Binimetinib_NCI-H596 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Binimetinib perturbation in NCI-H596 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Binimetinib_NCI-H596 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.157558
DSPP dentin sialophosphoprotein 0.126104
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.122018
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.121272
POTEF POTE ankyrin domain family, member F 0.109945
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.109769
DSCAM Down syndrome cell adhesion molecule 0.106381
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.104637
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.104083
COL1A2 collagen, type I, alpha 2 0.0982393
PRELID2 PRELI domain containing 2 0.0971735
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0925095
EEF2 eukaryotic translation elongation factor 2 0.0906629
INHBA inhibin, beta A 0.0901181
TNS3 tensin 3 0.0872801
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0772576
NAP1L1 nucleosome assembly protein 1-like 1 0.0763232
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0754137
FNIP1 folliculin interacting protein 1 0.0741727
TTC3 tetratricopeptide repeat domain 3 0.0735011
ENO1 enolase 1, (alpha) 0.0707479
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0702528
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0696396
PTEN phosphatase and tensin homolog 0.0693132
TXNRD1 thioredoxin reductase 1 0.0688119
ANKRD12 ankyrin repeat domain 12 0.0666787
PCBP2 poly(rC) binding protein 2 0.0662551
SCAF11 SR-related CTD-associated factor 11 0.0661968
YBX1 Y box binding protein 1 0.0639674
PICALM phosphatidylinositol binding clathrin assembly protein 0.0635284
CAVIN1 caveolae associated protein 1 0.062908
ATRX alpha thalassemia/mental retardation syndrome X-linked 0.0600011
ZNF292 zinc finger protein 292 0.0596692
WAC WW domain containing adaptor with coiled-coil 0.057454
VEGFA vascular endothelial growth factor A 0.0565554
RAB1A RAB1A, member RAS oncogene family 0.0562871
ENO2 enolase 2 (gamma, neuronal) 0.056013
CALR calreticulin 0.0549728
IGFBP5 insulin-like growth factor binding protein 5 0.0547724
RNF213 ring finger protein 213 0.054574
KMT2E lysine (K)-specific methyltransferase 2E 0.0545181
LPP LIM domain containing preferred translocation partner in lipoma 0.0542903
RABGAP1L RAB GTPase activating protein 1-like 0.0536067
RERE arginine-glutamic acid dipeptide (RE) repeats 0.052095
JMJD1C jumonji domain containing 1C 0.0510503
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0510413
MBD5 methyl-CpG binding domain protein 5 0.0507843
RPS3 ribosomal protein S3 0.0491342
RPS12 ribosomal protein S12 0.0489632
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase 0.0485843
USP34 ubiquitin specific peptidase 34 0.0481338
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0465972
AKAP9 A kinase (PRKA) anchor protein 9 0.0450535
PTK2 protein tyrosine kinase 2 0.0450212
RUNX1 runt-related transcription factor 1 0.0448189
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 0.0447172
RBM15 RNA binding motif protein 15 0.0442968
APLP2 amyloid beta (A4) precursor-like protein 2 0.0437517
CSDE1 cold shock domain containing E1, RNA-binding 0.043488
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0429357
COL5A2 collagen, type V, alpha 2 0.0427345
SBF2 SET binding factor 2 0.0414604
RPS27A ribosomal protein S27a 0.0413644
LMNA lamin A/C 0.0412343
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0402674
TSC22D1 TSC22 domain family, member 1 0.0397632
EHBP1 EH domain binding protein 1 0.0396657
MYH9 myosin, heavy chain 9, non-muscle 0.0394215
SP100 SP100 nuclear antigen 0.0391725
SBNO1 strawberry notch homolog 1 (Drosophila) 0.0389674
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) 0.038928
STAG2 stromal antigen 2 0.0383251
GOLGB1 golgin B1 0.0379412
JARID2 jumonji, AT rich interactive domain 2 0.0378059
P4HB prolyl 4-hydroxylase, beta polypeptide 0.037685
EXOC4 exocyst complex component 4 0.0372301
PTGES3 prostaglandin E synthase 3 (cytosolic) 0.0370848
AKAP12 A kinase (PRKA) anchor protein 12 0.0359647
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) 0.0355289
EPS8 epidermal growth factor receptor pathway substrate 8 0.0352631
CALU calumenin 0.0349228
TBC1D22A TBC1 domain family, member 22A 0.0346025
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0345838
MYO1E myosin IE 0.0343966
CDC42BPB CDC42 binding protein kinase beta (DMPK-like) 0.0340087
LMO7 LIM domain 7 0.033689
HSPB1 heat shock 27kDa protein 1 0.0332601
LIMCH1 LIM and calponin homology domains 1 0.0329817
BIRC6 baculoviral IAP repeat containing 6 0.0323231
SEC63 SEC63 homolog (S. cerevisiae) 0.0321452
C6ORF62 chromosome 6 open reading frame 62 0.0316329
SPAG9 sperm associated antigen 9 0.0315608
EZR ezrin 0.031047
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0305529
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 0.0303812
TRIP12 thyroid hormone receptor interactor 12 0.0297372
RPLP0 ribosomal protein, large, P0 0.0296738
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0295077
ARID5B AT rich interactive domain 5B (MRF1-like) 0.02945
SRP14 signal recognition particle 14kDa (homologous Alu RNA binding protein) 0.0294095

decreased expression

Symbol Name Standardized Value
IGFBP3 insulin-like growth factor binding protein 3 -0.210533
NAV2 neuron navigator 2 -0.112451
EFNA5 ephrin-A5 -0.109404
EXT1 exostosin glycosyltransferase 1 -0.109332
DST dystonin -0.106236
CXCL8 chemokine (C-X-C motif) ligand 8 -0.099781
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0966798
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0947955
MT2A metallothionein 2A -0.0909594
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0885461
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0851726
PDE4D phosphodiesterase 4D, cAMP-specific -0.0849393
PDE10A phosphodiesterase 10A -0.0844206
CDH13 cadherin 13 -0.0834099
WSB1 WD repeat and SOCS box containing 1 -0.0812102
ELL2 elongation factor, RNA polymerase II, 2 -0.0807265
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0779252
VMP1 vacuole membrane protein 1 -0.0704918
NKD1 naked cuticle homolog 1 (Drosophila) -0.0698949
MCL1 myeloid cell leukemia 1 -0.0674634
CANX calnexin -0.0659289
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0640945
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0612392
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 -0.0609566
EGR1 early growth response 1 -0.0607081
LOC112694756 uncharaterized LOC112694756 -0.0556978
NPAS2 neuronal PAS domain protein 2 -0.0556027
OGA O-GlcNAcase -0.0545407
RPLP1 ribosomal protein, large, P1 -0.0538055
CDKAL1 CDK5 regulatory subunit associated protein 1-like 1 -0.0531177
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0524226
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0518124
PRKCA protein kinase C, alpha -0.0513026
MAML3 mastermind-like 3 (Drosophila) -0.0512491
VCL vinculin -0.0512357
FLNB filamin B, beta -0.0508709
NAMPT nicotinamide phosphoribosyltransferase -0.0508578
PSD3 pleckstrin and Sec7 domain containing 3 -0.0505794
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase -0.0504352
DIAPH2 diaphanous-related formin 2 -0.0499729
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0490457
SEC31A SEC31 homolog A (S. cerevisiae) -0.0485179
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0484276
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0483896
FNDC3A fibronectin type III domain containing 3A -0.0477943
ANKRD11 ankyrin repeat domain 11 -0.0469726
HMGA2 high mobility group AT-hook 2 -0.0468608
MAML2 mastermind-like 2 (Drosophila) -0.0462856
GPC6 glypican 6 -0.0459302
B2M beta-2-microglobulin -0.0447325
HELZ helicase with zinc finger -0.0447216
NHSL1 NHS-like 1 -0.044666
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0444098
FN1 fibronectin 1 -0.0444008
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 -0.0437905
ZBTB20 zinc finger and BTB domain containing 20 -0.0432412
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) -0.0431999
LAMB3 laminin, beta 3 -0.0429454
EPB41L3 erythrocyte membrane protein band 4.1-like 3 -0.041994
ERGIC1 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 -0.0414052
DTNA dystrobrevin, alpha -0.0403913
CCNI cyclin I -0.0402
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 -0.0390465
EIF1 eukaryotic translation initiation factor 1 -0.0382387
ZMYND8 zinc finger, MYND-type containing 8 -0.0380273
NCOR1 nuclear receptor corepressor 1 -0.0372862
PDIA3 protein disulfide isomerase family A, member 3 -0.0372788
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0371338
RBM25 RNA binding motif protein 25 -0.0367646
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0363795
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0353986
MARCHF6 membrane associated ring-CH-type finger 6 -0.0352908
NALF1 NALCN channel auxiliary factor 1 -0.0351635
RPL19 ribosomal protein L19 -0.0349986
NSMCE2 non-SMC element 2, MMS21 homolog (S. cerevisiae) -0.0348953
ADARB2 adenosine deaminase, RNA-specific, B2 (non-functional) -0.0348198
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0342295
PHF21A PHD finger protein 21A -0.0339419
ANKRD17 ankyrin repeat domain 17 -0.0338726
SMYD3 SET and MYND domain containing 3 -0.0330696
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) -0.0324202
DOCK4 dedicator of cytokinesis 4 -0.0321121
BAZ2B bromodomain adjacent to zinc finger domain, 2B -0.0317748
PRRC2B proline-rich coiled-coil 2B -0.0316496
ZFAND3 zinc finger, AN1-type domain 3 -0.0316189
RPL35A ribosomal protein L35a -0.0311681
RORA RAR-related orphan receptor A -0.0310483
EGFR epidermal growth factor receptor -0.0308711
RTN4 reticulon 4 -0.0301593
AKAP13 A kinase (PRKA) anchor protein 13 -0.030114
FTL ferritin, light polypeptide -0.0301049
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.029198
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0290296
ACTG1 actin gamma 1 -0.0285511
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.0282476
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.0278626
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0278585
RB1CC1 RB1-inducible coiled-coil 1 -0.0278266
GRIK1 glutamate receptor, ionotropic, kainate 1 -0.027417
CHD9 chromodomain helicase DNA binding protein 9 -0.0273943