Bosentan (hydrate)_KATO III Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bosentan (hydrate) perturbation in KATO III cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bosentan (hydrate)_KATO III drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GOLGA4 golgin A4 0.0303716
FAM13A family with sequence similarity 13, member A 0.0203294
AKAP9 A kinase (PRKA) anchor protein 9 0.0179575
TMF1 TATA element modulatory factor 1 0.0118909
TCEA1 transcription elongation factor A (SII), 1 0.011029
HELZ helicase with zinc finger 0.0107327
AVL9 AVL9 homolog (S. cerevisiase) 0.0105435
ESYT2 extended synaptotagmin-like protein 2 0.0101368
ZNF292 zinc finger protein 292 0.00982124
CLINT1 clathrin interactor 1 0.00968943
RPL21 ribosomal protein L21 0.00958572
NUS1 nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae) 0.009517
SLC35A3 solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3 0.00950903
SRP54 signal recognition particle 54kDa 0.0086859
SEC63 SEC63 homolog (S. cerevisiae) 0.0083885
SNX13 sorting nexin 13 0.00817963
SKIC3 SKI3 subunit of superkiller complex 0.00809763
YPEL5 yippee-like 5 (Drosophila) 0.00792325
CEP57 centrosomal protein 57kDa 0.00783208
RNF145 ring finger protein 145 0.00774008
KCNIP4 Kv channel interacting protein 4 0.00752651
SUCO SUN domain containing ossification factor 0.00745826
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa 0.00741107
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.00740328
TMEM39A transmembrane protein 39A 0.00714628
PGM3 phosphoglucomutase 3 0.00707885
CCDC186 coiled-coil domain containing 186 0.00707032
UBQLN1 ubiquilin 1 0.00692277
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0068353
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.00667024
GALNT3 polypeptide N-acetylgalactosaminyltransferase 3 0.0065246
NBAS neuroblastoma amplified sequence 0.00652021
NUP58 nucleoporin 58 0.00650903
CAPZA2 capping protein (actin filament) muscle Z-line, alpha 2 0.00643652
SLC31A1 solute carrier family 31 (copper transporter), member 1 0.00637382
ARRDC3 arrestin domain containing 3 0.00635185
COG6 component of oligomeric golgi complex 6 0.00632632
DIS3 DIS3 exosome endoribonuclease and 3'-5' exoribonuclease 0.00629434
SLK STE20-like kinase 0.00623916
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.00621676
CSTB cystatin B (stefin B) 0.00618447
SBDS Shwachman-Bodian-Diamond syndrome 0.00612888
CALCOCO2 calcium binding and coiled-coil domain 2 0.00606664
BCLAF1 BCL2-associated transcription factor 1 0.00602333
RNMT RNA (guanine-7-) methyltransferase 0.00595411
SPTY2D1 SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae) 0.00595215
ESCO1 establishment of sister chromatid cohesion N-acetyltransferase 1 0.00594947
ZRSR2 zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2 0.00591517
ALPK1 alpha-kinase 1 0.00583897
MIMS1 mitochondrial inner membrane scaffold 1 0.0058127
HILPDA hypoxia inducible lipid droplet-associated 0.00581027
NKTR natural killer cell triggering receptor 0.00578156
MBOAT2 membrane bound O-acyltransferase domain containing 2 0.00577761
RAB18 RAB18, member RAS oncogene family 0.00577496
RPS7 ribosomal protein S7 0.00572805
WDR48 WD repeat domain 48 0.00572774
USPL1 ubiquitin specific peptidase like 1 0.00572169
DNAJC25 DnaJ (Hsp40) homolog, subfamily C , member 25 0.00562536
TP53BP1 tumor protein p53 binding protein 1 0.00560615
PTEN phosphatase and tensin homolog 0.00560219
UBXN7 UBX domain protein 7 0.00551978
MSMO1 methylsterol monooxygenase 1 0.00546278
CIRSR corepressor of RBPJ and splicing regulator 0.00543572
RB1CC1 RB1-inducible coiled-coil 1 0.0054145
AGR3 anterior gradient 3 0.00538733
KLHDC10 kelch domain containing 10 0.00537685
TPR translocated promoter region, nuclear basket protein 0.00536828
PNN pinin, desmosome associated protein 0.00534222
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.00532668
STK17B serine/threonine kinase 17b 0.00529656
ADAM17 ADAM metallopeptidase domain 17 0.00528667
AKAP12 A kinase (PRKA) anchor protein 12 0.00528646
ZCCHC17 zinc finger, CCHC domain containing 17 0.00523784
UBA6 ubiquitin-like modifier activating enzyme 6 0.00522535
PTPRR protein tyrosine phosphatase, receptor type, R 0.00521401
CFAP36 cilia and flagella associated protein 36 0.00520735
DHX40 DEAH (Asp-Glu-Ala-His) box polypeptide 40 0.00519977
VIRMA vir like m6A methyltransferase associated 0.00519594
CCPG1 cell cycle progression 1 0.00519039
CPAP centrosome assembly and centriole elongation protein 0.00510399
SIAH1 siah E3 ubiquitin protein ligase 1 0.00508424
LYSMD3 LysM, putative peptidoglycan-binding, domain containing 3 0.0050798
THOC1 THO complex 1 0.00507118
MYADM myeloid-associated differentiation marker 0.0050652
UBA5 ubiquitin-like modifier activating enzyme 5 0.00504988
CKAP2L cytoskeleton associated protein 2-like 0.00504045
FTH1 ferritin, heavy polypeptide 1 0.00499331
KMT2E lysine (K)-specific methyltransferase 2E 0.00498043
NUCB2 nucleobindin 2 0.00495954
CREBRF CREB3 regulatory factor 0.00495645
UBE2E2 ubiquitin-conjugating enzyme E2E 2 0.00494112
POFUT2 protein O-fucosyltransferase 2 0.00492226
COPB1 coatomer protein complex, subunit beta 1 0.00490533
ZMYM6 zinc finger, MYM-type 6 0.00489876
C1GALT1 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 0.00489775
MINDY3 MINDY lysine 48 deubiquitinase 3 0.00489138
KDM2A lysine (K)-specific demethylase 2A 0.00488545
POLR2B polymerase (RNA) II (DNA directed) polypeptide B, 140kDa 0.00488282
GPATCH11 G patch domain containing 11 0.00483696
ZNF654 zinc finger protein 654 0.00483098

decreased expression

Symbol Name Standardized Value
FGFR2 fibroblast growth factor receptor 2 -0.389891
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.191455
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.15833
GMDS GDP-mannose 4,6-dehydratase -0.120619
TMSB10 thymosin beta 10 -0.11663
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.102832
LMO7 LIM domain 7 -0.0988844
EMP1 epithelial membrane protein 1 -0.0965105
ANXA2 annexin A2 -0.0935044
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0882809
CEMIP cell migration inducing protein, hyaluronan binding -0.0853952
AHNAK AHNAK nucleoprotein -0.0832075
ACTN4 actinin, alpha 4 -0.0814167
TPT1 tumor protein, translationally-controlled 1 -0.0808553
PTMA prothymosin, alpha -0.0807077
FLNB filamin B, beta -0.0728933
CALR calreticulin -0.0724503
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0720549
PDIA4 protein disulfide isomerase family A, member 4 -0.0709119
KRT8 keratin 8, type II -0.0672656
TMC5 transmembrane channel-like 5 -0.0626936
EZR ezrin -0.0600822
UBC ubiquitin C -0.0578467
MAML2 mastermind-like 2 (Drosophila) -0.0574951
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) -0.0564528
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 -0.0564438
B2M beta-2-microglobulin -0.0556065
BCL2L1 BCL2-like 1 -0.0549127
H1-0 H1.0 linker histone -0.0541952
FAT1 FAT atypical cadherin 1 -0.0505369
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.049909
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0490154
RNF213 ring finger protein 213 -0.0486711
NPSR1 neuropeptide S receptor 1 -0.0484055
TM4SF1 transmembrane 4 L six family member 1 -0.0477064
ATF7IP2 activating transcription factor 7 interacting protein 2 -0.0474868
SEPTIN9 septin 9 -0.046204
PKM pyruvate kinase, muscle -0.0455353
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0444082
ASPH aspartate beta-hydroxylase -0.0439381
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.04347
ITGA6 integrin, alpha 6 -0.042719
EPCAM epithelial cell adhesion molecule -0.0426172
RPS27A ribosomal protein S27a -0.0425838
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0408919
APLP2 amyloid beta (A4) precursor-like protein 2 -0.040574
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase -0.0393873
PTPRK protein tyrosine phosphatase, receptor type, K -0.0388872
RUNX1 runt-related transcription factor 1 -0.0388249
MCU mitochondrial calcium uniporter -0.0384169
CTNND1 catenin (cadherin-associated protein), delta 1 -0.0374967
MYOF myoferlin -0.037393
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.036423
CMIP c-Maf inducing protein -0.0362875
LOC112694756 uncharaterized LOC112694756 -0.0361416
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 -0.0360236
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0359334
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0355625
RPL23 ribosomal protein L23 -0.0353392
SLC38A2 solute carrier family 38, member 2 -0.0348368
MYH9 myosin, heavy chain 9, non-muscle -0.0347184
EHBP1 EH domain binding protein 1 -0.0343953
PGK1 phosphoglycerate kinase 1 -0.0342909
ST14 suppression of tumorigenicity 14 (colon carcinoma) -0.0342372
KRT18 keratin 18, type I -0.0339606
MYO1E myosin IE -0.0338943
RPS3 ribosomal protein S3 -0.0338027
ANKRD11 ankyrin repeat domain 11 -0.0336046
CTBP2 C-terminal binding protein 2 -0.0335132
AHR aryl hydrocarbon receptor -0.0334021
VMP1 vacuole membrane protein 1 -0.033028
S100A10 S100 calcium binding protein A10 -0.0328848
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0328746
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 -0.032723
PRKCA protein kinase C, alpha -0.0326642
RAB7A RAB7A, member RAS oncogene family -0.0326463
HLA-E major histocompatibility complex, class I, E -0.0324797
SLC20A2 solute carrier family 20 (phosphate transporter), member 2 -0.0323555
DOCK5 dedicator of cytokinesis 5 -0.0318033
EIF4A2 eukaryotic translation initiation factor 4A2 -0.0315721
GNAS GNAS complex locus -0.031536
CANX calnexin -0.0306031
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.030459
ACTG1 actin gamma 1 -0.0302764
ENO1 enolase 1, (alpha) -0.03009
PLEC plectin -0.0297798
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0296979
CUX1 cut-like homeobox 1 -0.0295974
HLA-A major histocompatibility complex, class I, A -0.029589
CD2AP CD2-associated protein -0.0295093
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 -0.0293759
ITGB4 integrin, beta 4 -0.029366
IFI6 interferon, alpha-inducible protein 6 -0.0292483
VCL vinculin -0.0292304
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0292286
TPM4 tropomyosin 4 -0.0290204
STAT1 signal transducer and activator of transcription 1, 91kDa -0.028821
UBASH3B ubiquitin associated and SH3 domain containing B -0.0287014
KRT7 keratin 7, type II -0.0286323
FBXO11 F-box protein 11 -0.0285794