Bortezomib_CHP-212 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bortezomib perturbation in CHP-212 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bortezomib_CHP-212 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.268019
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.1206
VCL vinculin 0.0828571
AKAP12 A kinase (PRKA) anchor protein 12 0.077028
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0767909
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0722949
NDRG1 N-myc downstream regulated 1 0.0707197
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0674772
SEPTIN9 septin 9 0.066712
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0638908
EXT1 exostosin glycosyltransferase 1 0.059606
B2M beta-2-microglobulin 0.0594152
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0589005
RPL23 ribosomal protein L23 0.0552765
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0546634
MSI2 musashi RNA-binding protein 2 0.0545124
PTMA prothymosin, alpha 0.0537051
MEF2A myocyte enhancer factor 2A 0.0524791
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0521778
SMAD3 SMAD family member 3 0.0517749
FN1 fibronectin 1 0.0512022
TIMP3 TIMP metallopeptidase inhibitor 3 0.0507206
RAB7A RAB7A, member RAS oncogene family 0.0494082
ATXN1 ataxin 1 0.0493861
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0488784
RPS12 ribosomal protein S12 0.0487064
HSPH1 heat shock 105kDa/110kDa protein 1 0.0485949
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0484972
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit 0.0482799
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0472808
IGFBP3 insulin-like growth factor binding protein 3 0.0468635
DTNA dystrobrevin, alpha 0.0468056
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0467885
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0465488
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0461604
EPAS1 endothelial PAS domain protein 1 0.0451178
MCL1 myeloid cell leukemia 1 0.0435653
GPBP1 GC-rich promoter binding protein 1 0.0426008
LOC102724023 ES1 protein homolog, mitochondrial 0.0423038
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0412889
NPAS2 neuronal PAS domain protein 2 0.0403929
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0403475
TOMM20 translocase of outer mitochondrial membrane 20 homolog (yeast) 0.0391655
DDIT4 DNA-damage-inducible transcript 4 0.0385452
CUX1 cut-like homeobox 1 0.0380353
RPL37A ribosomal protein L37a 0.037956
FAM13A family with sequence similarity 13, member A 0.0365167
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.0361032
EEF2 eukaryotic translation elongation factor 2 0.0360742
ST6GALNAC3 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 0.0360636
CCDC88A coiled-coil domain containing 88A 0.0357801
RPLP1 ribosomal protein, large, P1 0.0357606
ZSWIM6 zinc finger, SWIM-type containing 6 0.0356689
PLAT plasminogen activator, tissue 0.0356431
TOP2A topoisomerase (DNA) II alpha 170kDa 0.035452
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0354323
PRRC2C proline-rich coiled-coil 2C 0.0353488
HSPA1B heat shock 70kDa protein 1B 0.0352773
RPL9 ribosomal protein L9 0.034638
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0342263
EGFR epidermal growth factor receptor 0.0340074
NFIB nuclear factor I/B 0.0334466
KTN1 kinectin 1 (kinesin receptor) 0.0332273
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0330927
HELZ helicase with zinc finger 0.0330659
VEGFA vascular endothelial growth factor A 0.0326781
PDE8A phosphodiesterase 8A 0.0325733
INTS6 integrator complex subunit 6 0.032174
RACK1 receptor for activated C kinase 1 0.0318284
CDH13 cadherin 13 0.0315039
SIK3 SIK family kinase 3 0.0310351
CENPF centromere protein F, 350/400kDa 0.0308815
TPM1 tropomyosin 1 (alpha) 0.0308241
ZNF609 zinc finger protein 609 0.0304794
RPS3 ribosomal protein S3 0.0303048
PCBP2 poly(rC) binding protein 2 0.030276
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0300862
ASPH aspartate beta-hydroxylase 0.0293949
TPR translocated promoter region, nuclear basket protein 0.0291436
GSE1 Gse1 coiled-coil protein 0.0291094
FUS FUS RNA binding protein 0.0289721
FNDC3B fibronectin type III domain containing 3B 0.0285002
TMSB10 thymosin beta 10 0.0284124
HMGA2 high mobility group AT-hook 2 0.0283992
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) 0.0283965
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0283174
DDX46 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 0.0281277
ZMIZ1 zinc finger, MIZ-type containing 1 0.0279781
HILPDA hypoxia inducible lipid droplet-associated 0.0278247
RPL7 ribosomal protein L7 0.0277516
SQSTM1 sequestosome 1 0.0277053
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0275696
EZR ezrin 0.0275545
CALD1 caldesmon 1 0.0275336
HM13 histocompatibility (minor) 13 0.0273732
TIMP2 TIMP metallopeptidase inhibitor 2 0.0272078
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0271471
PSME4 proteasome (prosome, macropain) activator subunit 4 0.0269165
MYH9 myosin, heavy chain 9, non-muscle 0.0267063
RPL27 ribosomal protein L27 0.026604

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.142034
SYT1 synaptotagmin I -0.140637
IGF2 insulin-like growth factor 2 -0.109174
LGR5 leucine-rich repeat containing G protein-coupled receptor 5 -0.100393
MAP1B microtubule-associated protein 1B -0.0919102
TPST1 tyrosylprotein sulfotransferase 1 -0.0845829
NCAM2 neural cell adhesion molecule 2 -0.0689202
CACNA2D1 calcium channel, voltage-dependent, alpha 2/delta subunit 1 -0.0630537
FMN1 formin 1 -0.0565192
KLHL13 kelch-like family member 13 -0.0551504
SOS1 son of sevenless homolog 1 (Drosophila) -0.0543114
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0509041
TENT5A terminal nucleotidyltransferase 5A -0.0460472
MEIS2 Meis homeobox 2 -0.0458709
AOPEP aminopeptidase O (putative) -0.0445357
DLC1 DLC1 Rho GTPase activating protein -0.0429228
PDE3A phosphodiesterase 3A, cGMP-inhibited -0.0428315
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.0425625
ITPRID2 ITPR interacting domain containing 2 -0.0421254
ANGPT1 angiopoietin 1 -0.0420407
ZFC3H1 zinc finger, C3H1-type containing -0.0392701
DST dystonin -0.0379936
ZNF804A zinc finger protein 804A -0.0376626
LINGO2 leucine rich repeat and Ig domain containing 2 -0.0374344
PSD3 pleckstrin and Sec7 domain containing 3 -0.0372412
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.0362412
PTPRK protein tyrosine phosphatase, receptor type, K -0.036108
DISP1 dispatched homolog 1 (Drosophila) -0.0352538
HAND2 heart and neural crest derivatives expressed 2 -0.0348881
ANKRD17 ankyrin repeat domain 17 -0.0347143
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) -0.0342918
ATRNL1 attractin-like 1 -0.0339039
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.0330009
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0325676
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 -0.0319121
SCN9A sodium channel, voltage gated, type IX alpha subunit -0.0312018
LPIN1 lipin 1 -0.0302519
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0298279
ARHGAP24 Rho GTPase activating protein 24 -0.0293844
TMEM108 transmembrane protein 108 -0.028647
STXBP5 syntaxin binding protein 5 (tomosyn) -0.0283102
MBD5 methyl-CpG binding domain protein 5 -0.0280433
HMBOX1 homeobox containing 1 -0.0280126
PDE4D phosphodiesterase 4D, cAMP-specific -0.0279535
AHR aryl hydrocarbon receptor -0.0274016
ARID5B AT rich interactive domain 5B (MRF1-like) -0.0272437
ZMYM2 zinc finger, MYM-type 2 -0.0270694
TRIB2 tribbles pseudokinase 2 -0.0269935
CACNB2 calcium channel, voltage-dependent, beta 2 subunit -0.026243
SF3B3 splicing factor 3b, subunit 3, 130kDa -0.025764
USP9Y ubiquitin specific peptidase 9, Y-linked -0.0257441
COL1A1 collagen, type I, alpha 1 -0.025544
ANK3 ankyrin 3, node of Ranvier (ankyrin G) -0.0252134
CD36 CD36 molecule (thrombospondin receptor) -0.0252107
MAP3K1 mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase -0.0249787
COL3A1 collagen, type III, alpha 1 -0.02468
NRIP1 nuclear receptor interacting protein 1 -0.0246788
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.0243577
ADGRL2 adhesion G protein-coupled receptor L2 -0.02423
SLC38A2 solute carrier family 38, member 2 -0.0241957
GLCCI1 glucocorticoid induced 1 -0.0241888
GNG2 guanine nucleotide binding protein (G protein), gamma 2 -0.0232956
FTL ferritin, light polypeptide -0.0232637
CD46 CD46 molecule, complement regulatory protein -0.0231607
UNC5C unc-5 homolog C (C. elegans) -0.0230801
SH3PXD2B SH3 and PX domains 2B -0.0230421
PTPN13 protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) -0.0228119
NRP1 neuropilin 1 -0.022606
SH3BP5 SH3-domain binding protein 5 (BTK-associated) -0.022417
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0223836
FRMD4A FERM domain containing 4A -0.0221981
GNA13 guanine nucleotide binding protein (G protein), alpha 13 -0.0221426
PHACTR2 phosphatase and actin regulator 2 -0.0221361
ZFHX4 zinc finger homeobox 4 -0.0220899
SIK2 salt-inducible kinase 2 -0.0220064
RALYL RALY RNA binding protein-like -0.0219134
PTPRE protein tyrosine phosphatase, receptor type, E -0.0218129
TAS2R14 taste receptor, type 2, member 14 -0.0216505
FAM107B family with sequence similarity 107, member B -0.0214332
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0213593
PTPRD protein tyrosine phosphatase, receptor type, D -0.0211812
GAREM1 GRB2 associated regulator of MAPK1 subtype 1 -0.0210515
PCDH9 protocadherin 9 -0.0210345
ENPP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 -0.0207497
GAB2 GRB2-associated binding protein 2 -0.0207249
ZBTB20 zinc finger and BTB domain containing 20 -0.0206032
ARHGAP5 Rho GTPase activating protein 5 -0.0205209
FDFT1 farnesyl-diphosphate farnesyltransferase 1 -0.0204104
ICE1 interactor of little elongation complex ELL subunit 1 -0.0203945
PRKD1 protein kinase D1 -0.0202756
CRH corticotropin releasing hormone -0.0202117
GPC5 glypican 5 -0.020087
CCNL1 cyclin L1 -0.0199569
ANTXR2 anthrax toxin receptor 2 -0.0198694
CCDC50 coiled-coil domain containing 50 -0.0197689
TNFRSF19 tumor necrosis factor receptor superfamily, member 19 -0.0197385
GATAD2B GATA zinc finger domain containing 2B -0.0196357
ATG5 autophagy related 5 -0.019618
LRP1B low density lipoprotein receptor-related protein 1B -0.0196151
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0194548