Binimetinib_SW 1271 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Binimetinib perturbation in SW 1271 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Binimetinib_SW 1271 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
IGFBP3 insulin-like growth factor binding protein 3 0.175168
LDHA lactate dehydrogenase A 0.105785
ANXA2 annexin A2 0.0911863
DSCAM Down syndrome cell adhesion molecule 0.0781655
PTMA prothymosin, alpha 0.076902
ENO1 enolase 1, (alpha) 0.0740511
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0709448
ANXA1 annexin A1 0.0693623
CANX calnexin 0.0613996
POTEF POTE ankyrin domain family, member F 0.060759
TXNRD1 thioredoxin reductase 1 0.0607104
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.058252
MAP1B microtubule-associated protein 1B 0.0563342
AHNAK AHNAK nucleoprotein 0.0555388
MBNL2 muscleblind-like splicing regulator 2 0.0555322
ACTG1 actin gamma 1 0.0546029
ZSWIM6 zinc finger, SWIM-type containing 6 0.0524235
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0511497
DST dystonin 0.0506366
APLP2 amyloid beta (A4) precursor-like protein 2 0.0504902
MAP3K20 mitogen-activated protein kinase kinase kinase 20 0.0496453
CALR calreticulin 0.0491289
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0490837
EEF2 eukaryotic translation elongation factor 2 0.0490169
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0489684
ENO2 enolase 2 (gamma, neuronal) 0.0482369
HILPDA hypoxia inducible lipid droplet-associated 0.0481828
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0473213
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0454028
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0441693
RPL4 ribosomal protein L4 0.0434835
MYOF myoferlin 0.0430498
RNF213 ring finger protein 213 0.0412196
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0406467
CLIP1 CAP-GLY domain containing linker protein 1 0.0402556
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0401876
UBC ubiquitin C 0.0392139
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.0389287
EIF4B eukaryotic translation initiation factor 4B 0.0381581
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0378999
TXNIP thioredoxin interacting protein 0.0378666
EIF4A1 eukaryotic translation initiation factor 4A1 0.0362211
EIF1 eukaryotic translation initiation factor 1 0.0360268
MYH9 myosin, heavy chain 9, non-muscle 0.0356968
BZW1 basic leucine zipper and W2 domains 1 0.0346662
HDLBP high density lipoprotein binding protein 0.0341772
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0334059
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.0329433
PHF3 PHD finger protein 3 0.0326021
NR4A3 nuclear receptor subfamily 4, group A, member 3 0.0319499
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0315682
PKM pyruvate kinase, muscle 0.0314398
INTS6 integrator complex subunit 6 0.0313194
FNIP1 folliculin interacting protein 1 0.0305198
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0303656
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.029794
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0292421
NAMPT nicotinamide phosphoribosyltransferase 0.0291892
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0284792
SQSTM1 sequestosome 1 0.0284715
PTEN phosphatase and tensin homolog 0.0284598
CEP250 centrosomal protein 250kDa 0.0284195
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0279736
INSIG1 insulin induced gene 1 0.0276362
PCBP2 poly(rC) binding protein 2 0.027562
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.0268568
SET SET nuclear proto-oncogene 0.0266897
HNRNPR heterogeneous nuclear ribonucleoprotein R 0.0266823
WWOX WW domain containing oxidoreductase 0.0263667
CREBBP CREB binding protein 0.0263459
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide 0.0263243
SIK3 SIK family kinase 3 0.0260928
ANP32A acidic (leucine-rich) nuclear phosphoprotein 32 family, member A 0.0260724
JMJD1C jumonji domain containing 1C 0.0259795
AFDN afadin, adherens junction formation factor 0.0257233
NEK1 NIMA-related kinase 1 0.0256564
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0256299
ERGIC3 ERGIC and golgi 3 0.0255238
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0251144
IQGAP1 IQ motif containing GTPase activating protein 1 0.0250756
AHR aryl hydrocarbon receptor 0.0246726
TOP2B topoisomerase (DNA) II beta 180kDa 0.02464
DMXL1 Dmx-like 1 0.0243712
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0243652
LATS2 large tumor suppressor kinase 2 0.0242896
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0239673
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like 0.0239619
PALS1 protein associated with LIN7 1, MAGUK p55 family member 0.0237823
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) 0.0234922
SOD2 superoxide dismutase 2, mitochondrial 0.0232833
PEAK1 pseudopodium-enriched atypical kinase 1 0.0231393
UTRN utrophin 0.0230801
YBX1 Y box binding protein 1 0.0230253
TRIO trio Rho guanine nucleotide exchange factor 0.0229234
ARCN1 archain 1 0.0224193
CUX1 cut-like homeobox 1 0.0224133
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0222904
CREBRF CREB3 regulatory factor 0.0221153
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0220576
SFTPA2 surfactant protein A2 0.0219566

decreased expression

Symbol Name Standardized Value
PALM2AKAP2 PALM2 and AKAP2 fusion -0.11171
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.100714
MT2A metallothionein 2A -0.0916576
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0863327
FMNL2 formin-like 2 -0.0831543
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0761456
MACF1 microtubule-actin crosslinking factor 1 -0.0726884
THSD4 thrombospondin, type I, domain containing 4 -0.0684868
FNDC3B fibronectin type III domain containing 3B -0.0677213
NF1 neurofibromin 1 -0.0644547
NT5E 5'-nucleotidase, ecto (CD73) -0.0632627
BIRC3 baculoviral IAP repeat containing 3 -0.0625646
SNX14 sorting nexin 14 -0.0623617
MCTP1 multiple C2 domains, transmembrane 1 -0.0610495
CD44 CD44 molecule (Indian blood group) -0.0606749
AKAP13 A kinase (PRKA) anchor protein 13 -0.0603173
TAS2R14 taste receptor, type 2, member 14 -0.0597912
AKAP12 A kinase (PRKA) anchor protein 12 -0.0589817
CDCP1 CUB domain containing protein 1 -0.057906
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.0562876
PDE8A phosphodiesterase 8A -0.0561091
FLNB filamin B, beta -0.0557269
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.055539
GOLGA4 golgin A4 -0.0554703
TMSB10 thymosin beta 10 -0.0554328
DOCK4 dedicator of cytokinesis 4 -0.0552818
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0545595
MAP3K5 mitogen-activated protein kinase kinase kinase 5 -0.0542122
DNER delta/notch-like EGF repeat containing -0.0531936
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0529015
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0525693
RBM39 RNA binding motif protein 39 -0.052402
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) -0.0523519
YBX3 Y box binding protein 3 -0.0518721
TM4SF1 transmembrane 4 L six family member 1 -0.0517761
MAPKAP1 mitogen-activated protein kinase associated protein 1 -0.0515883
OSMR oncostatin M receptor -0.0513664
SPAG9 sperm associated antigen 9 -0.0510055
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats -0.0494348
HMGA2 high mobility group AT-hook 2 -0.0493241
ATG7 autophagy related 7 -0.0491995
ETV1 ets variant 1 -0.0490636
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 -0.0488167
PDE4D phosphodiesterase 4D, cAMP-specific -0.0484496
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.048418
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.0469947
PNISR PNN-interacting serine/arginine-rich protein -0.0463255
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0461406
RIGI RNA sensor RIG-I -0.045776
AKAP10 A kinase (PRKA) anchor protein 10 -0.0454738
TPX2 TPX2, microtubule-associated -0.0445795
RIN2 Ras and Rab interactor 2 -0.0439519
VIM vimentin -0.0437297
TPT1 tumor protein, translationally-controlled 1 -0.0437222
MBNL1 muscleblind-like splicing regulator 1 -0.0433195
RAB7A RAB7A, member RAS oncogene family -0.0424974
ANGPTL4 angiopoietin-like 4 -0.0422753
ASPH aspartate beta-hydroxylase -0.0421194
TNRC18 trinucleotide repeat containing 18 -0.0409864
CEP170 centrosomal protein 170kDa -0.0405978
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0404981
CDKAL1 CDK5 regulatory subunit associated protein 1-like 1 -0.0403756
NAV2 neuron navigator 2 -0.0401455
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0400594
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 -0.0393875
ETV5 ets variant 5 -0.0387418
DTNA dystrobrevin, alpha -0.038483
ACER3 alkaline ceramidase 3 -0.0383551
PBX3 pre-B-cell leukemia homeobox 3 -0.038263
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein -0.0380927
CBFA2T2 core-binding factor, runt domain, alpha subunit 2; translocated to, 2 -0.0375664
EIF5B eukaryotic translation initiation factor 5B -0.0368566
HJURP Holliday junction recognition protein -0.0368516
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.036838
SPRY4 sprouty homolog 4 (Drosophila) -0.0363082
MED17 mediator complex subunit 17 -0.0362701
SMYD3 SET and MYND domain containing 3 -0.0361867
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0361628
LRCH3 leucine-rich repeats and calponin homology (CH) domain containing 3 -0.0357149
SDCCAG8 serologically defined colon cancer antigen 8 -0.0352427
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.0352231
CHD1 chromodomain helicase DNA binding protein 1 -0.0349352
SETX senataxin -0.0348488
STXBP1 syntaxin binding protein 1 -0.0343306
PHC2 polyhomeotic homolog 2 (Drosophila) -0.0339882
NKTR natural killer cell triggering receptor -0.0338451
ZFAND6 zinc finger, AN1-type domain 6 -0.0337037
PTBP2 polypyrimidine tract binding protein 2 -0.0332323
GNAS GNAS complex locus -0.032706
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0326983
EFL1 elongation factor like GTPase 1 -0.0326713
IGF2 insulin-like growth factor 2 -0.0325205
SETD5 SET domain containing 5 -0.0325096
UGCG UDP-glucose ceramide glucosyltransferase -0.0323667
GCC2 GRIP and coiled-coil domain containing 2 -0.0323305
ANKRD11 ankyrin repeat domain 11 -0.0322385
BIRC6 baculoviral IAP repeat containing 6 -0.0321599
PHF20 PHD finger protein 20 -0.0320675
CDH4 cadherin 4, type 1, R-cadherin (retinal) -0.0320185
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0318936