Bortezomib_HepG2/C3A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bortezomib perturbation in HepG2/C3A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bortezomib_HepG2/C3A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
IGF2 insulin-like growth factor 2 0.350409
AKAP12 A kinase (PRKA) anchor protein 12 0.151808
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0949463
ASPH aspartate beta-hydroxylase 0.0921174
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0895688
UBC ubiquitin C 0.0798644
GCNT2 glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group) 0.0706527
HSPA1A heat shock 70kDa protein 1A 0.0682198
KIF1B kinesin family member 1B 0.0611225
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0591247
ABCC2 ATP-binding cassette, sub-family C (CFTR/MRP), member 2 0.0547805
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 0.0539437
SQSTM1 sequestosome 1 0.0534908
HSPA1B heat shock 70kDa protein 1B 0.0522277
ENO1 enolase 1, (alpha) 0.0451832
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0449821
CLIP1 CAP-GLY domain containing linker protein 1 0.0448971
UBR3 ubiquitin protein ligase E3 component n-recognin 3 (putative) 0.0428536
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0426677
BIRC6 baculoviral IAP repeat containing 6 0.0425217
SNX29 sorting nexin 29 0.0419366
FAM107B family with sequence similarity 107, member B 0.041504
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.0406533
FAM219A family with sequence similarity 219, member A 0.0405576
MAP1B microtubule-associated protein 1B 0.039832
TUSC3 tumor suppressor candidate 3 0.0391476
ATXN1 ataxin 1 0.0389452
PSMD1 proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 0.0378114
USP47 ubiquitin specific peptidase 47 0.0358173
NDRG1 N-myc downstream regulated 1 0.0353018
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0339103
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0338887
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0337144
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0334492
DST dystonin 0.0327346
KIF21A kinesin family member 21A 0.032255
PDLIM5 PDZ and LIM domain 5 0.0322101
ABAT 4-aminobutyrate aminotransferase 0.0310206
SPSB1 splA/ryanodine receptor domain and SOCS box containing 1 0.0306461
KIAA1217 KIAA1217 0.0306339
TXNRD1 thioredoxin reductase 1 0.0296154
JUN jun proto-oncogene 0.0290625
CSNK1A1 casein kinase 1, alpha 1 0.0283818
GK glycerol kinase 0.0282742
APLP2 amyloid beta (A4) precursor-like protein 2 0.0280968
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0277169
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0274561
VCP valosin containing protein 0.0272719
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0270216
SLMAP sarcolemma associated protein 0.0268813
RPTOR regulatory associated protein of MTOR, complex 1 0.0266011
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0264599
PTGES3 prostaglandin E synthase 3 (cytosolic) 0.025944
GLIS3 GLIS family zinc finger 3 0.0255431
SUPT6H suppressor of Ty 6 homolog (S. cerevisiae) 0.0244755
ZEB1 zinc finger E-box binding homeobox 1 0.0244577
GPATCH2L G patch domain containing 2-like 0.0244159
MYH9 myosin, heavy chain 9, non-muscle 0.0242799
GCLC glutamate-cysteine ligase, catalytic subunit 0.0241556
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0239566
RUNX1 runt-related transcription factor 1 0.023898
LPP LIM domain containing preferred translocation partner in lipoma 0.0234552
ZBTB20 zinc finger and BTB domain containing 20 0.0232474
HMGA1 high mobility group AT-hook 1 0.022817
UBE4B ubiquitination factor E4B 0.022636
STC2 stanniocalcin 2 0.0226284
KMT2C lysine (K)-specific methyltransferase 2C 0.0224129
ABCB1 ATP-binding cassette, sub-family B (MDR/TAP), member 1 0.022345
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 0.0221136
FTH1 ferritin, heavy polypeptide 1 0.0219879
BMERB1 bMERB domain containing 1 0.0218986
UBQLN1 ubiquilin 1 0.0218961
PSMD12 proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 0.0217574
KYNU kynureninase 0.0217074
TBCA tubulin folding cofactor A 0.0214138
ABHD3 abhydrolase domain containing 3 0.021368
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0212603
ALS2 amyotrophic lateral sclerosis 2 (juvenile) 0.0212422
KLC1 kinesin light chain 1 0.0211139
CMIP c-Maf inducing protein 0.0210378
STK17A serine/threonine kinase 17a 0.0209961
AP1G1 adaptor-related protein complex 1, gamma 1 subunit 0.0208776
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0207673
TNS1 tensin 1 0.0206348
IQGAP1 IQ motif containing GTPase activating protein 1 0.0205958
ARID5B AT rich interactive domain 5B (MRF1-like) 0.0205002
SON SON DNA binding protein 0.0204946
WNK1 WNK lysine deficient protein kinase 1 0.0203757
PHTF1 putative homeodomain transcription factor 1 0.0202104
TPM4 tropomyosin 4 0.0202053
IARS1 isoleucyl-tRNA synthetase 1 0.0201932
ECPAS Ecm29 proteasome adaptor and scaffold 0.0201847
N4BP2L2 NEDD4 binding protein 2-like 2 0.0199065
PPP4R3B protein phosphatase 4 regulatory subunit 3B 0.0198101
CLTC clathrin, heavy chain (Hc) 0.019626
EEF2 eukaryotic translation elongation factor 2 0.0194573
CANX calnexin 0.0194546
RAB7A RAB7A, member RAS oncogene family 0.0193494
ZNF638 zinc finger protein 638 0.0193364
DNAJB1 DnaJ (Hsp40) homolog, subfamily B, member 1 0.0192347

decreased expression

Symbol Name Standardized Value
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 -0.263793
APOB apolipoprotein B -0.202072
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.137277
C3 complement component 3 -0.0931536
FTL ferritin, light polypeptide -0.0882447
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0813318
UBB ubiquitin B -0.0711181
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.069454
RPL37A ribosomal protein L37a -0.0611306
ELL2 elongation factor, RNA polymerase II, 2 -0.0589426
GPC6 glypican 6 -0.054648
CRYAB crystallin, alpha B -0.053104
RPL11 ribosomal protein L11 -0.048424
HSPH1 heat shock 105kDa/110kDa protein 1 -0.0481492
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.0469496
CCL20 chemokine (C-C motif) ligand 20 -0.0467491
RPS8 ribosomal protein S8 -0.0458219
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 -0.0448164
TRIM26 tripartite motif containing 26 -0.043134
GPC3 glypican 3 -0.0427868
RPS6 ribosomal protein S6 -0.0410958
FNDC3B fibronectin type III domain containing 3B -0.0383847
ACSL4 acyl-CoA synthetase long-chain family member 4 -0.0381762
RPL5 ribosomal protein L5 -0.0375727
RPLP0 ribosomal protein, large, P0 -0.0368814
HSPA8 heat shock 70kDa protein 8 -0.0339174
RPS27A ribosomal protein S27a -0.0337326
RPS12 ribosomal protein S12 -0.033166
VPS54 vacuolar protein sorting 54 homolog (S. cerevisiae) -0.0325978
RPS3 ribosomal protein S3 -0.032357
JMJD1C jumonji domain containing 1C -0.0320939
A2M alpha-2-macroglobulin -0.0312487
LRMDA leucine rich melanocyte differentiation associated -0.030447
SDC4 syndecan 4 -0.0303498
ABTB3 ankyrin repeat and BTB domain containing 3 -0.0302981
RPS17 ribosomal protein S17 -0.0296734
DHRS2 dehydrogenase/reductase (SDR family) member 2 -0.0292506
ITIH2 inter-alpha-trypsin inhibitor heavy chain 2 -0.0291125
HSPA6 heat shock 70kDa protein 6 (HSP70B') -0.0290302
MBNL3 muscleblind-like splicing regulator 3 -0.028956
MT2A metallothionein 2A -0.0289502
RPL13A ribosomal protein L13a -0.0286218
SLC38A1 solute carrier family 38, member 1 -0.0285313
ACSL3 acyl-CoA synthetase long-chain family member 3 -0.0285154
RPS19 ribosomal protein S19 -0.0280963
EML4 echinoderm microtubule associated protein like 4 -0.0278885
GOLGA4 golgin A4 -0.0270759
RRBP1 ribosome binding protein 1 -0.0263238
RPL9 ribosomal protein L9 -0.0262377
RPL31 ribosomal protein L31 -0.026233
LCN2 lipocalin 2 -0.0256794
RPL38 ribosomal protein L38 -0.0253382
RPL19 ribosomal protein L19 -0.0251196
RPS25 ribosomal protein S25 -0.0246499
FBF1 Fas (TNFRSF6) binding factor 1 -0.0244007
PEG10 paternally expressed 10 -0.0232428
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) -0.0230619
PTPRG protein tyrosine phosphatase, receptor type, G -0.0229223
PTBP3 polypyrimidine tract binding protein 3 -0.0226432
RPL26 ribosomal protein L26 -0.0222907
GPAM glycerol-3-phosphate acyltransferase, mitochondrial -0.0222867
SOX4 SRY (sex determining region Y)-box 4 -0.0222573
EPB41L2 erythrocyte membrane protein band 4.1-like 2 -0.0221029
RPL12 ribosomal protein L12 -0.0220564
RPS13 ribosomal protein S13 -0.0220018
SESTD1 SEC14 and spectrin domains 1 -0.0219895
MALT1 MALT1 paracaspase -0.021878
SLC6A14 solute carrier family 6 (amino acid transporter), member 14 -0.0213159
WWC2 WW and C2 domain containing 2 -0.0208325
HLF hepatic leukemia factor -0.0207224
PTPRM protein tyrosine phosphatase, receptor type, M -0.0206592
MEF2A myocyte enhancer factor 2A -0.0206284
MTUS1 microtubule associated tumor suppressor 1 -0.020588
ANKRD10 ankyrin repeat domain 10 -0.0205587
NRIP1 nuclear receptor interacting protein 1 -0.0205188
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0203326
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) -0.0202755
QKI QKI, KH domain containing, RNA binding -0.0199352
CEMIP2 cell migration inducing hyaluronidase 2 -0.0192057
ITGA1 integrin, alpha 1 -0.0190622
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0190501
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0189291
XPR1 xenotropic and polytropic retrovirus receptor 1 -0.018903
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0188932
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 -0.0186864
RPS16 ribosomal protein S16 -0.0185037
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0184318
KDM3A lysine (K)-specific demethylase 3A -0.0184314
CFB complement factor B -0.0175932
RPL7 ribosomal protein L7 -0.0173715
TM4SF1 transmembrane 4 L six family member 1 -0.0172577
ACYP2 acylphosphatase 2, muscle type -0.0171985
PTP4A1 protein tyrosine phosphatase type IVA, member 1 -0.0171644
MRTFA myocardin related transcription factor A -0.0170911
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 -0.0170899
ARID1B AT rich interactive domain 1B (SWI1-like) -0.0170311
IGFBP1 insulin-like growth factor binding protein 1 -0.016983
RBM25 RNA binding motif protein 25 -0.016898
SLC38A2 solute carrier family 38, member 2 -0.0168188
HSPB1 heat shock 27kDa protein 1 -0.0166726