Bortezomib_NCI-H2122 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bortezomib perturbation in NCI-H2122 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bortezomib_NCI-H2122 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
NDRG1 N-myc downstream regulated 1 0.166475
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.144506
UBC ubiquitin C 0.127019
LAMB3 laminin, beta 3 0.111908
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.109245
JMJD1C jumonji domain containing 1C 0.0990163
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0950408
BACE2 beta-site APP-cleaving enzyme 2 0.0747749
HSPA8 heat shock 70kDa protein 8 0.0729739
MT2A metallothionein 2A 0.0725033
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0706497
ESYT2 extended synaptotagmin-like protein 2 0.0704718
MYOF myoferlin 0.0639904
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 0.063841
FNDC3B fibronectin type III domain containing 3B 0.0627871
NPEPPS aminopeptidase puromycin sensitive 0.0614104
OGA O-GlcNAcase 0.0583248
DSCAM Down syndrome cell adhesion molecule 0.0580525
UBE2H ubiquitin-conjugating enzyme E2H 0.0556635
NAP1L1 nucleosome assembly protein 1-like 1 0.0550876
MAP3K2 mitogen-activated protein kinase kinase kinase 2 0.0545418
LIMCH1 LIM and calponin homology domains 1 0.0520221
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0499909
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0498401
AK1 adenylate kinase 1 0.0496801
BZW1 basic leucine zipper and W2 domains 1 0.0490268
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0484736
ASPH aspartate beta-hydroxylase 0.0483711
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0474385
PRKCA protein kinase C, alpha 0.0468081
KYNU kynureninase 0.0467924
EXT1 exostosin glycosyltransferase 1 0.0455287
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0450381
TBC1D22A TBC1 domain family, member 22A 0.0444939
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0442736
DNAJB1 DnaJ (Hsp40) homolog, subfamily B, member 1 0.0428536
CANX calnexin 0.0417722
PTPRM protein tyrosine phosphatase, receptor type, M 0.0411582
MBNL1 muscleblind-like splicing regulator 1 0.0407274
ENO1 enolase 1, (alpha) 0.0403637
ANXA2 annexin A2 0.040174
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0398322
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 0.0395607
USP34 ubiquitin specific peptidase 34 0.039518
FN1 fibronectin 1 0.0391556
PDIA3 protein disulfide isomerase family A, member 3 0.0390157
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 0.0389225
GRB10 growth factor receptor-bound protein 10 0.0387659
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 0.0385853
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0385333
LOC112694756 uncharaterized LOC112694756 0.0378799
TM4SF1 transmembrane 4 L six family member 1 0.0378528
ERRFI1 ERBB receptor feedback inhibitor 1 0.0377697
FTH1 ferritin, heavy polypeptide 1 0.0371645
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0368712
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0359089
RAB7A RAB7A, member RAS oncogene family 0.0352014
NAMPT nicotinamide phosphoribosyltransferase 0.0349787
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0332456
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0326047
CALU calumenin 0.0321019
ZMYND8 zinc finger, MYND-type containing 8 0.0316152
ZFAND3 zinc finger, AN1-type domain 3 0.0315231
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0312673
IQGAP1 IQ motif containing GTPase activating protein 1 0.0308943
TMSB10 thymosin beta 10 0.0308885
LAMA4 laminin, alpha 4 0.0308167
EFNA5 ephrin-A5 0.0306111
SQSTM1 sequestosome 1 0.0305038
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0302048
KRT17 keratin 17, type I 0.0298744
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0297133
STAU1 staufen double-stranded RNA binding protein 1 0.0295621
GPATCH2L G patch domain containing 2-like 0.02945
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0293771
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.028667
MYO1E myosin IE 0.0264076
MARCHF6 membrane associated ring-CH-type finger 6 0.0262574
EZR ezrin 0.0253573
BRIP1 BRCA1 interacting protein C-terminal helicase 1 0.0239172
DLG1 discs, large homolog 1 (Drosophila) 0.023856
PAN3 PAN3 poly(A) specific ribonuclease subunit 0.0233803
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0226942
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0225741
STC1 stanniocalcin 1 0.0225098
MYH9 myosin, heavy chain 9, non-muscle 0.0224889
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0224337
TXNRD1 thioredoxin reductase 1 0.022158
TPT1 tumor protein, translationally-controlled 1 0.0211937
SFTPA2 surfactant protein A2 0.0207281
VIM vimentin 0.0206666
MBNL2 muscleblind-like splicing regulator 2 0.0187771
ZNF638 zinc finger protein 638 0.018445
CD44 CD44 molecule (Indian blood group) 0.0183324
ANKRD17 ankyrin repeat domain 17 0.0177627
ABI1 abl-interactor 1 0.0176026
PDE10A phosphodiesterase 10A 0.0171757
EEF2 eukaryotic translation elongation factor 2 0.0169723
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 0.0169666
PSME4 proteasome (prosome, macropain) activator subunit 4 0.0167846

decreased expression

Symbol Name Standardized Value
IFIH1 interferon induced with helicase C domain 1 -0.121079
AKAP12 A kinase (PRKA) anchor protein 12 -0.110721
ACSL3 acyl-CoA synthetase long-chain family member 3 -0.105116
RSAD2 radical S-adenosyl methionine domain containing 2 -0.0917205
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) -0.0751986
SPAG9 sperm associated antigen 9 -0.0705582
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0689113
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.067024
FNDC3A fibronectin type III domain containing 3A -0.0627251
HSPH1 heat shock 105kDa/110kDa protein 1 -0.0616308
IGF2 insulin-like growth factor 2 -0.0603553
PGK1 phosphoglycerate kinase 1 -0.0599715
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0575501
PAPOLA poly(A) polymerase alpha -0.0564373
NALF1 NALCN channel auxiliary factor 1 -0.0559136
FAT1 FAT atypical cadherin 1 -0.055141
WSB1 WD repeat and SOCS box containing 1 -0.0532107
XPR1 xenotropic and polytropic retrovirus receptor 1 -0.0529459
PRRC2C proline-rich coiled-coil 2C -0.0528351
RPS6 ribosomal protein S6 -0.0528145
MED13L mediator complex subunit 13-like -0.0518951
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 -0.0515003
CHORDC1 cysteine and histidine-rich domain (CHORD) containing 1 -0.0509143
LPP LIM domain containing preferred translocation partner in lipoma -0.0498425
ZBTB20 zinc finger and BTB domain containing 20 -0.0498356
SH3KBP1 SH3-domain kinase binding protein 1 -0.0475931
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0467924
VCL vinculin -0.0454525
BPTF bromodomain PHD finger transcription factor -0.0449793
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.044741
CREBBP CREB binding protein -0.0446166
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 -0.0445367
TANC1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 -0.0442035
RPS8 ribosomal protein S8 -0.0437611
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme -0.0429495
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 -0.0421611
FRMD5 FERM domain containing 5 -0.0403677
OASL 2'-5'-oligoadenylate synthetase-like -0.0398744
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 -0.0391011
DSPP dentin sialophosphoprotein -0.038545
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0383305
RPS21 ribosomal protein S21 -0.0380352
C6ORF132 chromosome 6 open reading frame 132 -0.0378773
SLC2A13 solute carrier family 2 (facilitated glucose transporter), member 13 -0.0377893
RPL7A ribosomal protein L7a -0.037564
SLC38A2 solute carrier family 38, member 2 -0.0373854
MSI2 musashi RNA-binding protein 2 -0.0372955
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0372571
PRELID2 PRELI domain containing 2 -0.037233
EGFR epidermal growth factor receptor -0.0360593
STK17A serine/threonine kinase 17a -0.03582
NIPBL Nipped-B homolog (Drosophila) -0.0355658
PICALM phosphatidylinositol binding clathrin assembly protein -0.0349505
PTMA prothymosin, alpha -0.0348536
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 -0.0340624
COPA coatomer protein complex, subunit alpha -0.0339349
VMP1 vacuole membrane protein 1 -0.033687
PSD3 pleckstrin and Sec7 domain containing 3 -0.0335634
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila) -0.0331072
ALCAM activated leukocyte cell adhesion molecule -0.0322933
NRG1 neuregulin 1 -0.0322225
RBM25 RNA binding motif protein 25 -0.0320677
RPL9 ribosomal protein L9 -0.0306654
EFNB2 ephrin-B2 -0.0305222
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0304761
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) -0.0295563
NOS1AP nitric oxide synthase 1 (neuronal) adaptor protein -0.0291024
SMYD3 SET and MYND domain containing 3 -0.0290102
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.0287489
TJP1 tight junction protein 1 -0.028418
RPL37 ribosomal protein L37 -0.0283706
UBB ubiquitin B -0.0278708
RPS12 ribosomal protein S12 -0.0276706
HSPE1 heat shock 10kDa protein 1 -0.026444
HSPA6 heat shock 70kDa protein 6 (HSP70B') -0.0257579
CSNK1A1 casein kinase 1, alpha 1 -0.0252231
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0249359
BRD4 bromodomain containing 4 -0.0249357
DIAPH1 diaphanous-related formin 1 -0.0249254
LDHA lactate dehydrogenase A -0.0247275
MAML2 mastermind-like 2 (Drosophila) -0.0242647
ACTN4 actinin, alpha 4 -0.0238655
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 -0.0236524
RIGI RNA sensor RIG-I -0.0235474
GPHN gephyrin -0.0234603
ILF3 interleukin enhancer binding factor 3, 90kDa -0.0226079
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0219893
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.021722
PDE4D phosphodiesterase 4D, cAMP-specific -0.0208089
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0205692
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0201852
KMT2E lysine (K)-specific methyltransferase 2E -0.020169
NF1 neurofibromin 1 -0.0200716
AFF4 AF4/FMR2 family, member 4 -0.0193321
DST dystonin -0.0190057
PDLIM5 PDZ and LIM domain 5 -0.0189042
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.018809
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0187303
HSPA4 heat shock 70kDa protein 4 -0.0181958
SLC38A1 solute carrier family 38, member 1 -0.0181544