Bortezomib_NCI-H460 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bortezomib perturbation in NCI-H460 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bortezomib_NCI-H460 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.194186
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.123451
UBC ubiquitin C 0.0760081
PDE4D phosphodiesterase 4D, cAMP-specific 0.0650901
HSPA8 heat shock 70kDa protein 8 0.0578714
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0573908
TUSC3 tumor suppressor candidate 3 0.0482103
GNGT1 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 0.0469256
KIF21A kinesin family member 21A 0.0434853
SQSTM1 sequestosome 1 0.0433936
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0399152
NIBAN1 niban apoptosis regulator 1 0.0386875
UBR3 ubiquitin protein ligase E3 component n-recognin 3 (putative) 0.0351559
HSPA1A heat shock 70kDa protein 1A 0.0336055
MAP1B microtubule-associated protein 1B 0.0314218
ZSWIM6 zinc finger, SWIM-type containing 6 0.0312819
EXOC6B exocyst complex component 6B 0.0290463
TBCA tubulin folding cofactor A 0.0283738
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0281327
WARS1 tryptophanyl-tRNA synthetase 1 0.0264704
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0261569
PDLIM5 PDZ and LIM domain 5 0.0255952
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0255302
RPS6KC1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 0.0249882
EEF2 eukaryotic translation elongation factor 2 0.0248947
PDE10A phosphodiesterase 10A 0.0243247
CTIF CBP80/20-dependent translation initiation factor 0.024114
CREB5 cAMP responsive element binding protein 5 0.023416
PSMD1 proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 0.0232321
MAP7 microtubule-associated protein 7 0.0228887
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0228547
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0228462
PCDHB16 protocadherin beta 16 0.0228089
BICD1 bicaudal D homolog 1 (Drosophila) 0.022746
RSAD2 radical S-adenosyl methionine domain containing 2 0.0226528
SH3KBP1 SH3-domain kinase binding protein 1 0.0226037
SNX29 sorting nexin 29 0.0225775
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0223014
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.022143
DLGAP3 discs, large (Drosophila) homolog-associated protein 3 0.0220168
SMYD3 SET and MYND domain containing 3 0.021682
CD44 CD44 molecule (Indian blood group) 0.0211669
FAM219A family with sequence similarity 219, member A 0.0207855
VTI1A vesicle transport through interaction with t-SNAREs 1A 0.0203647
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0202609
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 0.0201329
HSPA1B heat shock 70kDa protein 1B 0.0198079
ATP9B ATPase, class II, type 9B 0.0197885
CHCHD3 coiled-coil-helix-coiled-coil-helix domain containing 3 0.0196383
CDH13 cadherin 13 0.0193155
DHRSX dehydrogenase/reductase (SDR family) X-linked 0.0192717
EXT1 exostosin glycosyltransferase 1 0.0192541
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.0192299
LRP1B low density lipoprotein receptor-related protein 1B 0.0191427
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0186451
CLIP1 CAP-GLY domain containing linker protein 1 0.0182938
MACF1 microtubule-actin crosslinking factor 1 0.0181978
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0179996
GPATCH2L G patch domain containing 2-like 0.0176598
RPTOR regulatory associated protein of MTOR, complex 1 0.0175443
UBQLN1 ubiquilin 1 0.0174971
SOD2 superoxide dismutase 2, mitochondrial 0.0173542
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0172531
DENND1A DENN/MADD domain containing 1A 0.0172274
HSD17B12 hydroxysteroid (17-beta) dehydrogenase 12 0.0172157
GPATCH2 G patch domain containing 2 0.0169637
FMNL2 formin-like 2 0.0169263
ABCC2 ATP-binding cassette, sub-family C (CFTR/MRP), member 2 0.0167603
AGTPBP1 ATP/GTP binding protein 1 0.0165655
EXOC4 exocyst complex component 4 0.0164814
ECPAS Ecm29 proteasome adaptor and scaffold 0.0163899
NPLOC4 nuclear protein localization 4 homolog (S. cerevisiae) 0.0160408
SMAD2 SMAD family member 2 0.0158765
TFDP2 transcription factor Dp-2 (E2F dimerization partner 2) 0.0158296
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0156121
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0154133
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0153473
INTS6 integrator complex subunit 6 0.0149989
MYO10 myosin X 0.0149323
ADGRD1 adhesion G protein-coupled receptor D1 0.0148556
DNAJB1 DnaJ (Hsp40) homolog, subfamily B, member 1 0.0144031
DST dystonin 0.0143965
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta 0.0142472
PRKN parkin RBR E3 ubiquitin protein ligase 0.0141323
MTAP methylthioadenosine phosphorylase 0.0141212
VCP valosin containing protein 0.0140357
KIF1B kinesin family member 1B 0.0139723
NCAM1 neural cell adhesion molecule 1 0.0138761
DPP10 dipeptidyl-peptidase 10 (non-functional) 0.0138097
FLNA filamin A, alpha 0.0137716
TPM3 tropomyosin 3 0.0137468
LARP4 La ribonucleoprotein domain family, member 4 0.0137233
GRB10 growth factor receptor-bound protein 10 0.0136239
UCHL1 ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase) 0.0135783
NAA25 N(alpha)-acetyltransferase 25, NatB auxiliary subunit 0.0134805
AEBP2 AE binding protein 2 0.0132683
SPATS2 spermatogenesis associated, serine-rich 2 0.0131841
PAPPA2 pappalysin 2 0.0131725
KIAA1217 KIAA1217 0.013109
CXCL5 chemokine (C-X-C motif) ligand 5 0.0130595

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.132723
EFNA5 ephrin-A5 -0.0729628
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0695201
FTL ferritin, light polypeptide -0.0640718
PTMA prothymosin, alpha -0.0561503
TMSB10 thymosin beta 10 -0.0525684
VIM vimentin -0.0488418
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.0478281
IGFBP3 insulin-like growth factor binding protein 3 -0.0469657
FN1 fibronectin 1 -0.045081
NAMPT nicotinamide phosphoribosyltransferase -0.0417853
GDA guanine deaminase -0.0384939
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0381062
LIMCH1 LIM and calponin homology domains 1 -0.0374922
ELL2 elongation factor, RNA polymerase II, 2 -0.0372246
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0359902
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0335247
TFPI2 tissue factor pathway inhibitor 2 -0.0315041
EPB41L3 erythrocyte membrane protein band 4.1-like 3 -0.0312875
NEK7 NIMA-related kinase 7 -0.0307026
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0305178
FNDC3B fibronectin type III domain containing 3B -0.0299315
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0296475
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.029512
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0283358
MYOF myoferlin -0.0272855
GOLGA4 golgin A4 -0.0258615
PGK1 phosphoglycerate kinase 1 -0.0255
GNAS GNAS complex locus -0.0254929
RGS2 regulator of G-protein signaling 2 -0.0253704
OGA O-GlcNAcase -0.0252297
RPS6 ribosomal protein S6 -0.0252068
PDGFA platelet-derived growth factor alpha polypeptide -0.0248378
MFF mitochondrial fission factor -0.0247964
MCL1 myeloid cell leukemia 1 -0.0241749
KMT2E lysine (K)-specific methyltransferase 2E -0.0240477
S100A6 S100 calcium binding protein A6 -0.0237209
TOP2A topoisomerase (DNA) II alpha 170kDa -0.023506
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0231853
STC1 stanniocalcin 1 -0.0231244
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) -0.0230704
PDIA3 protein disulfide isomerase family A, member 3 -0.0227682
PDIA6 protein disulfide isomerase family A, member 6 -0.0227189
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0226729
RPL12 ribosomal protein L12 -0.022406
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0219587
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0212886
RTN4 reticulon 4 -0.0208
WDR45B WD repeat domain 45B -0.0206496
SLC39A8 solute carrier family 39 (zinc transporter), member 8 -0.0202726
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0202281
HILPDA hypoxia inducible lipid droplet-associated -0.0200053
MT2A metallothionein 2A -0.0199113
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.0198093
RPLP0 ribosomal protein, large, P0 -0.0194795
AGFG1 ArfGAP with FG repeats 1 -0.0191071
B2M beta-2-microglobulin -0.0190414
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0188244
SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 -0.0187921
TGFBI transforming growth factor, beta-induced, 68kDa -0.0186812
SLC38A1 solute carrier family 38, member 1 -0.0186702
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.018662
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0183689
LMAN1 lectin, mannose-binding, 1 -0.0182913
RPL35A ribosomal protein L35a -0.018012
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0177792
NRCAM neuronal cell adhesion molecule -0.0176897
ZNF292 zinc finger protein 292 -0.0176202
FAM13A family with sequence similarity 13, member A -0.0176191
NDRG1 N-myc downstream regulated 1 -0.0175827
CENPF centromere protein F, 350/400kDa -0.0175186
RPLP1 ribosomal protein, large, P1 -0.01749
EIF1 eukaryotic translation initiation factor 1 -0.0171849
RNF145 ring finger protein 145 -0.0171251
COL5A2 collagen, type V, alpha 2 -0.0170682
RPL37A ribosomal protein L37a -0.0170172
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0169636
NUP58 nucleoporin 58 -0.0168828
SLC38A2 solute carrier family 38, member 2 -0.0166477
RPL19 ribosomal protein L19 -0.0166225
S100A10 S100 calcium binding protein A10 -0.0165321
NPAS2 neuronal PAS domain protein 2 -0.016397
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0163718
PM20D1 peptidase M20 domain containing 1 -0.0163618
VDAC1 voltage-dependent anion channel 1 -0.0161668
DDIT4 DNA-damage-inducible transcript 4 -0.0161155
CRYAB crystallin, alpha B -0.0159609
PRKD3 protein kinase D3 -0.0158887
TENT5A terminal nucleotidyltransferase 5A -0.0158168
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0156228
RBM39 RNA binding motif protein 39 -0.0156182
DGKD diacylglycerol kinase, delta 130kDa -0.0155408
COPA coatomer protein complex, subunit alpha -0.0155354
MXI1 MAX interactor 1, dimerization protein -0.015411
LDHA lactate dehydrogenase A -0.0153595
ESYT2 extended synaptotagmin-like protein 2 -0.015327
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0153015
NQO1 NAD(P)H dehydrogenase, quinone 1 -0.0152988
LAMB1 laminin, beta 1 -0.0152313
SEPTIN7 septin 7 -0.0152026