Bimiralisib_NCI-H23 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bimiralisib perturbation in NCI-H23 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bimiralisib_NCI-H23 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.10145
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0727415
TXNRD1 thioredoxin reductase 1 0.0671023
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide 0.0642728
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0636062
IFI6 interferon, alpha-inducible protein 6 0.0633937
IGF1R insulin-like growth factor 1 receptor 0.0608768
PDE4D phosphodiesterase 4D, cAMP-specific 0.051803
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0514545
SNAP25 synaptosomal-associated protein, 25kDa 0.0490182
VCL vinculin 0.0450333
BMP5 bone morphogenetic protein 5 0.0438782
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0423614
RIMS2 regulating synaptic membrane exocytosis 2 0.0391406
SSH2 slingshot protein phosphatase 2 0.038898
ZSWIM6 zinc finger, SWIM-type containing 6 0.0378556
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0377816
TFPI2 tissue factor pathway inhibitor 2 0.037728
PDE10A phosphodiesterase 10A 0.0369375
DSCAM Down syndrome cell adhesion molecule 0.0364878
MED13L mediator complex subunit 13-like 0.0363433
RPS21 ribosomal protein S21 0.0359778
ELL2 elongation factor, RNA polymerase II, 2 0.0344616
CALD1 caldesmon 1 0.032807
DENND5B DENN/MADD domain containing 5B 0.0325563
ADAR adenosine deaminase, RNA-specific 0.0321456
RPL23 ribosomal protein L23 0.0320442
REL v-rel avian reticuloendotheliosis viral oncogene homolog 0.031942
NFE2L2 nuclear factor, erythroid 2-like 2 0.0316752
BASP1 brain abundant, membrane attached signal protein 1 0.0309425
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B 0.0309213
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0303775
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0297268
AEBP2 AE binding protein 2 0.0296181
ZNFX1 zinc finger, NFX1-type containing 1 0.0295513
RNF145 ring finger protein 145 0.0282967
AHNAK AHNAK nucleoprotein 0.0280953
BBS9 Bardet-Biedl syndrome 9 0.0278684
MRTFA myocardin related transcription factor A 0.0276322
MACROD2 MACRO domain containing 2 0.0274242
DST dystonin 0.0273325
KLF6 Kruppel-like factor 6 0.0271336
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0267232
FNDC3B fibronectin type III domain containing 3B 0.0262791
PMEPA1 prostate transmembrane protein, androgen induced 1 0.0261977
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0260636
SPIDR scaffolding protein involved in DNA repair 0.0259489
PDE4B phosphodiesterase 4B, cAMP-specific 0.0255967
CLIP1 CAP-GLY domain containing linker protein 1 0.0255837
IFIH1 interferon induced with helicase C domain 1 0.02517
RPLP0 ribosomal protein, large, P0 0.0242642
MAP7 microtubule-associated protein 7 0.0241377
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0240399
LRP1B low density lipoprotein receptor-related protein 1B 0.0239598
WWOX WW domain containing oxidoreductase 0.0232599
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0228962
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0226657
TPI1 triosephosphate isomerase 1 0.0224223
MBNL2 muscleblind-like splicing regulator 2 0.0222669
RPL11 ribosomal protein L11 0.02217
KLRD1 killer cell lectin-like receptor subfamily D, member 1 0.0219457
FOXP1 forkhead box P1 0.0215771
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0211958
PDLIM5 PDZ and LIM domain 5 0.0211827
PMP22 peripheral myelin protein 22 0.0211044
RPS12 ribosomal protein S12 0.0210375
RPS15 ribosomal protein S15 0.0206194
B2M beta-2-microglobulin 0.0206155
MYPN myopalladin 0.0201298
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0200332
LPP LIM domain containing preferred translocation partner in lipoma 0.0199697
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.0198829
DSPP dentin sialophosphoprotein 0.0197914
PHF3 PHD finger protein 3 0.0195751
HOMER1 homer scaffolding protein 1 0.0192066
DNAH14 dynein, axonemal, heavy chain 14 0.0192003
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0186202
MED13 mediator complex subunit 13 0.0185623
ARID1B AT rich interactive domain 1B (SWI1-like) 0.0183758
CXADR coxsackie virus and adenovirus receptor 0.0179927
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) 0.0177654
TENM3 teneurin transmembrane protein 3 0.0176312
RPS8 ribosomal protein S8 0.0174817
PUM1 pumilio RNA-binding family member 1 0.0174484
NR4A3 nuclear receptor subfamily 4, group A, member 3 0.0174151
STAU1 staufen double-stranded RNA binding protein 1 0.0170619
CEP112 centrosomal protein 112kDa 0.0169796
USP9X ubiquitin specific peptidase 9, X-linked 0.0168704
BPTF bromodomain PHD finger transcription factor 0.0167975
TRIM37 tripartite motif containing 37 0.0167339
RPS25 ribosomal protein S25 0.0166184
FNDC3A fibronectin type III domain containing 3A 0.0165321
TM4SF1 transmembrane 4 L six family member 1 0.0160836
PLCB4 phospholipase C, beta 4 0.0160255
CD2AP CD2-associated protein 0.0159469
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) 0.0159393
RPS29 ribosomal protein S29 0.0155879
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0155031
RPL5 ribosomal protein L5 0.0153699
CHD1 chromodomain helicase DNA binding protein 1 0.0153129

decreased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 -0.254668
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.120883
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.108616
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0987456
EGR1 early growth response 1 -0.0947902
AFF3 AF4/FMR2 family, member 3 -0.0769361
THSD4 thrombospondin, type I, domain containing 4 -0.0757895
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0710754
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0680472
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.067261
RAD51B RAD51 paralog B -0.0668625
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0661188
COPA coatomer protein complex, subunit alpha -0.0635671
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 -0.0565391
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0564421
KDM2A lysine (K)-specific demethylase 2A -0.0556275
TPM3 tropomyosin 3 -0.0526096
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0521882
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0515533
HMGA2 high mobility group AT-hook 2 -0.0491458
MCL1 myeloid cell leukemia 1 -0.0477151
POTEF POTE ankyrin domain family, member F -0.0462253
MACF1 microtubule-actin crosslinking factor 1 -0.0454643
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0447868
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0438109
GOLGA4 golgin A4 -0.0419391
CCNL1 cyclin L1 -0.0418245
PDIA3 protein disulfide isomerase family A, member 3 -0.0405213
BBX bobby sox homolog (Drosophila) -0.0398682
ACTN1 actinin, alpha 1 -0.0388865
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0384541
BIRC6 baculoviral IAP repeat containing 6 -0.0381053
LMAN1 lectin, mannose-binding, 1 -0.0379548
RAB7A RAB7A, member RAS oncogene family -0.03792
SHANK2 SH3 and multiple ankyrin repeat domains 2 -0.0377582
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0375667
NUP58 nucleoporin 58 -0.0372121
FMNL2 formin-like 2 -0.0369266
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0360169
PTK2 protein tyrosine kinase 2 -0.0358964
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.0356936
SHB Src homology 2 domain containing adaptor protein B -0.0353987
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0353006
EML4 echinoderm microtubule associated protein like 4 -0.0345408
RSF1 remodeling and spacing factor 1 -0.034266
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0336849
WSB1 WD repeat and SOCS box containing 1 -0.0333634
GARS1 glycyl-tRNA synthetase 1 -0.0333414
EGFR epidermal growth factor receptor -0.0328815
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0326269
PRKCE protein kinase C, epsilon -0.0322653
RERE arginine-glutamic acid dipeptide (RE) repeats -0.032174
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0321585
MORF4L2 mortality factor 4 like 2 -0.0319786
RBM25 RNA binding motif protein 25 -0.0316359
CAMTA1 calmodulin binding transcription activator 1 -0.0311646
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0310207
MCTP1 multiple C2 domains, transmembrane 1 -0.0309563
YBX1 Y box binding protein 1 -0.0308659
PFN1 profilin 1 -0.0306795
WDR45B WD repeat domain 45B -0.0304313
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0302272
PDIA6 protein disulfide isomerase family A, member 6 -0.0302157
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) -0.0300226
CHD1L chromodomain helicase DNA binding protein 1-like -0.0300115
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 -0.0299721
KPNB1 karyopherin (importin) beta 1 -0.0298146
ARF4 ADP-ribosylation factor 4 -0.0296739
PKM pyruvate kinase, muscle -0.0296613
PYGL phosphorylase, glycogen, liver -0.0296592
MMP12 matrix metallopeptidase 12 -0.0294012
RYR3 ryanodine receptor 3 -0.0293611
SRP54 signal recognition particle 54kDa -0.0293583
TPM2 tropomyosin 2 (beta) -0.0286788
HELZ helicase with zinc finger -0.0282883
PHIP pleckstrin homology domain interacting protein -0.0281159
SRPK1 SRSF protein kinase 1 -0.0279875
NTSR1 neurotensin receptor 1 (high affinity) -0.0279195
ACBD3 acyl-CoA binding domain containing 3 -0.0275906
TMEM165 transmembrane protein 165 -0.0275454
STC1 stanniocalcin 1 -0.0274969
HM13 histocompatibility (minor) 13 -0.0270338
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0269052
MON2 MON2 homolog (S. cerevisiae) -0.0266942
NF1 neurofibromin 1 -0.0266187
CAMKMT calmodulin-lysine N-methyltransferase -0.0263726
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0263493
ICAM1 intercellular adhesion molecule 1 -0.0261109
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -0.0260809
HYOU1 hypoxia up-regulated 1 -0.0258859
ZNF292 zinc finger protein 292 -0.0257742
HDGF hepatoma-derived growth factor -0.0255741
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0255706
NBAS neuroblastoma amplified sequence -0.0254637
SF3B1 splicing factor 3b, subunit 1, 155kDa -0.0252507
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0252126
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 -0.0251361
CALR calreticulin -0.0251036
CSDE1 cold shock domain containing E1, RNA-binding -0.0250175
RNMT RNA (guanine-7-) methyltransferase -0.0249955