Bimiralisib_NCI-H1573 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bimiralisib perturbation in NCI-H1573 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bimiralisib_NCI-H1573 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.249061
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.114862
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0873239
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0814088
ELL2 elongation factor, RNA polymerase II, 2 0.0795973
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.077892
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0769314
FAM13A family with sequence similarity 13, member A 0.060231
PDE4D phosphodiesterase 4D, cAMP-specific 0.060055
JMJD1C jumonji domain containing 1C 0.051399
DSCAM Down syndrome cell adhesion molecule 0.0507224
VMP1 vacuole membrane protein 1 0.0504279
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0445074
TMCO3 transmembrane and coiled-coil domains 3 0.0440193
NAMPT nicotinamide phosphoribosyltransferase 0.0411816
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0388545
ARRDC3 arrestin domain containing 3 0.0369552
NSUN6 NOP2/Sun domain family, member 6 0.0369327
CPE carboxypeptidase E 0.0368972
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 0.0349834
AKAP9 A kinase (PRKA) anchor protein 9 0.034224
EYA2 EYA transcriptional coactivator and phosphatase 2 0.0327172
SPAG9 sperm associated antigen 9 0.0324005
AGO2 argonaute RISC catalytic component 2 0.0319654
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0317913
RPS2 ribosomal protein S2 0.0310893
NR4A3 nuclear receptor subfamily 4, group A, member 3 0.0309581
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0308413
RPS12 ribosomal protein S12 0.0305213
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0300261
GOLGB1 golgin B1 0.029374
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 0.029314
RALGAPA1 Ral GTPase activating protein, alpha subunit 1 (catalytic) 0.0292814
PCBP2 poly(rC) binding protein 2 0.0289686
PDIA3 protein disulfide isomerase family A, member 3 0.0289111
KDM2A lysine (K)-specific demethylase 2A 0.0283195
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.0283101
KYNU kynureninase 0.0279256
GOLGA4 golgin A4 0.0277624
ZNF638 zinc finger protein 638 0.0271897
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase 0.0271231
REL v-rel avian reticuloendotheliosis viral oncogene homolog 0.0271183
TSC22D2 TSC22 domain family, member 2 0.0263211
DOCK5 dedicator of cytokinesis 5 0.02613
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0255167
RPS3 ribosomal protein S3 0.0248564
NGLY1 N-glycanase 1 0.0244889
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide 0.0243454
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0241088
ERRFI1 ERBB receptor feedback inhibitor 1 0.0239113
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0238457
PM20D1 peptidase M20 domain containing 1 0.0237835
PTPRD protein tyrosine phosphatase, receptor type, D 0.0237111
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0237042
SIK3 SIK family kinase 3 0.0236359
RPS6 ribosomal protein S6 0.0235375
B2M beta-2-microglobulin 0.0233466
BPTF bromodomain PHD finger transcription factor 0.0230127
CCNH cyclin H 0.0227787
TMF1 TATA element modulatory factor 1 0.0225689
PRELID2 PRELI domain containing 2 0.0221486
RNF145 ring finger protein 145 0.0221128
CSNK1A1 casein kinase 1, alpha 1 0.0217517
AHR aryl hydrocarbon receptor 0.0216922
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0216838
SUCO SUN domain containing ossification factor 0.0213498
GPHN gephyrin 0.0212701
WDR26 WD repeat domain 26 0.0212005
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0211901
ATF6 activating transcription factor 6 0.0211429
ANKRD17 ankyrin repeat domain 17 0.0204421
HELZ helicase with zinc finger 0.020373
FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 0.0201109
RPL17-C18ORF32 RPL17-C18orf32 readthrough 0.0199573
MAP7 microtubule-associated protein 7 0.0197272
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0196499
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0196366
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 0.0194872
KIAA1217 KIAA1217 0.0194391
KMT2E lysine (K)-specific methyltransferase 2E 0.0191569
FAAH2 fatty acid amide hydrolase 2 0.0190727
CES1 carboxylesterase 1 0.0190538
CHD1 chromodomain helicase DNA binding protein 1 0.018686
ZC3H12B zinc finger CCCH-type containing 12B 0.0186669
MYO6 myosin VI 0.018641
EIF4B eukaryotic translation initiation factor 4B 0.0185454
BOD1L1 biorientation of chromosomes in cell division 1-like 1 0.0181915
BMP6 bone morphogenetic protein 6 0.0181703
TES testin LIM domain protein 0.0181515
RBM39 RNA binding motif protein 39 0.0179108
RPS8 ribosomal protein S8 0.0178895
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0176767
DENND4A DENN/MADD domain containing 4A 0.0176729
RAD51B RAD51 paralog B 0.0176646
ZBTB20 zinc finger and BTB domain containing 20 0.0176334
ZNF292 zinc finger protein 292 0.0173433
NFE2L2 nuclear factor, erythroid 2-like 2 0.0173371
USP9X ubiquitin specific peptidase 9, X-linked 0.0173057
PER2 period circadian clock 2 0.0172637
DTNA dystrobrevin, alpha 0.0170772

decreased expression

Symbol Name Standardized Value
EGFR epidermal growth factor receptor -0.244874
THSD4 thrombospondin, type I, domain containing 4 -0.2065
ASPH aspartate beta-hydroxylase -0.202461
PTPRM protein tyrosine phosphatase, receptor type, M -0.185107
TMSB10 thymosin beta 10 -0.160669
LAMC2 laminin, gamma 2 -0.14
ACTG1 actin gamma 1 -0.116514
SHANK2 SH3 and multiple ankyrin repeat domains 2 -0.0916981
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) -0.0838418
ANXA2 annexin A2 -0.0835791
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0830168
PKM pyruvate kinase, muscle -0.080628
KRT18 keratin 18, type I -0.080062
SCEL sciellin -0.0775147
CAV1 caveolin 1, caveolae protein, 22kDa -0.0727115
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 -0.0720926
LAMA4 laminin, alpha 4 -0.0661744
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0656456
AHNAK AHNAK nucleoprotein -0.0650532
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0629723
LDHA lactate dehydrogenase A -0.0607882
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0607679
SOD2 superoxide dismutase 2, mitochondrial -0.0586228
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0563446
S100A10 S100 calcium binding protein A10 -0.0547607
TXNRD1 thioredoxin reductase 1 -0.0541395
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.0540587
OSMR oncostatin M receptor -0.0540187
FLNB filamin B, beta -0.0534761
H1-0 H1.0 linker histone -0.0528693
CCND1 cyclin D1 -0.050626
NPAS2 neuronal PAS domain protein 2 -0.048103
RNF213 ring finger protein 213 -0.0477878
KRT8 keratin 8, type II -0.0476591
RAB27B RAB27B, member RAS oncogene family -0.0474249
PDLIM5 PDZ and LIM domain 5 -0.0471567
MACF1 microtubule-actin crosslinking factor 1 -0.0470109
KRT7 keratin 7, type II -0.0463999
CP ceruloplasmin (ferroxidase) -0.0460282
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0458882
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0456415
LPP LIM domain containing preferred translocation partner in lipoma -0.0454777
BZW1 basic leucine zipper and W2 domains 1 -0.0444866
LAMB3 laminin, beta 3 -0.0437067
AHNAK2 AHNAK nucleoprotein 2 -0.0427316
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0394102
INTS6 integrator complex subunit 6 -0.0392359
SLC38A2 solute carrier family 38, member 2 -0.0390154
GSK3B glycogen synthase kinase 3 beta -0.0386781
NABP1 nucleic acid binding protein 1 -0.038584
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 -0.0384661
MAML3 mastermind-like 3 (Drosophila) -0.0381252
PATJ PATJ crumbs cell polarity complex component -0.0378538
GRAMD1B GRAM domain containing 1B -0.0378261
PRKCA protein kinase C, alpha -0.0372005
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.0368498
POTEF POTE ankyrin domain family, member F -0.0355567
LOC112694756 uncharaterized LOC112694756 -0.0350689
GRB10 growth factor receptor-bound protein 10 -0.0347777
SDC1 syndecan 1 -0.0346212
LRP1B low density lipoprotein receptor-related protein 1B -0.0332284
MYO1D myosin ID -0.0331352
IGF1R insulin-like growth factor 1 receptor -0.0328535
AKAP13 A kinase (PRKA) anchor protein 13 -0.0327038
PLEC plectin -0.0322726
CUX1 cut-like homeobox 1 -0.0322482
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.0321492
SLC35F3 solute carrier family 35, member F3 -0.0321324
NTSR1 neurotensin receptor 1 (high affinity) -0.0320963
TPM4 tropomyosin 4 -0.0320779
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila) -0.0312096
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.0306456
PTMA prothymosin, alpha -0.0303654
LMO7 LIM domain 7 -0.0302369
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0300265
EGR1 early growth response 1 -0.0300248
AMOTL1 angiomotin like 1 -0.0298378
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.02958
MAP3K20 mitogen-activated protein kinase kinase kinase 20 -0.0293891
ITGA6 integrin, alpha 6 -0.0292245
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0288871
PSD3 pleckstrin and Sec7 domain containing 3 -0.0280559
MCL1 myeloid cell leukemia 1 -0.0274481
EHBP1 EH domain binding protein 1 -0.0272133
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0272049
EFNA5 ephrin-A5 -0.027195
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0271079
SPIRE1 spire-type actin nucleation factor 1 -0.0271075
HMGA1 high mobility group AT-hook 1 -0.0270705
GM2A GM2 ganglioside activator -0.0270008
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0267377
MBOAT2 membrane bound O-acyltransferase domain containing 2 -0.0267303
RIN2 Ras and Rab interactor 2 -0.026228
PTPRJ protein tyrosine phosphatase, receptor type, J -0.0261739
SDC4 syndecan 4 -0.0260531
PTK2 protein tyrosine kinase 2 -0.0259453
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) -0.0256575
DSG2 desmoglein 2 -0.0254672
CELSR1 cadherin, EGF LAG seven-pass G-type receptor 1 -0.0252694
FERMT1 fermitin family member 1 -0.0252308