Bisoprolol (hemifumarate)_NCI-H2030 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bisoprolol (hemifumarate) perturbation in NCI-H2030 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bisoprolol (hemifumarate)_NCI-H2030 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FTH1 ferritin, heavy polypeptide 1 0.0947609
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0505745
HSPA8 heat shock 70kDa protein 8 0.0393743
EEF2 eukaryotic translation elongation factor 2 0.031632
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0294427
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0261859
EEF1G eukaryotic translation elongation factor 1 gamma 0.0234027
LOC112694756 uncharaterized LOC112694756 0.0233649
PTP4A1 protein tyrosine phosphatase type IVA, member 1 0.0233118
RPL4 ribosomal protein L4 0.0228215
TUBB tubulin, beta class I 0.0218995
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0198895
MKI67 marker of proliferation Ki-67 0.0176751
CAVIN1 caveolae associated protein 1 0.0165781
PRRC2A proline-rich coiled-coil 2A 0.0154425
TXNRD1 thioredoxin reductase 1 0.0150393
PGAM4 phosphoglycerate mutase family member 4 0.0150002
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 0.01435
PKM pyruvate kinase, muscle 0.0142335
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0126653
YBX3 Y box binding protein 3 0.0123294
RRM2 ribonucleotide reductase M2 0.0122546
UBE2S ubiquitin-conjugating enzyme E2S 0.0118204
BUB1 BUB1 mitotic checkpoint serine/threonine kinase 0.0116399
HMGA1 high mobility group AT-hook 1 0.0113381
YBX1 Y box binding protein 1 0.0109108
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0108114
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0107588
FLNA filamin A, alpha 0.0105069
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0102223
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) 0.00983497
MYC v-myc avian myelocytomatosis viral oncogene homolog 0.00980849
UCK2 uridine-cytidine kinase 2 0.00969238
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.00958005
PTBP1 polypyrimidine tract binding protein 1 0.0094312
NOLC1 nucleolar and coiled-body phosphoprotein 1 0.00937461
PER1 period circadian clock 1 0.00936843
RPS2 ribosomal protein S2 0.0090268
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.00889396
DNMT1 DNA (cytosine-5-)-methyltransferase 1 0.00883795
TOP2A topoisomerase (DNA) II alpha 170kDa 0.00882782
SDC4 syndecan 4 0.0087579
PFKP phosphofructokinase, platelet 0.00872433
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa 0.00870328
RAD21 RAD21 homolog (S. pombe) 0.00857229
CCT3 chaperonin containing TCP1, subunit 3 (gamma) 0.00843112
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.008422
EIF4A1 eukaryotic translation initiation factor 4A1 0.00839354
BHLHE40 basic helix-loop-helix family, member e40 0.00831908
ELL elongation factor RNA polymerase II 0.00821998
TMEM123 transmembrane protein 123 0.00799188
CAPNS1 calpain, small subunit 1 0.0078395
TACC3 transforming, acidic coiled-coil containing protein 3 0.00780572
NCAPD2 non-SMC condensin I complex, subunit D2 0.00773693
BAG6 BCL2-associated athanogene 6 0.00773319
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.00760502
HNRNPAB heterogeneous nuclear ribonucleoprotein A/B 0.0075853
ARFGAP1 ADP-ribosylation factor GTPase activating protein 1 0.00753971
EEF1A2 eukaryotic translation elongation factor 1 alpha 2 0.0075287
IQGAP3 IQ motif containing GTPase activating protein 3 0.00743221
AZIN1 antizyme inhibitor 1 0.00735353
HNRNPUL2 heterogeneous nuclear ribonucleoprotein U-like 2 0.00734177
GPAT3 glycerol-3-phosphate acyltransferase 3 0.00732349
KLF6 Kruppel-like factor 6 0.00725386
DOT1L DOT1-like histone H3K79 methyltransferase 0.00725332
RAI1 retinoic acid induced 1 0.0071999
NAMPT nicotinamide phosphoribosyltransferase 0.00715896
HNRNPL heterogeneous nuclear ribonucleoprotein L 0.00715096
SF1 splicing factor 1 0.00709931
KPNA2 karyopherin alpha 2 (RAG cohort 1, importin alpha 1) 0.00705146
RPN2 ribophorin II 0.0069731
TGFBR2 transforming growth factor, beta receptor II (70/80kDa) 0.00694768
KIF18B kinesin family member 18B 0.0069466
PTMS parathymosin 0.00689561
RPSA ribosomal protein SA 0.00686055
WBP11 WW domain binding protein 11 0.00680436
ILF2 interleukin enhancer binding factor 2 0.00677839
PCGF2 polycomb group ring finger 2 0.006722
AREG amphiregulin 0.00672118
CDC20 cell division cycle 20 0.00668028
ATXN2L ataxin 2-like 0.00665611
VARS1 valyl-tRNA synthetase 1 0.00664545
UBE2C ubiquitin-conjugating enzyme E2C 0.00663464
BIRC3 baculoviral IAP repeat containing 3 0.0065891
NEK2 NIMA-related kinase 2 0.00657156
NR4A2 nuclear receptor subfamily 4, group A, member 2 0.00653102
CEP170B centrosomal protein 170B 0.0065182
RPL18 ribosomal protein L18 0.00651766
H1-0 H1.0 linker histone 0.00648406
CMC2 C-x(9)-C motif containing 2 0.00646665
TUBG1 tubulin, gamma 1 0.00643109
SNAPC1 small nuclear RNA activating complex, polypeptide 1, 43kDa 0.00641832
CDCA2 cell division cycle associated 2 0.00641115
XRCC6 X-ray repair complementing defective repair in Chinese hamster cells 6 0.00640398
ATP1A4 ATPase, Na+/K+ transporting, alpha 4 polypeptide 0.00639242
ADGRG6 adhesion G protein-coupled receptor G6 0.00633891
NUP93 nucleoporin 93kDa 0.00630286
FAM168A family with sequence similarity 168, member A 0.00629395
CALM3 calmodulin 3 (phosphorylase kinase, delta) 0.0062776
TCOF1 Treacher Collins-Franceschetti syndrome 1 0.0062753

decreased expression

Symbol Name Standardized Value
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.18902
PDE4D phosphodiesterase 4D, cAMP-specific -0.151536
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.133296
THSD4 thrombospondin, type I, domain containing 4 -0.131253
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.130153
MT2A metallothionein 2A -0.11846
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.116917
DOCK4 dedicator of cytokinesis 4 -0.0985597
IGFBP3 insulin-like growth factor binding protein 3 -0.0924924
SAMD4A sterile alpha motif domain containing 4A -0.0919814
FNDC3B fibronectin type III domain containing 3B -0.0769211
PARD3 par-3 family cell polarity regulator -0.0759952
VIM vimentin -0.0703789
DOCK5 dedicator of cytokinesis 5 -0.0654037
SVIL supervillin -0.0653401
SMOC1 SPARC related modular calcium binding 1 -0.0585279
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0579137
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0555823
PM20D1 peptidase M20 domain containing 1 -0.0552837
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0552304
SIPA1L1 signal-induced proliferation-associated 1 like 1 -0.054772
VPS13B vacuolar protein sorting 13 homolog B (yeast) -0.0541679
ARHGAP26 Rho GTPase activating protein 26 -0.0540562
USP34 ubiquitin specific peptidase 34 -0.0535369
EIF1 eukaryotic translation initiation factor 1 -0.0531942
KYNU kynureninase -0.0516954
EGFR epidermal growth factor receptor -0.0509097
ACTG1 actin gamma 1 -0.050893
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 -0.0505844
LPP LIM domain containing preferred translocation partner in lipoma -0.0503227
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0500188
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0497551
PYGL phosphorylase, glycogen, liver -0.047504
MAML3 mastermind-like 3 (Drosophila) -0.0462143
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.0460638
TMSB10 thymosin beta 10 -0.0451831
BIRC6 baculoviral IAP repeat containing 6 -0.0450434
COPA coatomer protein complex, subunit alpha -0.0446263
ASPH aspartate beta-hydroxylase -0.0444551
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0442305
IGF2 insulin-like growth factor 2 -0.0439334
DST dystonin -0.0436984
ZFAND3 zinc finger, AN1-type domain 3 -0.0434235
DSCAM Down syndrome cell adhesion molecule -0.0433994
CMIP c-Maf inducing protein -0.042844
POTEF POTE ankyrin domain family, member F -0.0419157
SHANK2 SH3 and multiple ankyrin repeat domains 2 -0.0415665
GLIS3 GLIS family zinc finger 3 -0.0411347
S100A6 S100 calcium binding protein A6 -0.040897
FMNL2 formin-like 2 -0.0401631
KTN1 kinectin 1 (kinesin receptor) -0.0400444
OSMR oncostatin M receptor -0.0399888
UTRN utrophin -0.0390974
ZBTB20 zinc finger and BTB domain containing 20 -0.0386801
HLA-B major histocompatibility complex, class I, B -0.0381081
NEGR1 neuronal growth regulator 1 -0.0380317
ANKRD11 ankyrin repeat domain 11 -0.0375274
PTK2 protein tyrosine kinase 2 -0.0361378
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0360918
PDLIM5 PDZ and LIM domain 5 -0.035828
ERBIN erbb2 interacting protein -0.0354044
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0352648
FAM107B family with sequence similarity 107, member B -0.0350127
BASP1 brain abundant, membrane attached signal protein 1 -0.0349644
EHBP1 EH domain binding protein 1 -0.0347116
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0346463
ATXN1 ataxin 1 -0.0344631
UBASH3B ubiquitin associated and SH3 domain containing B -0.0343114
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0340833
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 -0.0336222
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.033452
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.03324
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0332108
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0331366
GLG1 golgi glycoprotein 1 -0.0330244
GOLGA4 golgin A4 -0.0329377
RPS4Y1 ribosomal protein S4, Y-linked 1 -0.0327874
MACF1 microtubule-actin crosslinking factor 1 -0.0326481
WAC WW domain containing adaptor with coiled-coil -0.0320813
EDIL3 EGF-like repeats and discoidin I-like domains 3 -0.0320503
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0319124
MAP3K20 mitogen-activated protein kinase kinase kinase 20 -0.0316783
NUMB numb homolog (Drosophila) -0.0310716
PTPRM protein tyrosine phosphatase, receptor type, M -0.0306737
MCL1 myeloid cell leukemia 1 -0.0304707
SBF2 SET binding factor 2 -0.0299062
EXOC6B exocyst complex component 6B -0.0298381
CDKAL1 CDK5 regulatory subunit associated protein 1-like 1 -0.0297278
DENND4A DENN/MADD domain containing 4A -0.0293965
PDIA3 protein disulfide isomerase family A, member 3 -0.029314
MYOF myoferlin -0.0293005
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) -0.0291065
AKAP13 A kinase (PRKA) anchor protein 13 -0.0289068
BICC1 BicC family RNA binding protein 1 -0.0284885
CUX1 cut-like homeobox 1 -0.0284818
PATJ PATJ crumbs cell polarity complex component -0.0284068
NF1 neurofibromin 1 -0.0280245
ELL2 elongation factor, RNA polymerase II, 2 -0.0279393
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0277023
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0276492