Bortezomib_LS 180 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bortezomib perturbation in LS 180 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bortezomib_LS 180 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.271412
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.086867
MUC6 mucin 6, oligomeric mucus/gel-forming 0.0564216
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.056136
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0525774
PTMA prothymosin, alpha 0.0519776
VEGFA vascular endothelial growth factor A 0.0508436
ITGA6 integrin, alpha 6 0.0477007
LMO7 LIM domain 7 0.0427048
LDHA lactate dehydrogenase A 0.0378886
LGR4 leucine-rich repeat containing G protein-coupled receptor 4 0.0376848
TMSB10 thymosin beta 10 0.0365042
GOLGA4 golgin A4 0.034101
EZR ezrin 0.0329299
PTGES3 prostaglandin E synthase 3 (cytosolic) 0.0326362
AFF1 AF4/FMR2 family, member 1 0.0312721
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.030943
MT2A metallothionein 2A 0.0303966
POTEF POTE ankyrin domain family, member F 0.030362
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0288812
NDRG1 N-myc downstream regulated 1 0.0282427
SRRM2 serine/arginine repetitive matrix 2 0.0277132
ABHD3 abhydrolase domain containing 3 0.0274235
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0269881
RPS8 ribosomal protein S8 0.0267092
MED13 mediator complex subunit 13 0.0251936
FAT1 FAT atypical cadherin 1 0.0250413
LGALS3 lectin, galactoside-binding, soluble, 3 0.0248236
YBX1 Y box binding protein 1 0.0245542
TXNIP thioredoxin interacting protein 0.0245287
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0241906
KMT2E lysine (K)-specific methyltransferase 2E 0.0241027
TPM3 tropomyosin 3 0.0233221
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0232875
CALR calreticulin 0.0229824
PSME4 proteasome (prosome, macropain) activator subunit 4 0.0229779
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0228116
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0225565
FTH1 ferritin, heavy polypeptide 1 0.0223537
GPBP1 GC-rich promoter binding protein 1 0.0222676
PNN pinin, desmosome associated protein 0.0219821
ENO1 enolase 1, (alpha) 0.0218784
HSPH1 heat shock 105kDa/110kDa protein 1 0.0214221
SIK3 SIK family kinase 3 0.0214169
SLMAP sarcolemma associated protein 0.0212421
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0211123
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0207944
LOC102724023 ES1 protein homolog, mitochondrial 0.0204045
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 0.0203111
BRD2 bromodomain containing 2 0.0200882
EPS8 epidermal growth factor receptor pathway substrate 8 0.0199412
MBNL2 muscleblind-like splicing regulator 2 0.0198524
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0198187
TPI1 triosephosphate isomerase 1 0.0197639
KTN1 kinectin 1 (kinesin receptor) 0.0193985
CENPF centromere protein F, 350/400kDa 0.0193934
CHORDC1 cysteine and histidine-rich domain (CHORD) containing 1 0.0192481
UBE2H ubiquitin-conjugating enzyme E2H 0.0189607
MYO5B myosin VB 0.0187392
PDZD8 PDZ domain containing 8 0.018727
PELI1 pellino E3 ubiquitin protein ligase 1 0.0186981
LOC112694756 uncharaterized LOC112694756 0.0186587
GAREM1 GRB2 associated regulator of MAPK1 subtype 1 0.0185054
ESYT2 extended synaptotagmin-like protein 2 0.0183875
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0182297
SOX9 SRY (sex determining region Y)-box 9 0.0179504
LMNA lamin A/C 0.0177744
GCLC glutamate-cysteine ligase, catalytic subunit 0.0177618
AKAP9 A kinase (PRKA) anchor protein 9 0.0177408
PKM pyruvate kinase, muscle 0.0175863
TMF1 TATA element modulatory factor 1 0.0175703
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0175361
TSC22D2 TSC22 domain family, member 2 0.0174767
MT1E metallothionein 1E 0.0171915
KRT18 keratin 18, type I 0.0171425
SREK1IP1 SREK1-interacting protein 1 0.0171214
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.0170006
RPS26 ribosomal protein S26 0.0168551
PPDPF pancreatic progenitor cell differentiation and proliferation factor 0.0168374
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0168142
UNC13B unc-13 homolog B (C. elegans) 0.0167587
FXR1 fragile X mental retardation, autosomal homolog 1 0.0166299
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.016571
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0165353
RAB7A RAB7A, member RAS oncogene family 0.0164758
EHF ets homologous factor 0.0164575
WHRN whirlin 0.0164572
ZNF292 zinc finger protein 292 0.0164353
SRRM1 serine/arginine repetitive matrix 1 0.0163785
APLP2 amyloid beta (A4) precursor-like protein 2 0.0162313
ZFC3H1 zinc finger, C3H1-type containing 0.0160687
RBM25 RNA binding motif protein 25 0.0160199
PRRC2C proline-rich coiled-coil 2C 0.0158834
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 0.0158066
RPL17-C18ORF32 RPL17-C18orf32 readthrough 0.0156179
TGFBR3 transforming growth factor, beta receptor III 0.0156175
RPL36 ribosomal protein L36 0.0155582
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0153357
PFN1 profilin 1 0.0152558
CLCN3 chloride channel, voltage-sensitive 3 0.0151037

decreased expression

Symbol Name Standardized Value
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.134369
VCL vinculin -0.128804
NPSR1 neuropeptide S receptor 1 -0.107545
ANTXR2 anthrax toxin receptor 2 -0.0666168
TPT1 tumor protein, translationally-controlled 1 -0.062393
NALF1 NALCN channel auxiliary factor 1 -0.0621869
GPHN gephyrin -0.0537428
CEMIP cell migration inducing protein, hyaluronan binding -0.0506304
PDLIM5 PDZ and LIM domain 5 -0.0479113
MYO1E myosin IE -0.0475217
S100P S100 calcium binding protein P -0.0429952
RPL12 ribosomal protein L12 -0.0414703
CCSER1 coiled-coil serine-rich protein 1 -0.0403416
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0398152
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0392653
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0392589
PALLD palladin, cytoskeletal associated protein -0.0391445
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0390476
GMDS GDP-mannose 4,6-dehydratase -0.0388248
AHNAK AHNAK nucleoprotein -0.0383322
ASPH aspartate beta-hydroxylase -0.0382502
LPP LIM domain containing preferred translocation partner in lipoma -0.0353799
LAMA4 laminin, alpha 4 -0.0347722
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0340422
PIGR polymeric immunoglobulin receptor -0.0331506
ONECUT3 one cut homeobox 3 -0.0327847
TPM4 tropomyosin 4 -0.0312246
SLC35F3 solute carrier family 35, member F3 -0.0310464
FHIT fragile histidine triad -0.0302899
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0301982
SMYD3 SET and MYND domain containing 3 -0.0301118
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0296511
IER3 immediate early response 3 -0.0296403
TNS4 tensin 4 -0.0295335
RPS24 ribosomal protein S24 -0.0291951
PRSS3 protease, serine, 3 -0.0287547
PDE4D phosphodiesterase 4D, cAMP-specific -0.0280335
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B -0.0279109
KRT6A keratin 6A, type II -0.0277974
ANXA2 annexin A2 -0.0262762
FTL ferritin, light polypeptide -0.0260483
FLNB filamin B, beta -0.026014
UBC ubiquitin C -0.0258469
FHL2 four and a half LIM domains 2 -0.0256971
TAS2R14 taste receptor, type 2, member 14 -0.0251541
RPL4 ribosomal protein L4 -0.0250945
ALCAM activated leukocyte cell adhesion molecule -0.0246477
SLC20A2 solute carrier family 20 (phosphate transporter), member 2 -0.0243983
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.024142
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0236756
MAML3 mastermind-like 3 (Drosophila) -0.0235904
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) -0.0233606
POF1B premature ovarian failure, 1B -0.0232625
AHCYL2 adenosylhomocysteinase-like 2 -0.0231417
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0220427
CD46 CD46 molecule, complement regulatory protein -0.0219064
HSD17B12 hydroxysteroid (17-beta) dehydrogenase 12 -0.0217387
SAMD5 sterile alpha motif domain containing 5 -0.0216717
NFIA nuclear factor I/A -0.0215029
NR4A1 nuclear receptor subfamily 4, group A, member 1 -0.0212485
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0211809
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0211785
UBB ubiquitin B -0.0209952
FERMT1 fermitin family member 1 -0.0209808
PSD3 pleckstrin and Sec7 domain containing 3 -0.0209238
PTPRG protein tyrosine phosphatase, receptor type, G -0.0209082
ARL15 ADP-ribosylation factor-like 15 -0.0202371
ZBTB20 zinc finger and BTB domain containing 20 -0.0200678
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.020056
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0199208
TUFT1 tuftelin 1 -0.0197506
MECOM MDS1 and EVI1 complex locus -0.0196707
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 -0.0195668
TXNRD1 thioredoxin reductase 1 -0.0194835
KRT16 keratin 16, type I -0.0194777
TBC1D22A TBC1 domain family, member 22A -0.0194648
NRXN3 neurexin 3 -0.0194378
LARGE1 LARGE xylosyl- and glucuronyltransferase 1 -0.0193224
DIAPH2 diaphanous-related formin 2 -0.0188603
ANKRD10 ankyrin repeat domain 10 -0.018752
MBNL1 muscleblind-like splicing regulator 1 -0.0186237
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.018475
RPL26 ribosomal protein L26 -0.0184547
MTAP methylthioadenosine phosphorylase -0.0184309
ARHGAP5 Rho GTPase activating protein 5 -0.0183437
OSBPL10 oxysterol binding protein-like 10 -0.0183421
SETX senataxin -0.0182985
DENND1A DENN/MADD domain containing 1A -0.0182545
MAML2 mastermind-like 2 (Drosophila) -0.018187
EXOC4 exocyst complex component 4 -0.0180652
PKP2 plakophilin 2 -0.0180075
LDLR low density lipoprotein receptor -0.0179136
RPLP0 ribosomal protein, large, P0 -0.0177964
ABR active BCR-related -0.0177579
RABGAP1L RAB GTPase activating protein 1-like -0.0177378
RNF43 ring finger protein 43 -0.0176961
LAMC2 laminin, gamma 2 -0.0176429
ACTN4 actinin, alpha 4 -0.0175678
EGR1 early growth response 1 -0.0175288
RPL13A ribosomal protein L13a -0.017413