Bimiralisib_SNU-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bimiralisib perturbation in SNU-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bimiralisib_SNU-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PDE4B phosphodiesterase 4B, cAMP-specific 0.125282
ENOX1 ecto-NOX disulfide-thiol exchanger 1 0.123935
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.114822
VCL vinculin 0.0978907
PDGFC platelet derived growth factor C 0.0852707
SOX6 SRY (sex determining region Y)-box 6 0.0736184
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0731777
PDE4D phosphodiesterase 4D, cAMP-specific 0.0688814
EGFR epidermal growth factor receptor 0.0650532
ZNF608 zinc finger protein 608 0.06435
HDAC9 histone deacetylase 9 0.0640902
ZEB1 zinc finger E-box binding homeobox 1 0.0604941
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0586223
EZR ezrin 0.0559309
GLI3 GLI family zinc finger 3 0.0540761
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.0533827
NCEH1 neutral cholesterol ester hydrolase 1 0.0532472
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 0.0504664
RPL26 ribosomal protein L26 0.0492969
PRELID2 PRELI domain containing 2 0.0457873
TJP1 tight junction protein 1 0.0426109
MYO5C myosin VC 0.0424195
HSPB1 heat shock 27kDa protein 1 0.0408157
ANXA1 annexin A1 0.040815
RPS8 ribosomal protein S8 0.0402345
BMP2K BMP2 inducible kinase 0.0390827
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0384731
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0382092
NBEA neurobeachin 0.0378835
RPS2 ribosomal protein S2 0.0364438
DLG1 discs, large homolog 1 (Drosophila) 0.0360406
FOXP1 forkhead box P1 0.0355791
TSC22D1 TSC22 domain family, member 1 0.0340095
SPATS2L spermatogenesis associated, serine-rich 2-like 0.0333577
TM4SF1 transmembrane 4 L six family member 1 0.0332244
RBMS3 RNA binding motif, single stranded interacting protein 3 0.0325666
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0311367
RPL18 ribosomal protein L18 0.0297837
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0295824
H1-4 H1.4 linker histone, cluster member 0.0295364
EML4 echinoderm microtubule associated protein like 4 0.0289019
RPL7 ribosomal protein L7 0.0282208
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.027651
MBNL2 muscleblind-like splicing regulator 2 0.0274113
GALNT5 polypeptide N-acetylgalactosaminyltransferase 5 0.0271043
CSNK1A1 casein kinase 1, alpha 1 0.0268792
RPL12 ribosomal protein L12 0.0268743
PLK2 polo-like kinase 2 0.0267772
PYGB phosphorylase, glycogen; brain 0.026356
TMCO3 transmembrane and coiled-coil domains 3 0.0263193
RIPOR2 RHO family interacting cell polarization regulator 2 0.0260204
AHNAK AHNAK nucleoprotein 0.0259964
SDK1 sidekick cell adhesion molecule 1 0.0259551
RPS6 ribosomal protein S6 0.0255
TRIM24 tripartite motif containing 24 0.0253238
SERPINB6 serpin peptidase inhibitor, clade B (ovalbumin), member 6 0.0251302
NUP153 nucleoporin 153kDa 0.0249405
CAVIN2 caveolae associated protein 2 0.0248573
RPS12 ribosomal protein S12 0.0244115
ARHGAP5 Rho GTPase activating protein 5 0.0243073
TASOR2 transcription activation suppressor family member 2 0.0240192
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0240028
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 0.0238845
ZNF638 zinc finger protein 638 0.023761
VMP1 vacuole membrane protein 1 0.0234468
DUSP4 dual specificity phosphatase 4 0.0234049
BCKDHB branched chain keto acid dehydrogenase E1, beta polypeptide 0.0233272
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) 0.0230634
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0223715
JMJD1C jumonji domain containing 1C 0.0223131
CAMTA1 calmodulin binding transcription activator 1 0.0222945
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase 0.0222444
GLI2 GLI family zinc finger 2 0.0222118
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.0221001
ZNF217 zinc finger protein 217 0.0216811
TMEM65 transmembrane protein 65 0.0214188
SSBP2 single-stranded DNA binding protein 2 0.0213421
ARID1A AT rich interactive domain 1A (SWI-like) 0.0212609
XKR6 XK, Kell blood group complex subunit-related family, member 6 0.021188
NFE2L1 nuclear factor, erythroid 2-like 1 0.0210824
RPLP2 ribosomal protein, large, P2 0.0208692
ATP6V0A1 ATPase, H+ transporting, lysosomal V0 subunit a1 0.0206997
ALDH1A2 aldehyde dehydrogenase 1 family, member A2 0.0205946
RPL32 ribosomal protein L32 0.0204529
PTTG1IP pituitary tumor-transforming 1 interacting protein 0.0203402
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0201391
XRN1 5'-3' exoribonuclease 1 0.0200217
FAM91A1 family with sequence similarity 91, member A1 0.0198846
TGFBR3 transforming growth factor, beta receptor III 0.0197756
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0197527
MLIP muscular LMNA-interacting protein 0.0196654
CAMK1D calcium/calmodulin-dependent protein kinase ID 0.0195661
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0194542
RFX3 regulatory factor X, 3 (influences HLA class II expression) 0.019411
MXI1 MAX interactor 1, dimerization protein 0.0193932
RPL21 ribosomal protein L21 0.0193012
ARL4C ADP-ribosylation factor-like 4C 0.0189629
SENP5 SUMO1/sentrin specific peptidase 5 0.0187686
RACK1 receptor for activated C kinase 1 0.0186448
FER1L6 fer-1-like family member 6 0.0186065

decreased expression

Symbol Name Standardized Value
PTMA prothymosin, alpha -0.267856
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.118154
PKM pyruvate kinase, muscle -0.100282
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0856992
RPL35A ribosomal protein L35a -0.0836027
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0709751
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0702544
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0671851
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0622508
RBM39 RNA binding motif protein 39 -0.0598897
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0571176
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0532535
POTEF POTE ankyrin domain family, member F -0.0474718
PFN1 profilin 1 -0.0474417
S100A6 S100 calcium binding protein A6 -0.0463539
CPED1 cadherin-like and PC-esterase domain containing 1 -0.0452347
EIF4A2 eukaryotic translation initiation factor 4A2 -0.0437516
FHIT fragile histidine triad -0.0425131
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0422509
VIM vimentin -0.0419706
RPL9 ribosomal protein L9 -0.0413691
DIAPH3 diaphanous-related formin 3 -0.0413106
WDR45B WD repeat domain 45B -0.0412881
ACTG1 actin gamma 1 -0.0407769
PRDX2 peroxiredoxin 2 -0.0406934
TMSB10 thymosin beta 10 -0.039431
FTL ferritin, light polypeptide -0.0386747
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0381011
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0380795
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0375594
ATP5F1B ATP synthase F1 subunit beta -0.0370265
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0362506
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0361616
MED13L mediator complex subunit 13-like -0.0351584
TMSB4X thymosin beta 4, X-linked -0.0342636
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.0335705
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0332554
ADAM9 ADAM metallopeptidase domain 9 -0.0329336
NAMPT nicotinamide phosphoribosyltransferase -0.0325878
SMC3 structural maintenance of chromosomes 3 -0.0324743
NDRG1 N-myc downstream regulated 1 -0.0311624
RPL13A ribosomal protein L13a -0.0311525
PDIA3 protein disulfide isomerase family A, member 3 -0.0306671
CAMK2D calcium/calmodulin-dependent protein kinase II delta -0.0305812
N4BP2L2 NEDD4 binding protein 2-like 2 -0.0305161
BIRC6 baculoviral IAP repeat containing 6 -0.0301543
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0299673
KPNB1 karyopherin (importin) beta 1 -0.0298545
FKBP10 FK506 binding protein 10, 65 kDa -0.0298146
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.029574
ZBTB20 zinc finger and BTB domain containing 20 -0.0288535
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0288466
UBE2D3 ubiquitin-conjugating enzyme E2D 3 -0.0283895
EEF2 eukaryotic translation elongation factor 2 -0.0283386
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0283141
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) -0.0282268
TPT1 tumor protein, translationally-controlled 1 -0.0274496
RPL27A ribosomal protein L27a -0.0274276
HLA-B major histocompatibility complex, class I, B -0.0266079
RAB7A RAB7A, member RAS oncogene family -0.0265999
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0265846
HLA-E major histocompatibility complex, class I, E -0.0265728
SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 -0.0265447
LOC112694756 uncharaterized LOC112694756 -0.0262469
HNRNPK heterogeneous nuclear ribonucleoprotein K -0.0259842
KDM3A lysine (K)-specific demethylase 3A -0.0257236
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0255642
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.0255109
ZMYND8 zinc finger, MYND-type containing 8 -0.0255091
GNPDA1 glucosamine-6-phosphate deaminase 1 -0.0254983
SRP54 signal recognition particle 54kDa -0.0254522
TNRC6B trinucleotide repeat containing 6B -0.0249475
SS18 synovial sarcoma translocation, chromosome 18 -0.0249435
DARS1 aspartyl-tRNA synthetase 1 -0.0246793
CCNL1 cyclin L1 -0.0243281
GNAS GNAS complex locus -0.0242683
GOLGA4 golgin A4 -0.0239899
NF1 neurofibromin 1 -0.0239334
PCBP2 poly(rC) binding protein 2 -0.0238254
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0237372
SEC31A SEC31 homolog A (S. cerevisiae) -0.0236484
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0236007
EVI5 ecotropic viral integration site 5 -0.0235107
MORF4L1 mortality factor 4 like 1 -0.0235102
RPS19 ribosomal protein S19 -0.0233874
LOC102724023 ES1 protein homolog, mitochondrial -0.0233835
STAG2 stromal antigen 2 -0.0233152
ZNF207 zinc finger protein 207 -0.0233117
BAZ2A bromodomain adjacent to zinc finger domain, 2A -0.0229884
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0229163
SREBF2 sterol regulatory element binding transcription factor 2 -0.0224435
CRPPA CDP-L-ribitol pyrophosphorylase A -0.0223469
FUBP1 far upstream element (FUSE) binding protein 1 -0.022309
ADAM17 ADAM metallopeptidase domain 17 -0.0220808
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0218514
ELOVL5 ELOVL fatty acid elongase 5 -0.0217526
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0215789
ASXL1 additional sex combs like transcriptional regulator 1 -0.0215654
MEF2A myocyte enhancer factor 2A -0.02153
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.02137