Binimetinib_COLO 205 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Binimetinib perturbation in COLO 205 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Binimetinib_COLO 205 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MACC1 metastasis associated in colon cancer 1 0.140013
MUC13 mucin 13, cell surface associated 0.135709
DSCAM Down syndrome cell adhesion molecule 0.0947289
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0912956
EPS8 epidermal growth factor receptor pathway substrate 8 0.0876138
STK24 serine/threonine kinase 24 0.0831403
ST14 suppression of tumorigenicity 14 (colon carcinoma) 0.0822944
MYO1E myosin IE 0.0785182
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0756109
AKAP13 A kinase (PRKA) anchor protein 13 0.074701
LMO7 LIM domain 7 0.0732681
RNF213 ring finger protein 213 0.0729038
DSPP dentin sialophosphoprotein 0.0692352
KLF5 Kruppel-like factor 5 (intestinal) 0.067701
ATP10B ATPase, class V, type 10B 0.065718
B2M beta-2-microglobulin 0.0641991
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 0.0627423
ENO1 enolase 1, (alpha) 0.0616117
SERINC5 serine incorporator 5 0.060856
CATSPERB catsper channel auxiliary subunit beta 0.0592571
PDZD8 PDZ domain containing 8 0.0582026
UBE2H ubiquitin-conjugating enzyme E2H 0.0566092
OCLN occludin 0.0564122
ETV6 ets variant 6 0.055688
TSC22D1 TSC22 domain family, member 1 0.0553994
FHL2 four and a half LIM domains 2 0.0529185
EXT1 exostosin glycosyltransferase 1 0.0526571
N4BP2L2 NEDD4 binding protein 2-like 2 0.0522654
DST dystonin 0.0513216
CDHR2 cadherin-related family member 2 0.0503343
JUN jun proto-oncogene 0.0497033
SPATS2L spermatogenesis associated, serine-rich 2-like 0.0490341
VMP1 vacuole membrane protein 1 0.0489751
RAB11FIP1 RAB11 family interacting protein 1 (class I) 0.0489434
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0474926
NAMPT nicotinamide phosphoribosyltransferase 0.0471737
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0461709
ZNF292 zinc finger protein 292 0.0460373
LCN2 lipocalin 2 0.045421
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.044551
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0432143
TRIM2 tripartite motif containing 2 0.0427418
EPSTI1 epithelial stromal interaction 1 (breast) 0.0424822
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.0424463
TMC5 transmembrane channel-like 5 0.0418593
TUFT1 tuftelin 1 0.0415344
TXNIP thioredoxin interacting protein 0.0410609
GCLC glutamate-cysteine ligase, catalytic subunit 0.0403158
DPP4 dipeptidyl-peptidase 4 0.039816
LPP LIM domain containing preferred translocation partner in lipoma 0.0391058
AHNAK AHNAK nucleoprotein 0.0390245
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 0.0382522
CREB3L2 cAMP responsive element binding protein 3-like 2 0.0381361
FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 0.0375153
HS2ST1 heparan sulfate 2-O-sulfotransferase 1 0.0372517
CTNND1 catenin (cadherin-associated protein), delta 1 0.0370685
FAT1 FAT atypical cadherin 1 0.0370543
DUSP10 dual specificity phosphatase 10 0.0368749
MYH9 myosin, heavy chain 9, non-muscle 0.0364745
LURAP1L leucine rich adaptor protein 1-like 0.0363691
MX1 MX dynamin-like GTPase 1 0.0360116
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0349894
YAP1 Yes-associated protein 1 0.0345733
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.0342649
MAN1A1 mannosidase, alpha, class 1A, member 1 0.0340778
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0337759
PRELID2 PRELI domain containing 2 0.0335143
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.033238
TJP1 tight junction protein 1 0.0331933
CEMIP2 cell migration inducing hyaluronidase 2 0.0327454
ATP9A ATPase, class II, type 9A 0.0324712
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 0.0323741
KIF16B kinesin family member 16B 0.0321082
VEGFA vascular endothelial growth factor A 0.0317833
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0317095
ELOF1 elongation factor 1 homolog (S. cerevisiae) 0.0310755
ITM2B integral membrane protein 2B 0.0308911
MLPH melanophilin 0.0307751
MYO5B myosin VB 0.0307134
ADAR adenosine deaminase, RNA-specific 0.0306537
PRSS23 protease, serine, 23 0.0305363
KLF3 Kruppel-like factor 3 (basic) 0.0302534
KLF6 Kruppel-like factor 6 0.0296794
LIMA1 LIM domain and actin binding 1 0.0296705
RBM47 RNA binding motif protein 47 0.0296069
GPBP1 GC-rich promoter binding protein 1 0.0286533
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.0284581
ERN1 endoplasmic reticulum to nucleus signaling 1 0.0283331
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0280025
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0279675
PGK1 phosphoglycerate kinase 1 0.027845
ANXA4 annexin A4 0.0276658
MAP3K1 mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase 0.027408
MTUS1 microtubule associated tumor suppressor 1 0.0273876
SIK3 SIK family kinase 3 0.0271769
MCL1 myeloid cell leukemia 1 0.0270015
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0267028
MX2 MX dynamin-like GTPase 2 0.0266156
USP12 ubiquitin specific peptidase 12 0.0265463
USP54 ubiquitin specific peptidase 54 0.0265245

decreased expression

Symbol Name Standardized Value
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 -0.245839
TPT1 tumor protein, translationally-controlled 1 -0.1223
EGR1 early growth response 1 -0.107617
GMDS GDP-mannose 4,6-dehydratase -0.105759
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.105729
H1-0 H1.0 linker histone -0.0964053
ZMYND8 zinc finger, MYND-type containing 8 -0.0928999
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0853655
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 -0.0825045
RUNX1 runt-related transcription factor 1 -0.0797739
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0685671
ATP11A ATPase, class VI, type 11A -0.0673848
ANKRD10 ankyrin repeat domain 10 -0.066306
ITGA6 integrin, alpha 6 -0.0662844
XAF1 XIAP associated factor 1 -0.0645073
RAB7A RAB7A, member RAS oncogene family -0.0627101
TNS4 tensin 4 -0.0594183
SPRED1 sprouty-related, EVH1 domain containing 1 -0.0550581
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0546659
SAMD4A sterile alpha motif domain containing 4A -0.0533175
NF1 neurofibromin 1 -0.0517478
MAP7 microtubule-associated protein 7 -0.0513141
RPS6 ribosomal protein S6 -0.0511595
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0500653
AHI1 Abelson helper integration site 1 -0.0497833
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0495758
SQSTM1 sequestosome 1 -0.0469164
WSB1 WD repeat and SOCS box containing 1 -0.0456569
ARF1 ADP-ribosylation factor 1 -0.0452804
UFM1 ubiquitin-fold modifier 1 -0.0450238
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0440124
SPATA13 spermatogenesis associated 13 -0.0437734
LOC102724023 ES1 protein homolog, mitochondrial -0.0434866
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 -0.0413207
MCTP1 multiple C2 domains, transmembrane 1 -0.0409577
CBFA2T2 core-binding factor, runt domain, alpha subunit 2; translocated to, 2 -0.0406284
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0406244
RRBP1 ribosome binding protein 1 -0.0403813
ABLIM1 actin binding LIM protein 1 -0.0403361
IRF1 interferon regulatory factor 1 -0.040054
LYZ lysozyme -0.0392726
HM13 histocompatibility (minor) 13 -0.0390215
PARP4 poly (ADP-ribose) polymerase family, member 4 -0.0387074
PIBF1 progesterone immunomodulatory binding factor 1 -0.0381992
HDAC4 histone deacetylase 4 -0.0379263
ZMYM2 zinc finger, MYM-type 2 -0.0378158
NKD1 naked cuticle homolog 1 (Drosophila) -0.0376896
PATJ PATJ crumbs cell polarity complex component -0.0364386
RPL34 ribosomal protein L34 -0.0357136
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0356707
RPL7L1 ribosomal protein L7-like 1 -0.0349571
MAP3K5 mitogen-activated protein kinase kinase kinase 5 -0.034934
HLA-B major histocompatibility complex, class I, B -0.0346753
GNAS GNAS complex locus -0.0343778
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0337673
NPSR1 neuropeptide S receptor 1 -0.0336247
TTC3 tetratricopeptide repeat domain 3 -0.0334831
STAU1 staufen double-stranded RNA binding protein 1 -0.033161
MORF4L2 mortality factor 4 like 2 -0.0328292
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0325632
PERP PERP, TP53 apoptosis effector -0.0324341
UBR1 ubiquitin protein ligase E3 component n-recognin 1 -0.0317297
NCOR1 nuclear receptor corepressor 1 -0.0312767
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0312103
RHOBTB3 Rho-related BTB domain containing 3 -0.0311882
DIS3 DIS3 exosome endoribonuclease and 3'-5' exoribonuclease -0.0311192
MARCHF6 membrane associated ring-CH-type finger 6 -0.0308209
RIGI RNA sensor RIG-I -0.0303613
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0301243
MAML2 mastermind-like 2 (Drosophila) -0.0297752
PRKCA protein kinase C, alpha -0.0292459
NPAS2 neuronal PAS domain protein 2 -0.0292
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.0291019
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 -0.0287286
HMGB1 high mobility group box 1 -0.0283187
SLC38A2 solute carrier family 38, member 2 -0.0283108
CDK6 cyclin-dependent kinase 6 -0.0281933
MSI2 musashi RNA-binding protein 2 -0.0278028
PTMA prothymosin, alpha -0.0277793
PCED1B PC-esterase domain containing 1B -0.0277176
TMEM87A transmembrane protein 87A -0.0276751
AGO2 argonaute RISC catalytic component 2 -0.0276479
INTS6 integrator complex subunit 6 -0.0276206
THOC2 THO complex 2 -0.0276198
LCORL ligand dependent nuclear receptor corepressor-like -0.0274726
PMM2 phosphomannomutase 2 -0.0274607
AGR2 anterior gradient 2 -0.0273548
PDIA3 protein disulfide isomerase family A, member 3 -0.0271877
FUS FUS RNA binding protein -0.0271436
MKI67 marker of proliferation Ki-67 -0.0270808
PPP1R12A protein phosphatase 1, regulatory subunit 12A -0.0269921
WDR45B WD repeat domain 45B -0.0267729
SPRED2 sprouty-related, EVH1 domain containing 2 -0.0267463
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 -0.026199
VOPP1 vesicular, overexpressed in cancer, prosurvival protein 1 -0.0259368
MPHOSPH8 M-phase phosphoprotein 8 -0.0257766
GOLGB1 golgin B1 -0.0257386
PLSCR1 phospholipid scramblase 1 -0.0256825
MUC20 mucin 20, cell surface associated -0.0253525
UBR2 ubiquitin protein ligase E3 component n-recognin 2 -0.0253434