Bisoprolol (hemifumarate)_SW 1088 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bisoprolol (hemifumarate) perturbation in SW 1088 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bisoprolol (hemifumarate)_SW 1088 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FGFR2 fibroblast growth factor receptor 2 0.0510779
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0330357
LOC112694756 uncharaterized LOC112694756 0.0329009
FLNA filamin A, alpha 0.0311324
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 0.0306267
PDE10A phosphodiesterase 10A 0.0304674
ELL2 elongation factor, RNA polymerase II, 2 0.028476
COL7A1 collagen, type VII, alpha 1 0.0277679
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 0.0256057
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 0.0253022
SIPA1L3 signal-induced proliferation-associated 1 like 3 0.0243539
EP400 E1A binding protein p400 0.0240948
NFIX nuclear factor I/X (CCAAT-binding transcription factor) 0.0239229
NPSR1 neuropeptide S receptor 1 0.0237394
SDC4 syndecan 4 0.0236247
RPS16 ribosomal protein S16 0.0235599
CD2AP CD2-associated protein 0.023212
FRMD6 FERM domain containing 6 0.0229471
CD46 CD46 molecule, complement regulatory protein 0.0229356
ACTN4 actinin, alpha 4 0.0224931
H1-0 H1.0 linker histone 0.0223565
CORO1C coronin, actin binding protein, 1C 0.0222249
MSI2 musashi RNA-binding protein 2 0.0220851
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 0.021901
ZFP36 ZFP36 ring finger protein 0.0217751
ADARB1 adenosine deaminase, RNA-specific, B1 0.0211234
MNT MAX network transcriptional repressor 0.0209597
RASA2 RAS p21 protein activator 2 0.0203885
AHNAK AHNAK nucleoprotein 0.0202493
ZNF292 zinc finger protein 292 0.0200021
POM121 POM121 transmembrane nucleoporin 0.0199201
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0198784
ACBD3 acyl-CoA binding domain containing 3 0.0198208
LARP4B La ribonucleoprotein domain family, member 4B 0.0196993
RORA RAR-related orphan receptor A 0.0195776
RPS2 ribosomal protein S2 0.0195246
APLP2 amyloid beta (A4) precursor-like protein 2 0.0195237
PAFAH1B1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa) 0.0194974
KLF6 Kruppel-like factor 6 0.0193783
RPL4 ribosomal protein L4 0.0193552
RNASE12 ribonuclease, RNase A family, 12 (non-active) 0.0192785
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 0.0192232
SHB Src homology 2 domain containing adaptor protein B 0.0191941
AFF1 AF4/FMR2 family, member 1 0.0191842
TRPM7 transient receptor potential cation channel, subfamily M, member 7 0.0189593
SPAG9 sperm associated antigen 9 0.0189088
MORF4L2 mortality factor 4 like 2 0.018867
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0187597
MT1X metallothionein 1X 0.0186886
AP1S3 adaptor-related protein complex 1, sigma 3 subunit 0.018658
KPNB1 karyopherin (importin) beta 1 0.0183937
KRT18 keratin 18, type I 0.0183266
BDP1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB 0.0182327
PELP1 proline, glutamate and leucine rich protein 1 0.0180979
TMEM259 transmembrane protein 259 0.0179829
FLNB filamin B, beta 0.0178398
FOCAD focadhesin 0.0177992
SUPT6H suppressor of Ty 6 homolog (S. cerevisiae) 0.0177677
CNOT1 CCR4-NOT transcription complex, subunit 1 0.0177312
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0176753
CARS1 cysteinyl-tRNA synthetase 1 0.0176648
PRG2 proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein) 0.0176567
CAMKMT calmodulin-lysine N-methyltransferase 0.0175594
IQSEC1 IQ motif and Sec7 domain 1 0.0175211
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.0174989
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.0172464
VGF VGF nerve growth factor inducible 0.0172115
SEC14L2 SEC14-like 2 (S. cerevisiae) 0.0172088
ANKMY2 ankyrin repeat and MYND domain containing 2 0.0171735
MKNK2 MAP kinase interacting serine/threonine kinase 2 0.0171254
APP amyloid beta (A4) precursor protein 0.0170892
HMGA1 high mobility group AT-hook 1 0.0169422
LIMCH1 LIM and calponin homology domains 1 0.0169069
FHIT fragile histidine triad 0.0169053
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) 0.0169003
TIMP2 TIMP metallopeptidase inhibitor 2 0.0168028
DIPK1A divergent protein kinase domain 1A 0.0167469
SOX9 SRY (sex determining region Y)-box 9 0.0167235
SAFB2 scaffold attachment factor B2 0.0167098
CDK5RAP3 CDK5 regulatory subunit associated protein 3 0.0166391
ST6GAL1 ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 0.0166358
TPST1 tyrosylprotein sulfotransferase 1 0.0166204
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0166108
CLSTN1 calsyntenin 1 0.0165951
DIP2C DIP2 disco-interacting protein 2 homolog C (Drosophila) 0.0165859
MINK1 misshapen-like kinase 1 0.0165614
DYNC1I2 dynein, cytoplasmic 1, intermediate chain 2 0.0165576
PUM2 pumilio RNA-binding family member 2 0.0164646
LPCAT1 lysophosphatidylcholine acyltransferase 1 0.0163437
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 0.0162971
CEMIP cell migration inducing protein, hyaluronan binding 0.0162866
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0162739
UBE3A ubiquitin protein ligase E3A 0.0162469
GMDS GDP-mannose 4,6-dehydratase 0.0162431
RALY RALY heterogeneous nuclear ribonucleoprotein 0.0161999
SYT1 synaptotagmin I 0.0161273
RPL13A ribosomal protein L13a 0.0161091
GFPT2 glutamine-fructose-6-phosphate transaminase 2 0.0160709
CMC2 C-x(9)-C motif containing 2 0.015945
YBX3 Y box binding protein 3 0.0158895

decreased expression

Symbol Name Standardized Value
IGFBP3 insulin-like growth factor binding protein 3 -0.380981
VIM vimentin -0.197069
TGFBI transforming growth factor, beta-induced, 68kDa -0.18418
CXCL8 chemokine (C-X-C motif) ligand 8 -0.151156
FN1 fibronectin 1 -0.150799
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.150478
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.132784
HLA-B major histocompatibility complex, class I, B -0.129186
TIMP3 TIMP metallopeptidase inhibitor 3 -0.12776
B2M beta-2-microglobulin -0.12467
POTEF POTE ankyrin domain family, member F -0.0949218
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0926665
PDIA3 protein disulfide isomerase family A, member 3 -0.0864189
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0862408
F3 coagulation factor III (thromboplastin, tissue factor) -0.0856834
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0766845
COL6A1 collagen, type VI, alpha 1 -0.075506
CD44 CD44 molecule (Indian blood group) -0.0698102
MAP1B microtubule-associated protein 1B -0.0677244
ENO1 enolase 1, (alpha) -0.0633515
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 -0.0613143
CDH13 cadherin 13 -0.0612959
IL6 interleukin 6 -0.0584156
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.0581505
CALD1 caldesmon 1 -0.0580051
MT2A metallothionein 2A -0.052803
SEPTIN7 septin 7 -0.0515528
CALR calreticulin -0.0507155
CANX calnexin -0.0503356
CALU calumenin -0.0494752
UBC ubiquitin C -0.0493481
STC1 stanniocalcin 1 -0.049016
TPT1 tumor protein, translationally-controlled 1 -0.0486677
NAV1 neuron navigator 1 -0.0468114
TRIO trio Rho guanine nucleotide exchange factor -0.0463505
IGFBP7 insulin-like growth factor binding protein 7 -0.0459466
SEC31A SEC31 homolog A (S. cerevisiae) -0.0451438
GLIS3 GLIS family zinc finger 3 -0.0441545
LOX lysyl oxidase -0.0432551
PDIA6 protein disulfide isomerase family A, member 6 -0.0429995
AKAP9 A kinase (PRKA) anchor protein 9 -0.0425387
SOD2 superoxide dismutase 2, mitochondrial -0.0424793
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0420047
TENT5A terminal nucleotidyltransferase 5A -0.0416611
S100A10 S100 calcium binding protein A10 -0.041323
FNDC3B fibronectin type III domain containing 3B -0.0405899
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0404403
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0394923
ASPH aspartate beta-hydroxylase -0.0389899
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0370686
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0361426
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0358413
EXT1 exostosin glycosyltransferase 1 -0.0346813
VEGFC vascular endothelial growth factor C -0.0343567
KDELR2 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2 -0.0337309
ZNF395 zinc finger protein 395 -0.0334626
VEGFA vascular endothelial growth factor A -0.0329507
FTL ferritin, light polypeptide -0.0327625
TMSB10 thymosin beta 10 -0.0327328
KMT2C lysine (K)-specific methyltransferase 2C -0.0323766
TPM4 tropomyosin 4 -0.0321834
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.03182
ACTG1 actin gamma 1 -0.0317781
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.03139
PGK1 phosphoglycerate kinase 1 -0.0309711
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0308507
RNF24 ring finger protein 24 -0.0306043
LMAN1 lectin, mannose-binding, 1 -0.0300517
NRXN3 neurexin 3 -0.0299178
COG6 component of oligomeric golgi complex 6 -0.0298185
PKM pyruvate kinase, muscle -0.0296589
TNS3 tensin 3 -0.0294623
HLA-A major histocompatibility complex, class I, A -0.0294587
CDK6 cyclin-dependent kinase 6 -0.0293615
TMSB4X thymosin beta 4, X-linked -0.0289156
PLOD1 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 -0.0288328
TIMP1 TIMP metallopeptidase inhibitor 1 -0.028273
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0282099
RAI14 retinoic acid induced 14 -0.0274902
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) -0.0265158
LIMS1 LIM and senescent cell antigen-like domains 1 -0.0263425
ZKSCAN1 zinc finger with KRAB and SCAN domains 1 -0.0260952
FNDC3A fibronectin type III domain containing 3A -0.026027
ANXA5 annexin A5 -0.0257933
RTN4 reticulon 4 -0.025556
HMGA2 high mobility group AT-hook 2 -0.0254112
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0253363
VDAC1 voltage-dependent anion channel 1 -0.0251466
PSD3 pleckstrin and Sec7 domain containing 3 -0.0250465
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0249957
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0249049
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0242653
KYNU kynureninase -0.0241203
ARF4 ADP-ribosylation factor 4 -0.0240729
ALCAM activated leukocyte cell adhesion molecule -0.0239651
COL1A2 collagen, type I, alpha 2 -0.02384
HLA-C major histocompatibility complex, class I, C -0.0237908
PTPRM protein tyrosine phosphatase, receptor type, M -0.0237578
RPS6 ribosomal protein S6 -0.0237027
HIP1 huntingtin interacting protein 1 -0.0233892