Bisoprolol (hemifumarate)_LOX-IMVI Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bisoprolol (hemifumarate) perturbation in LOX-IMVI cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bisoprolol (hemifumarate)_LOX-IMVI drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
VIM vimentin 0.106142
UGCG UDP-glucose ceramide glucosyltransferase 0.0616417
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0559989
EEF2 eukaryotic translation elongation factor 2 0.0553372
VCL vinculin 0.0552789
PGK1 phosphoglycerate kinase 1 0.0508086
CTSB cathepsin B 0.0465731
PKM pyruvate kinase, muscle 0.0459519
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0446553
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0432893
TPT1 tumor protein, translationally-controlled 1 0.0426034
SMAD3 SMAD family member 3 0.0411178
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0397143
CD44 CD44 molecule (Indian blood group) 0.037506
RTN4 reticulon 4 0.037425
NUP58 nucleoporin 58 0.0351476
NAMPT nicotinamide phosphoribosyltransferase 0.0344727
RPS23 ribosomal protein S23 0.0324663
RPS25 ribosomal protein S25 0.032057
VGF VGF nerve growth factor inducible 0.0320201
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0319305
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0316495
FN1 fibronectin 1 0.0295701
RPL4 ribosomal protein L4 0.028771
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0286861
POTEF POTE ankyrin domain family, member F 0.0281019
LDHA lactate dehydrogenase A 0.0274156
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0271392
ADAM9 ADAM metallopeptidase domain 9 0.0264181
TPM4 tropomyosin 4 0.0260952
CALR calreticulin 0.025874
TMEM123 transmembrane protein 123 0.0257739
AHNAK AHNAK nucleoprotein 0.0257215
FNDC3B fibronectin type III domain containing 3B 0.0254259
IL6ST interleukin 6 signal transducer 0.0241258
RPL7A ribosomal protein L7a 0.0240367
HSPA8 heat shock 70kDa protein 8 0.0239025
UBC ubiquitin C 0.0236934
ACTR3 ARP3 actin-related protein 3 homolog (yeast) 0.0234164
CDK17 cyclin-dependent kinase 17 0.0230682
ZFAND6 zinc finger, AN1-type domain 6 0.0229715
ANXA2 annexin A2 0.0228151
ATP5F1B ATP synthase F1 subunit beta 0.0225957
RPLP0 ribosomal protein, large, P0 0.0224153
RLF rearranged L-myc fusion 0.0222797
ZNF292 zinc finger protein 292 0.0220746
ACTN1 actinin, alpha 1 0.0220125
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0216924
TNIP1 TNFAIP3 interacting protein 1 0.0214922
FRMD6 FERM domain containing 6 0.0213754
RPS24 ribosomal protein S24 0.0212594
IGFBP3 insulin-like growth factor binding protein 3 0.0212498
CCN2 cellular communication network factor 2 0.0209159
RPL36A ribosomal protein L36a 0.0206388
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0202613
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0202587
YTHDF3 YTH N(6)-methyladenosine RNA binding protein 3 0.0200887
FLNA filamin A, alpha 0.0197315
TFG TRK-fused gene 0.0196972
BDNF brain-derived neurotrophic factor 0.0196501
PGAM4 phosphoglycerate mutase family member 4 0.0196278
NUP153 nucleoporin 153kDa 0.0194268
AXL AXL receptor tyrosine kinase 0.019416
RPL35A ribosomal protein L35a 0.0191463
MYH9 myosin, heavy chain 9, non-muscle 0.0190852
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 0.0183022
ELL2 elongation factor, RNA polymerase II, 2 0.018112
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0180561
ADAM19 ADAM metallopeptidase domain 19 0.0179895
VDAC1 voltage-dependent anion channel 1 0.0179338
MIER1 mesoderm induction early response 1, transcriptional regulator 0.0177986
RBM27 RNA binding motif protein 27 0.0176916
NPC1 Niemann-Pick disease, type C1 0.0176627
PAWR PRKC, apoptosis, WT1, regulator 0.0175569
PDIA6 protein disulfide isomerase family A, member 6 0.0174368
QKI QKI, KH domain containing, RNA binding 0.0173011
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0172535
MTF2 metal response element binding transcription factor 2 0.0170032
PDIA3 protein disulfide isomerase family A, member 3 0.0168834
PTBP3 polypyrimidine tract binding protein 3 0.0165153
RPS15 ribosomal protein S15 0.0164594
WDR43 WD repeat domain 43 0.0163974
NRP2 neuropilin 2 0.0162823
HLA-E major histocompatibility complex, class I, E 0.0160328
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0160081
EIF3M eukaryotic translation initiation factor 3, subunit M 0.0159814
PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme 0.0158657
PYROXD1 pyridine nucleotide-disulphide oxidoreductase domain 1 0.0158288
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0158061
MORF4L1 mortality factor 4 like 1 0.0157189
CCT8 chaperonin containing TCP1, subunit 8 (theta) 0.0156677
RASA2 RAS p21 protein activator 2 0.0156587
SOD2 superoxide dismutase 2, mitochondrial 0.015598
HILPDA hypoxia inducible lipid droplet-associated 0.015596
MIDEAS mitotic deacetylase associated SANT domain protein 0.0155128
TAPBP TAP binding protein (tapasin) 0.0154622
MYC v-myc avian myelocytomatosis viral oncogene homolog 0.0153293
SENP6 SUMO1/sentrin specific peptidase 6 0.0152578
FOXJ3 forkhead box J3 0.015117
TUBA1B tubulin, alpha 1b 0.0150314

decreased expression

Symbol Name Standardized Value
EFNA5 ephrin-A5 -0.256704
DTNA dystrobrevin, alpha -0.186415
EXT1 exostosin glycosyltransferase 1 -0.170491
PRKG1 protein kinase, cGMP-dependent, type I -0.154548
SLC8A1 solute carrier family 8 (sodium/calcium exchanger), member 1 -0.13626
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.112859
PHACTR1 phosphatase and actin regulator 1 -0.108498
ASPH aspartate beta-hydroxylase -0.102224
TMSB10 thymosin beta 10 -0.101887
LSAMP limbic system-associated membrane protein -0.101863
PBX3 pre-B-cell leukemia homeobox 3 -0.0970271
GPC6 glypican 6 -0.0870125
NALF1 NALCN channel auxiliary factor 1 -0.0867671
FTL ferritin, light polypeptide -0.0850184
MT2A metallothionein 2A -0.0848272
RUNX1 runt-related transcription factor 1 -0.0838878
TRIO trio Rho guanine nucleotide exchange factor -0.0833759
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0815271
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0768587
SDCCAG8 serologically defined colon cancer antigen 8 -0.0764039
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.0758653
PTK2 protein tyrosine kinase 2 -0.0753762
NTM neurotrimin -0.0749657
PTPRG protein tyrosine phosphatase, receptor type, G -0.0707113
CDH13 cadherin 13 -0.0700665
YBX3 Y box binding protein 3 -0.0698178
KIAA1549L KIAA1549-like -0.069137
PRKCE protein kinase C, epsilon -0.0681631
LIMCH1 LIM and calponin homology domains 1 -0.0665461
SAMD4A sterile alpha motif domain containing 4A -0.0654241
RPS6 ribosomal protein S6 -0.0654107
RPS19 ribosomal protein S19 -0.064813
RPL23 ribosomal protein L23 -0.0639603
SAMD3 sterile alpha motif domain containing 3 -0.0633003
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.0620024
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.0617791
HDAC9 histone deacetylase 9 -0.0575652
RPS3 ribosomal protein S3 -0.0566643
DST dystonin -0.0550715
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0535938
FMNL2 formin-like 2 -0.0518569
RPL37A ribosomal protein L37a -0.0509242
TLE4 transducin-like enhancer of split 4 -0.049919
ZCCHC7 zinc finger, CCHC domain containing 7 -0.049662
ZNF804A zinc finger protein 804A -0.0495599
RPL36 ribosomal protein L36 -0.0489471
PTPRD protein tyrosine phosphatase, receptor type, D -0.0470539
NAV1 neuron navigator 1 -0.0448967
RPL17-C18ORF32 RPL17-C18orf32 readthrough -0.0446412
RPL26 ribosomal protein L26 -0.0429683
MAPKAP1 mitogen-activated protein kinase associated protein 1 -0.0424736
ZEB1 zinc finger E-box binding homeobox 1 -0.0414931
MSR1 macrophage scavenger receptor 1 -0.041258
USP34 ubiquitin specific peptidase 34 -0.0410604
LPP LIM domain containing preferred translocation partner in lipoma -0.038825
KDM4C lysine (K)-specific demethylase 4C -0.0385033
ASCC3 activating signal cointegrator 1 complex subunit 3 -0.0384054
NAP1L1 nucleosome assembly protein 1-like 1 -0.0378431
RIGI RNA sensor RIG-I -0.0376336
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.0371165
TTC3 tetratricopeptide repeat domain 3 -0.036984
DOCK4 dedicator of cytokinesis 4 -0.0366985
NABP1 nucleic acid binding protein 1 -0.0361295
HMGA2 high mobility group AT-hook 2 -0.0360932
RPLP1 ribosomal protein, large, P1 -0.0359263
EGR1 early growth response 1 -0.0358834
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0358492
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0357697
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) -0.0355988
TMPRSS15 transmembrane protease, serine 15 -0.0354311
RPL13A ribosomal protein L13a -0.0353929
NDRG1 N-myc downstream regulated 1 -0.0353168
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0351503
KTN1 kinectin 1 (kinesin receptor) -0.0351264
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.0351171
ZNF638 zinc finger protein 638 -0.0344134
SPATS2L spermatogenesis associated, serine-rich 2-like -0.0341399
DSCAM Down syndrome cell adhesion molecule -0.033957
SSH2 slingshot protein phosphatase 2 -0.0337828
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0337109
NF1 neurofibromin 1 -0.033617
ANK3 ankyrin 3, node of Ranvier (ankyrin G) -0.0334866
ERC1 ELKS/RAB6-interacting/CAST family member 1 -0.0329814
SOS1 son of sevenless homolog 1 (Drosophila) -0.0329273
DGKI diacylglycerol kinase, iota -0.0328377
AEBP2 AE binding protein 2 -0.0328374
KIAA1217 KIAA1217 -0.0324777
PTCHD4 patched domain containing 4 -0.0322445
PRELID2 PRELI domain containing 2 -0.0321687
GOLGA4 golgin A4 -0.0319192
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0318728
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0315989
RPL12 ribosomal protein L12 -0.0311794
MYO10 myosin X -0.0309602
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.0308934
ACTG1 actin gamma 1 -0.0302144
RPTOR regulatory associated protein of MTOR, complex 1 -0.0299331
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.0299052
MARCHF4 membrane associated ring-CH-type finger 4 -0.0297991
RPS2 ribosomal protein S2 -0.0297036