family member 5 -0.0427231
ETV1 ets variant 1 -0.0424719
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0398813
TMEM165 transmembrane protein 165 -0.0395572
MKI67 marker of proliferation Ki-67 -0.0392618
LY6E lymphocyte antigen 6 complex, locus E -0.0383729
FNBP1 formin binding protein 1 -0.038193
MBD5 methyl-CpG binding domain protein 5 -0.0381573
EGR1 early growth response 1 -0.0378821
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0377646
NTN4 netrin 4 -0.0363553
HMGA2 high mobility group AT-hook 2 -0.0352015
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0348404
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0348168
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0338499
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0337816
SMOX spermine oxidase -0.03286
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0327433
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0307147
CALU calumenin -0.0302599
NCOA7 nuclear receptor coactivator 7 -0.0302093
PTBP3 polypyrimidine tract binding protein 3 -0.0296602
TXNIP thioredoxin interacting protein -0.0296429
LCORL ligand dependent nuclear receptor corepressor-like -0.0290253
HMGA1 high mobility group AT-hook 1 -0.0288182
LOC102724023 ES1 protein homolog, mitochondrial -0.0283156
SOX4 SRY (sex determining region Y)-box 4 -0.0279119
RTN4 reticulon 4 -0.027621
SEC31A SEC31 homolog A (S. cerevisiae) -0.0271264
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) -0.0271089
SOS1 son of sevenless homolog 1 (Drosophila) -0.0269257
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0264381
ZBTB20 zinc finger and BTB domain containing 20 -0.0261301
FAF2 Fas associated factor family member 2 -0.0254927
ACBD3 acyl-CoA binding domain containing 3 -0.0254236
LRP5 low density lipoprotein receptor-related protein 5 -0.0253753
RRBP1 ribosome binding protein 1 -0.0251975
ACTN4 actinin, alpha 4 -0.0251935
TAS2R14 taste receptor, type 2, member 14 -0.0250846
TM9SF3 transmembrane 9 superfamily member 3 -0.0250302
KRT81 keratin 81, type II -0.0249589
HLA-A major histocompatibility complex, class I, A -0.0248829
SYNJ2 synaptojanin 2 -0.0245401
SSH1 slingshot protein phosphatase 1 -0.0244172
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0242943
CPEB4 cytoplasmic polyadenylation element binding protein 4 -0.0241928
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) -0.0238981
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0237319
ATP5F1B ATP synthase F1 subunit beta -0.0234137
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 -0.0233188
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0232753
TMEM263 transmembrane protein 263 -0.0230507
TSC22D1 TSC22 domain family, member 1 -0.0229098
TXNRD1 thioredoxin reductase 1 -0.022893
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0225642
TMEM131 transmembrane protein 131 -0.022509
RAB31 RAB31, member RAS oncogene family -0.022505
ZMYND8 zinc finger, MYND-type containing 8 -0.0223971
RPS21 ribosomal protein S21 -0.0223703
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0223698
ETNK1 ethanolamine kinase 1 -0.0222914
ZNF644 zinc finger protein 644 -0.0221175
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.0219681
KDM5B lysine (K)-specific demethylase 5B -0.0218558
TPI1 triosephosphate isomerase 1 -0.0218154
NPC1 Niemann-Pick disease, type C1 -0.0214951
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0213498
PAFAH1B1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa) -0.0210891
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.021083
FAM20C family with sequence similarity 20, member C -0.0210644
ATN1 atrophin 1 -0.0210612
UBE2K ubiquitin-conjugating enzyme E2K -0.0210583
UBXN4 UBX domain protein 4 -0.0209036