Bisoprolol (hemifumarate)_COLO 205 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bisoprolol (hemifumarate) perturbation in COLO 205 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bisoprolol (hemifumarate)_COLO 205 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 0.133648
EPSTI1 epithelial stromal interaction 1 (breast) 0.120243
BTBD9 BTB (POZ) domain containing 9 0.107665
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) 0.096705
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0860178
RABGAP1L RAB GTPase activating protein 1-like 0.0814175
TXNIP thioredoxin interacting protein 0.0704477
ZMYND8 zinc finger, MYND-type containing 8 0.069596
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.061109
LCN2 lipocalin 2 0.0586862
RUNX1 runt-related transcription factor 1 0.0573027
H1-0 H1.0 linker histone 0.0559506
NKD1 naked cuticle homolog 1 (Drosophila) 0.0540659
ATP11A ATPase, class VI, type 11A 0.0539775
SP100 SP100 nuclear antigen 0.0538404
RNF213 ring finger protein 213 0.0525378
EPHB2 EPH receptor B2 0.0522697
TSHZ2 teashirt zinc finger homeobox 2 0.0504882
ATXN1 ataxin 1 0.0488909
TMEM62 transmembrane protein 62 0.0482908
NCKAP5 NCK-associated protein 5 0.0479658
NRIP1 nuclear receptor interacting protein 1 0.0471404
MAP7 microtubule-associated protein 7 0.0469637
FOXP1 forkhead box P1 0.0468938
MX2 MX dynamin-like GTPase 2 0.046803
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.0445439
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 0.044239
XAF1 XIAP associated factor 1 0.0422762
RNF43 ring finger protein 43 0.0421745
PARP4 poly (ADP-ribose) polymerase family, member 4 0.0418257
SPATA13 spermatogenesis associated 13 0.0409102
LYZ lysozyme 0.0408019
PAN3 PAN3 poly(A) specific ribonuclease subunit 0.0405666
PTBP3 polypyrimidine tract binding protein 3 0.0386302
IGF1R insulin-like growth factor 1 receptor 0.0382884
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0373724
PRKCA protein kinase C, alpha 0.0373183
SPATS2L spermatogenesis associated, serine-rich 2-like 0.0371733
N4BP2L2 NEDD4 binding protein 2-like 2 0.0368406
CTNND1 catenin (cadherin-associated protein), delta 1 0.0367028
MAN1A1 mannosidase, alpha, class 1A, member 1 0.0365468
STK24 serine/threonine kinase 24 0.0365217
ARHGAP26 Rho GTPase activating protein 26 0.0363262
GMDS GDP-mannose 4,6-dehydratase 0.0360696
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.0358909
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0356494
TRIO trio Rho guanine nucleotide exchange factor 0.0347875
RAD51B RAD51 paralog B 0.0346098
DNAJC15 DnaJ (Hsp40) homolog, subfamily C, member 15 0.0343705
NF1 neurofibromin 1 0.0333834
PMP22 peripheral myelin protein 22 0.0333739
PATJ PATJ crumbs cell polarity complex component 0.0332473
ZDHHC20 zinc finger, DHHC-type containing 20 0.0323174
ADAR adenosine deaminase, RNA-specific 0.0320687
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0315392
CD46 CD46 molecule, complement regulatory protein 0.031317
OARD1 O-acyl-ADP-ribose deacylase 1 0.0311549
UBR2 ubiquitin protein ligase E3 component n-recognin 2 0.0308604
RHOBTB3 Rho-related BTB domain containing 3 0.0308095
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.0308074
IFNGR1 interferon gamma receptor 1 0.030735
MYO10 myosin X 0.0305277
MED13L mediator complex subunit 13-like 0.0301841
CPEB4 cytoplasmic polyadenylation element binding protein 4 0.0295167
FMN1 formin 1 0.0291875
TRERF1 transcriptional regulating factor 1 0.0289513
GSK3B glycogen synthase kinase 3 beta 0.0286325
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0284641
ITGA1 integrin, alpha 1 0.028235
LPP LIM domain containing preferred translocation partner in lipoma 0.0281022
ARHGAP32 Rho GTPase activating protein 32 0.028009
SREBF2 sterol regulatory element binding transcription factor 2 0.0275205
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 0.0274185
CDC42SE2 CDC42 small effector 2 0.0273198
RIGI RNA sensor RIG-I 0.0273072
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.0272864
RERE arginine-glutamic acid dipeptide (RE) repeats 0.027184
PRELID2 PRELI domain containing 2 0.0269704
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0268841
MED13 mediator complex subunit 13 0.0265422
KIAA1217 KIAA1217 0.026151
CD2AP CD2-associated protein 0.0261252
APP amyloid beta (A4) precursor protein 0.0258536
UBAC2 UBA domain containing 2 0.0257856
ITGA6 integrin, alpha 6 0.0257528
VCL vinculin 0.0257052
MAP3K5 mitogen-activated protein kinase kinase kinase 5 0.0256908
MSI2 musashi RNA-binding protein 2 0.025539
MAP3K1 mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase 0.0254794
ACTN4 actinin, alpha 4 0.0254769
SSH2 slingshot protein phosphatase 2 0.0252155
ZMYM2 zinc finger, MYM-type 2 0.0251548
HDAC4 histone deacetylase 4 0.0248711
EHBP1 EH domain binding protein 1 0.0246903
MACF1 microtubule-actin crosslinking factor 1 0.02458
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0245169
PTK2 protein tyrosine kinase 2 0.0244757
DOCK1 dedicator of cytokinesis 1 0.0244565
NCOR1 nuclear receptor corepressor 1 0.0244308
SYT1 synaptotagmin I 0.0242184

decreased expression

Symbol Name Standardized Value
LMO7 LIM domain 7 -0.166474
EGR1 early growth response 1 -0.11736
AREG amphiregulin -0.0815369
ANXA2 annexin A2 -0.0799484
FOS FBJ murine osteosarcoma viral oncogene homolog -0.0709127
EZR ezrin -0.0681907
SEC31A SEC31 homolog A (S. cerevisiae) -0.0576085
RAB7A RAB7A, member RAS oncogene family -0.0563668
B2M beta-2-microglobulin -0.0527035
NDRG1 N-myc downstream regulated 1 -0.0526208
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.051273
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0489646
ERN1 endoplasmic reticulum to nucleus signaling 1 -0.0477812
ERBIN erbb2 interacting protein -0.0476239
INTS6 integrator complex subunit 6 -0.0422647
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 -0.0383517
IGFBP3 insulin-like growth factor binding protein 3 -0.0379474
EFNB2 ephrin-B2 -0.0376482
SQSTM1 sequestosome 1 -0.0374363
FOSB FBJ murine osteosarcoma viral oncogene homolog B -0.037106
MT2A metallothionein 2A -0.036769
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0356071
MYO1E myosin IE -0.0346994
CSTB cystatin B (stefin B) -0.0333269
CLDN4 claudin 4 -0.033144
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0327877
FTL ferritin, light polypeptide -0.0325643
CCNL1 cyclin L1 -0.0322265
MACC1 metastasis associated in colon cancer 1 -0.0316635
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0301078
SEC24A SEC24 family member A -0.0297982
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0295442
HM13 histocompatibility (minor) 13 -0.029249
SPAG9 sperm associated antigen 9 -0.029016
TTC3 tetratricopeptide repeat domain 3 -0.0288394
ARF4 ADP-ribosylation factor 4 -0.0288024
MCL1 myeloid cell leukemia 1 -0.0287106
ANXA1 annexin A1 -0.0284144
PERP PERP, TP53 apoptosis effector -0.0281355
NEDD9 neural precursor cell expressed, developmentally down-regulated 9 -0.0280346
BLZF1 basic leucine zipper nuclear factor 1 -0.0274764
LOC102724023 ES1 protein homolog, mitochondrial -0.0273858
HKDC1 hexokinase domain containing 1 -0.0271964
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0262579
ADM adrenomedullin -0.0262158
GOLGA4 golgin A4 -0.0261018
TMSB10 thymosin beta 10 -0.0251626
AKAP9 A kinase (PRKA) anchor protein 9 -0.0251155
ITPKC inositol-trisphosphate 3-kinase C -0.0249237
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0248025
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0243142
SDCBP syndecan binding protein (syntenin) -0.0242998
FTH1 ferritin, heavy polypeptide 1 -0.024111
NABP1 nucleic acid binding protein 1 -0.023893
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0238324
RPS3 ribosomal protein S3 -0.0236599
SPDYA speedy/RINGO cell cycle regulator family member A -0.02365
DDIT3 DNA-damage-inducible transcript 3 -0.0235195
BAIAP2L1 BAI1-associated protein 2-like 1 -0.0231996
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.022982
JUN jun proto-oncogene -0.0228623
IRF1 interferon regulatory factor 1 -0.0227737
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0227376
TJP1 tight junction protein 1 -0.0223344
UGDH UDP-glucose 6-dehydrogenase -0.022217
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0221858
ENO2 enolase 2 (gamma, neuronal) -0.0218989
MCTP1 multiple C2 domains, transmembrane 1 -0.021483
CDHR2 cadherin-related family member 2 -0.0212731
POTEF POTE ankyrin domain family, member F -0.0210915
VIM vimentin -0.0209798
ZNF165 zinc finger protein 165 -0.0208641
PPP1R15A protein phosphatase 1, regulatory subunit 15A -0.0207836
MORF4L2 mortality factor 4 like 2 -0.020605
RPLP1 ribosomal protein, large, P1 -0.0204211
RND3 Rho family GTPase 3 -0.0203928
CALU calumenin -0.0203418
SLC38A1 solute carrier family 38, member 1 -0.0202779
RPL37A ribosomal protein L37a -0.0201667
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0200164
LMNA lamin A/C -0.0197693
ACTG1 actin gamma 1 -0.0195107
GK glycerol kinase -0.0194822
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 -0.019386
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0192525
RAB5A RAB5A, member RAS oncogene family -0.019237
KDM5B lysine (K)-specific demethylase 5B -0.0190022
RPL34 ribosomal protein L34 -0.0188166
EIF1 eukaryotic translation initiation factor 1 -0.0188156
PRSS22 protease, serine, 22 -0.0187379
RPS6 ribosomal protein S6 -0.018563
KRT23 keratin 23, type I -0.018449
LDHA lactate dehydrogenase A -0.0184239
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) -0.0183816
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.0182663
CYSTM1 cysteine-rich transmembrane module containing 1 -0.0182358
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0178076
KIF16B kinesin family member 16B -0.0177524
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.0177203
TMPRSS4 transmembrane protease, serine 4 -0.0177117