Bisoprolol (hemifumarate)_SNU-423 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bisoprolol (hemifumarate) perturbation in SNU-423 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bisoprolol (hemifumarate)_SNU-423 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
NAMPT nicotinamide phosphoribosyltransferase 0.141581
FN1 fibronectin 1 0.105006
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0687336
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0636402
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0632128
ELL2 elongation factor, RNA polymerase II, 2 0.0595072
RTN4 reticulon 4 0.0531069
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.0506083
FNDC3B fibronectin type III domain containing 3B 0.0482712
MYH9 myosin, heavy chain 9, non-muscle 0.0449718
MKI67 marker of proliferation Ki-67 0.041292
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0412155
MSN moesin 0.0407726
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0333758
TPM4 tropomyosin 4 0.0318381
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0303871
CENPF centromere protein F, 350/400kDa 0.0302308
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.027961
ARRDC3 arrestin domain containing 3 0.0278833
ATP13A3 ATPase type 13A3 0.0266941
ZNF292 zinc finger protein 292 0.0265928
ANLN anillin, actin binding protein 0.0257004
DENND5A DENN/MADD domain containing 5A 0.0241895
KIF4A kinesin family member 4A 0.0231941
THBS1 thrombospondin 1 0.0229153
TNIP1 TNFAIP3 interacting protein 1 0.0220006
DUSP5 dual specificity phosphatase 5 0.02132
TXNRD1 thioredoxin reductase 1 0.0210071
TPX2 TPX2, microtubule-associated 0.0209194
UGCG UDP-glucose ceramide glucosyltransferase 0.0205829
DIAPH3 diaphanous-related formin 3 0.0202377
SDC4 syndecan 4 0.0201772
CDCP1 CUB domain containing protein 1 0.020091
PTBP3 polypyrimidine tract binding protein 3 0.0198695
TAPBP TAP binding protein (tapasin) 0.0196281
EDIL3 EGF-like repeats and discoidin I-like domains 3 0.0191495
SOD2 superoxide dismutase 2, mitochondrial 0.0188862
KLF6 Kruppel-like factor 6 0.0187386
TMEM123 transmembrane protein 123 0.0186527
SYAP1 synapse associated protein 1 0.0182065
CKAP5 cytoskeleton associated protein 5 0.0180582
SMAD3 SMAD family member 3 0.017712
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0173339
CLIC4 chloride intracellular channel 4 0.0173297
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0172133
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 0.0169934
NUP153 nucleoporin 153kDa 0.0166267
BCAR3 breast cancer anti-estrogen resistance 3 0.016426
BCLAF1 BCL2-associated transcription factor 1 0.0162712
KIF11 kinesin family member 11 0.0162632
FLNA filamin A, alpha 0.0159197
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0155339
RB1CC1 RB1-inducible coiled-coil 1 0.0154305
ACTN1 actinin, alpha 1 0.0152575
TRAF3IP2 TRAF3 interacting protein 2 0.0152262
RUNX2 runt-related transcription factor 2 0.0150656
MX1 MX dynamin-like GTPase 1 0.0150619
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 0.0150552
LDLR low density lipoprotein receptor 0.0150433
YME1L1 YME1-like 1 ATPase 0.0148693
TMEM41B transmembrane protein 41B 0.0145366
OSMR oncostatin M receptor 0.0144572
ARL5B ADP-ribosylation factor-like 5B 0.0143939
ICAM1 intercellular adhesion molecule 1 0.0142564
TUBB tubulin, beta class I 0.0141957
GNAI3 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 0.0141828
PLPP3 phospholipid phosphatase 3 0.0136149
CREB5 cAMP responsive element binding protein 5 0.0135295
ANXA5 annexin A5 0.0134709
CALD1 caldesmon 1 0.0134429
TXNIP thioredoxin interacting protein 0.0133762
TTK TTK protein kinase 0.0133759
ADAM17 ADAM metallopeptidase domain 17 0.0133664
EEF2 eukaryotic translation elongation factor 2 0.0133081
CDC42SE2 CDC42 small effector 2 0.0132939
IL6ST interleukin 6 signal transducer 0.0132641
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0132035
RASA2 RAS p21 protein activator 2 0.0132023
NRIP1 nuclear receptor interacting protein 1 0.0131877
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0130957
EZR ezrin 0.0128515
ADNP activity-dependent neuroprotector homeobox 0.0127347
PRKCSH protein kinase C substrate 80K-H 0.0126641
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 0.0126558
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0126496
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0125851
NAV2 neuron navigator 2 0.0125298
TGFB2 transforming growth factor, beta 2 0.0123866
ECT2 epithelial cell transforming 2 0.0123813
FBXL5 F-box and leucine-rich repeat protein 5 0.0123516
AXL AXL receptor tyrosine kinase 0.0123429
MED14 mediator complex subunit 14 0.0119498
MARCHF6 membrane associated ring-CH-type finger 6 0.0119343
KIF18A kinesin family member 18A 0.0118528
ELOVL5 ELOVL fatty acid elongase 5 0.0118391
UBA6 ubiquitin-like modifier activating enzyme 6 0.0118212
APP amyloid beta (A4) precursor protein 0.0117016
ACTR2 ARP2 actin-related protein 2 homolog (yeast) 0.0115581
TSC22D2 TSC22 domain family, member 2 0.0115401
NFE2L2 nuclear factor, erythroid 2-like 2 0.01147

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.175848
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.138024
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough -0.111266
FRMD4A FERM domain containing 4A -0.108033
HLA-B major histocompatibility complex, class I, B -0.0967428
FTL ferritin, light polypeptide -0.0966353
HMGA2 high mobility group AT-hook 2 -0.092926
TMSB10 thymosin beta 10 -0.0918295
GLIS3 GLIS family zinc finger 3 -0.0908411
IGFBP3 insulin-like growth factor binding protein 3 -0.0770474
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0701606
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.068577
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.0673915
CDH13 cadherin 13 -0.0671825
HDAC9 histone deacetylase 9 -0.0660685
RPS6 ribosomal protein S6 -0.0657237
MT2A metallothionein 2A -0.0650917
DST dystonin -0.0637185
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0615936
RPL23 ribosomal protein L23 -0.0595548
B2M beta-2-microglobulin -0.0587027
INTS6 integrator complex subunit 6 -0.0577756
RPL37A ribosomal protein L37a -0.0571958
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0562787
RPS8 ribosomal protein S8 -0.0558098
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0554662
RPS3 ribosomal protein S3 -0.0540361
RPS12 ribosomal protein S12 -0.0538207
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0509214
HLA-A major histocompatibility complex, class I, A -0.0503969
RPL9 ribosomal protein L9 -0.0502436
GRIN2A glutamate receptor, ionotropic, N-methyl D-aspartate 2A -0.0478699
TRIO trio Rho guanine nucleotide exchange factor -0.0475067
LDHA lactate dehydrogenase A -0.0471782
PDE10A phosphodiesterase 10A -0.0471542
TPT1 tumor protein, translationally-controlled 1 -0.0460083
SDK1 sidekick cell adhesion molecule 1 -0.0453415
RAI14 retinoic acid induced 14 -0.0450027
RPLP1 ribosomal protein, large, P1 -0.0441383
RAB7A RAB7A, member RAS oncogene family -0.0441144
FRMPD4 FERM and PDZ domain containing 4 -0.0439812
IER3 immediate early response 3 -0.0436153
AKAP12 A kinase (PRKA) anchor protein 12 -0.0433474
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0432391
NAP1L1 nucleosome assembly protein 1-like 1 -0.0418078
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0417193
SQSTM1 sequestosome 1 -0.0410623
RPS19 ribosomal protein S19 -0.0407468
AFF3 AF4/FMR2 family, member 3 -0.0399524
RPL26 ribosomal protein L26 -0.0397341
RACK1 receptor for activated C kinase 1 -0.0390303
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0381773
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.037768
DIAPH2 diaphanous-related formin 2 -0.037237
RPL5 ribosomal protein L5 -0.0363695
NDRG1 N-myc downstream regulated 1 -0.036161
RPL31 ribosomal protein L31 -0.0343722
RPL12 ribosomal protein L12 -0.0343456
EFNA5 ephrin-A5 -0.034208
RPL19 ribosomal protein L19 -0.0329798
CANX calnexin -0.0328643
PTMA prothymosin, alpha -0.0325305
RPL35A ribosomal protein L35a -0.0324176
MACF1 microtubule-actin crosslinking factor 1 -0.0321396
RPL36 ribosomal protein L36 -0.0320407
ATXN1 ataxin 1 -0.0315975
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0315669
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0313076
ASPH aspartate beta-hydroxylase -0.0312328
PAPPA pregnancy-associated plasma protein A, pappalysin 1 -0.030968
IFITM3 interferon induced transmembrane protein 3 -0.0299708
COL5A1 collagen, type V, alpha 1 -0.0298579
BTG1 B-cell translocation gene 1, anti-proliferative -0.0298482
FBXL7 F-box and leucine-rich repeat protein 7 -0.0297424
RND3 Rho family GTPase 3 -0.0294548
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.0292023
RPL11 ribosomal protein L11 -0.0291562
EGFR epidermal growth factor receptor -0.0290554
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) -0.0290331
ADM adrenomedullin -0.0289328
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.028899
PRELID2 PRELI domain containing 2 -0.0286966
RPS4X ribosomal protein S4, X-linked -0.0286302
SPDYA speedy/RINGO cell cycle regulator family member A -0.0285797
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0284188
SAMD3 sterile alpha motif domain containing 3 -0.0284077
RPS14 ribosomal protein S14 -0.0282658
ACTG1 actin gamma 1 -0.028144
GOLGB1 golgin B1 -0.027742
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0275442
TBC1D22A TBC1 domain family, member 22A -0.0272073
PLIN2 perilipin 2 -0.0271656
EIF1 eukaryotic translation initiation factor 1 -0.0270973
PRKCA protein kinase C, alpha -0.0270947
PTPRK protein tyrosine phosphatase, receptor type, K -0.0268952
PHF3 PHD finger protein 3 -0.0268324
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0262242
ZMYND8 zinc finger, MYND-type containing 8 -0.0260992
SLC38A1 solute carrier family 38, member 1 -0.0256576
RPL13A ribosomal protein L13a -0.0256284