Bortezomib_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bortezomib perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bortezomib_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSPA1A heat shock 70kDa protein 1A 0.0756449
HSPH1 heat shock 105kDa/110kDa protein 1 0.0348046
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0340797
COL3A1 collagen, type III, alpha 1 0.0309215
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0301466
HSPA8 heat shock 70kDa protein 8 0.0279293
PTGES3 prostaglandin E synthase 3 (cytosolic) 0.0263819
UBR3 ubiquitin protein ligase E3 component n-recognin 3 (putative) 0.0261713
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0259244
UBQLN1 ubiquilin 1 0.0258345
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0246101
STIP1 stress-induced phosphoprotein 1 0.023855
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.0235155
PSMA6 proteasome (prosome, macropain) subunit, alpha type, 6 0.0224125
HIBCH 3-hydroxyisobutyryl-CoA hydrolase 0.0223877
RPS2 ribosomal protein S2 0.0222197
MKI67 marker of proliferation Ki-67 0.0221774
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0218274
KIF21A kinesin family member 21A 0.0216296
AFF4 AF4/FMR2 family, member 4 0.0214714
DST dystonin 0.0202375
ISG15 ISG15 ubiquitin-like modifier 0.0190624
RAB6A RAB6A, member RAS oncogene family 0.0187875
TJP1 tight junction protein 1 0.0187643
JMJD1C jumonji domain containing 1C 0.0187535
SQSTM1 sequestosome 1 0.018678
ENO1 enolase 1, (alpha) 0.0182408
ACIN1 apoptotic chromatin condensation inducer 1 0.0180813
RPS6KC1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 0.0179836
KIF1B kinesin family member 1B 0.0179036
GOLGB1 golgin B1 0.0177695
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 0.0177689
HERC5 HECT and RLD domain containing E3 ubiquitin protein ligase 5 0.017761
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0177482
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0176928
PSMD1 proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 0.0173357
CUL4B cullin 4B 0.0171807
BRD2 bromodomain containing 2 0.0171477
VCP valosin containing protein 0.0169091
INO80D INO80 complex subunit D 0.0167179
VPS72 vacuolar protein sorting 72 homolog (S. cerevisiae) 0.0165529
NSUN6 NOP2/Sun domain family, member 6 0.0165207
FAM219A family with sequence similarity 219, member A 0.0164883
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.016353
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0161313
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 0.0160266
STK38L serine/threonine kinase 38 like 0.0159232
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0156177
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0155002
ALS2 amyotrophic lateral sclerosis 2 (juvenile) 0.0151906
VMP1 vacuole membrane protein 1 0.0149807
GCLM glutamate-cysteine ligase, modifier subunit 0.0149723
TARS1 threonyl-tRNA synthetase 1 0.0146534
FLNA filamin A, alpha 0.0144409
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0143775
EEF1G eukaryotic translation elongation factor 1 gamma 0.0142082
ZNF721 zinc finger protein 721 0.0142076
IRF2BP2 interferon regulatory factor 2 binding protein 2 0.0141455
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0141248
ICE1 interactor of little elongation complex ELL subunit 1 0.0138534
TBK1 TANK-binding kinase 1 0.0137297
XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) 0.0137186
ANKHD1 ankyrin repeat and KH domain containing 1 0.0136721
ANKRD17 ankyrin repeat domain 17 0.01367
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.013471
FAM177A1 family with sequence similarity 177, member A1 0.013455
EP300 E1A binding protein p300 0.0134126
NIBAN1 niban apoptosis regulator 1 0.0133568
EEF2 eukaryotic translation elongation factor 2 0.0130314
CCT6A chaperonin containing TCP1, subunit 6A (zeta 1) 0.0130046
SERPINH1 serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1) 0.0129664
SOD1 superoxide dismutase 1, soluble 0.012959
RPS14 ribosomal protein S14 0.012924
PSMD11 proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 0.0129164
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0128524
SPAG9 sperm associated antigen 9 0.0128257
UTY ubiquitously transcribed tetratricopeptide repeat containing, Y-linked 0.0128172
PSMC6 proteasome (prosome, macropain) 26S subunit, ATPase, 6 0.0126391
INTS6 integrator complex subunit 6 0.0125482
EGLN3 egl-9 family hypoxia-inducible factor 3 0.0124667
YBX1 Y box binding protein 1 0.0124591
ZNFX1 zinc finger, NFX1-type containing 1 0.0124127
TTBK2 tau tubulin kinase 2 0.0123856
SPART spartin 0.0122562
ELOVL5 ELOVL fatty acid elongase 5 0.0122476
TSEN15 TSEN15 tRNA splicing endonuclease subunit 0.0122416
ASPH aspartate beta-hydroxylase 0.0121775
DLGAP3 discs, large (Drosophila) homolog-associated protein 3 0.0121646
PSMD8 proteasome (prosome, macropain) 26S subunit, non-ATPase, 8 0.0121407
HELB helicase (DNA) B 0.0121266
PSMD3 proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 0.0120771
CPED1 cadherin-like and PC-esterase domain containing 1 0.0120706
PSMB7 proteasome (prosome, macropain) subunit, beta type, 7 0.0120612
WWOX WW domain containing oxidoreductase 0.012009
FOXP2 forkhead box P2 0.0119412
EGFR epidermal growth factor receptor 0.0118485
EP400 E1A binding protein p400 0.011807
MYH14 myosin, heavy chain 14, non-muscle 0.0118005
JAZF1 JAZF zinc finger 1 0.0116725
SLC20A2 solute carrier family 20 (phosphate transporter), member 2 0.0116112

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.11657
COL11A1 collagen, type XI, alpha 1 -0.0818422
ERBB4 erb-b2 receptor tyrosine kinase 4 -0.0814671
PHIP pleckstrin homology domain interacting protein -0.0730047
CDH10 cadherin 10, type 2 (T2-cadherin) -0.0691843
CDH6 cadherin 6, type 2, K-cadherin (fetal kidney) -0.0691767
FNDC3B fibronectin type III domain containing 3B -0.0662103
TSC22D2 TSC22 domain family, member 2 -0.0627455
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.062478
PEG10 paternally expressed 10 -0.0624131
BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 -0.0535697
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0501237
GPC3 glypican 3 -0.0498634
PPP1R12A protein phosphatase 1, regulatory subunit 12A -0.0467473
NOP58 NOP58 ribonucleoprotein -0.0464744
ADGRL3 adhesion G protein-coupled receptor L3 -0.0457946
PCLO piccolo presynaptic cytomatrix protein -0.0436425
PLPP1 phospholipid phosphatase 1 -0.0435736
CTNNA3 catenin (cadherin-associated protein), alpha 3 -0.0433143
RAD51B RAD51 paralog B -0.0409174
STRN3 striatin, calmodulin binding protein 3 -0.039947
CTNNA2 catenin (cadherin-associated protein), alpha 2 -0.0380735
CHD1 chromodomain helicase DNA binding protein 1 -0.0378482
ZNF292 zinc finger protein 292 -0.0376404
ANKRD33B ankyrin repeat domain 33B -0.0376002
HS3ST5 heparan sulfate (glucosamine) 3-O-sulfotransferase 5 -0.0373943
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0373204
MRPS30 mitochondrial ribosomal protein S30 -0.0367752
PRR16 proline rich 16 -0.0356432
FTL ferritin, light polypeptide -0.035638
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats -0.0337717
NCOR1 nuclear receptor corepressor 1 -0.0333154
RFPL4B ret finger protein-like 4B -0.032185
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha -0.0319672
PGAP1 post-GPI attachment to proteins 1 -0.0317498
HMGA2 high mobility group AT-hook 2 -0.0314577
GALNTL6 polypeptide N-acetylgalactosaminyltransferase-like 6 -0.0314305
NRG1 neuregulin 1 -0.0314176
RBM39 RNA binding motif protein 39 -0.0311153
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 -0.0307791
MAP4 microtubule-associated protein 4 -0.0298653
RPL37A ribosomal protein L37a -0.0298239
MEIS2 Meis homeobox 2 -0.0295081
SHROOM3 shroom family member 3 -0.0289949
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0287048
HSPB1 heat shock 27kDa protein 1 -0.0283735
PFN1 profilin 1 -0.0283506
EMP1 epithelial membrane protein 1 -0.0274764
RPL12 ribosomal protein L12 -0.0272275
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0271107
ZFAND3 zinc finger, AN1-type domain 3 -0.0267908
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0265419
RPS16 ribosomal protein S16 -0.0265328
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0264439
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0264421
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0263688
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 -0.0261444
USP3 ubiquitin specific peptidase 3 -0.0251199
PPP4R1 protein phosphatase 4, regulatory subunit 1 -0.0248781
ADGRL2 adhesion G protein-coupled receptor L2 -0.0247213
ADGRV1 adhesion G protein-coupled receptor V1 -0.0246863
DNAJC1 DnaJ (Hsp40) homolog, subfamily C, member 1 -0.0246325
URI1 URI1, prefoldin-like chaperone -0.0245245
ZEB2 zinc finger E-box binding homeobox 2 -0.024125
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0239217
MTDH metadherin -0.0238708
SCAF11 SR-related CTD-associated factor 11 -0.0238375
PRAG1 PEAK1 related, kinase-activating pseudokinase 1 -0.0237389
SEC31A SEC31 homolog A (S. cerevisiae) -0.0235572
HS6ST2 heparan sulfate 6-O-sulfotransferase 2 -0.0231707
TRIO trio Rho guanine nucleotide exchange factor -0.0229285
KMT2E lysine (K)-specific methyltransferase 2E -0.0225411
PRRC2C proline-rich coiled-coil 2C -0.0220987
PICALM phosphatidylinositol binding clathrin assembly protein -0.0218905
SLC38A1 solute carrier family 38, member 1 -0.0218872
ZNF385D zinc finger protein 385D -0.0218502
PRELID2 PRELI domain containing 2 -0.0216882
FAT1 FAT atypical cadherin 1 -0.0216315
IGF1R insulin-like growth factor 1 receptor -0.0215186
LRRC4C leucine rich repeat containing 4C -0.0213729
METAP2 methionyl aminopeptidase 2 -0.0210763
RASAL2 RAS protein activator like 2 -0.0208718
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.0206735
UBC ubiquitin C -0.0204315
LAMC1 laminin, gamma 1 (formerly LAMB2) -0.0204113
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A -0.0204044
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0200969
ACBD3 acyl-CoA binding domain containing 3 -0.0199508
FBL fibrillarin -0.0199283
TBC1D12 TBC1 domain family, member 12 -0.0199056
WSB1 WD repeat and SOCS box containing 1 -0.0197306
NPAS3 neuronal PAS domain protein 3 -0.0196534
CDC50A cell division cycle 50 P4-ATPase accessory subunit A -0.0196521
CBFA2T2 core-binding factor, runt domain, alpha subunit 2; translocated to, 2 -0.0196148
CACYBP calcyclin binding protein -0.0196078
PTMA prothymosin, alpha -0.0195775
MYO10 myosin X -0.0195695
CBL Cbl proto-oncogene, E3 ubiquitin protein ligase -0.0194218
USP34 ubiquitin specific peptidase 34 -0.0193395
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0191421