Bosentan (hydrate)_LoVo Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bosentan (hydrate) perturbation in LoVo cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bosentan (hydrate)_LoVo drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.130395
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.129321
GOLGA4 golgin A4 0.110051
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.102919
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0984393
EPS8 epidermal growth factor receptor pathway substrate 8 0.0964822
PRELID2 PRELI domain containing 2 0.0738572
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0675736
ZNF292 zinc finger protein 292 0.0591255
CANX calnexin 0.0542902
MON2 MON2 homolog (S. cerevisiae) 0.052097
AKAP9 A kinase (PRKA) anchor protein 9 0.0498881
BTBD9 BTB (POZ) domain containing 9 0.0457588
KMT2C lysine (K)-specific methyltransferase 2C 0.0454201
ZFAND3 zinc finger, AN1-type domain 3 0.0450029
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0415335
PTEN phosphatase and tensin homolog 0.0413137
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0411815
CDK19 cyclin-dependent kinase 19 0.0407821
OGA O-GlcNAcase 0.0405401
RFX3 regulatory factor X, 3 (influences HLA class II expression) 0.0401257
MED13L mediator complex subunit 13-like 0.0397599
TMF1 TATA element modulatory factor 1 0.039611
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0393366
EREG epiregulin 0.0391993
CCPG1 cell cycle progression 1 0.038408
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0376983
NKTR natural killer cell triggering receptor 0.03697
BIRC6 baculoviral IAP repeat containing 6 0.0369314
PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 0.0363313
COG5 component of oligomeric golgi complex 5 0.0356143
RB1CC1 RB1-inducible coiled-coil 1 0.0354618
CSTPP1 centriolar satellite-associated tubulin polyglutamylase complex regulator 1 0.0354553
USP3 ubiquitin specific peptidase 3 0.0351826
GARS1 glycyl-tRNA synthetase 1 0.0347503
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha 0.0346152
CDC42SE2 CDC42 small effector 2 0.0338185
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa 0.033787
ESYT2 extended synaptotagmin-like protein 2 0.0328292
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0325294
NIPBL Nipped-B homolog (Drosophila) 0.0314868
KIF5B kinesin family member 5B 0.0311459
ASCC3 activating signal cointegrator 1 complex subunit 3 0.030547
UBA6 ubiquitin-like modifier activating enzyme 6 0.0303846
HERC1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 0.0291627
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.02908
ACBD3 acyl-CoA binding domain containing 3 0.0289053
EIF4B eukaryotic translation initiation factor 4B 0.0286125
CLINT1 clathrin interactor 1 0.0285759
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0285606
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0279228
DSCAM Down syndrome cell adhesion molecule 0.0278046
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 0.0274946
XPO1 exportin 1 0.0272008
BBX bobby sox homolog (Drosophila) 0.0271847
ADAM10 ADAM metallopeptidase domain 10 0.0267504
FAM13A family with sequence similarity 13, member A 0.0266654
RNF145 ring finger protein 145 0.0266645
RLF rearranged L-myc fusion 0.0265642
NAP1L1 nucleosome assembly protein 1-like 1 0.0265085
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0264726
CARD16 caspase recruitment domain family, member 16 0.0260952
EPRS1 glutamyl-prolyl-tRNA synthetase 1 0.0260532
MYO6 myosin VI 0.0259475
KDM2A lysine (K)-specific demethylase 2A 0.0258656
HELZ helicase with zinc finger 0.0255654
PRRC2C proline-rich coiled-coil 2C 0.0255152
ARHGAP5 Rho GTPase activating protein 5 0.0252708
USP34 ubiquitin specific peptidase 34 0.0251058
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0250589
ATXN1 ataxin 1 0.0249576
MINDY2 MINDY lysine 48 deubiquitinase 2 0.024766
CSDE1 cold shock domain containing E1, RNA-binding 0.0246921
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.024481
ZFC3H1 zinc finger, C3H1-type containing 0.0244767
LRRC1 leucine rich repeat containing 1 0.0244533
AP3B1 adaptor-related protein complex 3, beta 1 subunit 0.0243962
MLEC malectin 0.0242551
PDIA3 protein disulfide isomerase family A, member 3 0.024192
SLCO1B3 solute carrier organic anion transporter family, member 1B3 0.0241613
PTBP3 polypyrimidine tract binding protein 3 0.0241561
SUCO SUN domain containing ossification factor 0.0237567
ESRP1 epithelial splicing regulatory protein 1 0.0236883
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0236124
CEP350 centrosomal protein 350kDa 0.0235106
SNX13 sorting nexin 13 0.0233816
CALU calumenin 0.0233405
PAN3 PAN3 poly(A) specific ribonuclease subunit 0.0233302
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.0232031
MXI1 MAX interactor 1, dimerization protein 0.0231087
JMY junction mediating and regulatory protein, p53 cofactor 0.0231081
PHF3 PHD finger protein 3 0.0230047
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.0228739
PSAT1 phosphoserine aminotransferase 1 0.0228032
PJA2 praja ring finger 2, E3 ubiquitin protein ligase 0.0227604
NUP58 nucleoporin 58 0.0226783
POU2F1 POU class 2 homeobox 1 0.0224886
ANO6 anoctamin 6 0.0224267
PNISR PNN-interacting serine/arginine-rich protein 0.0223001
LARGE1 LARGE xylosyl- and glucuronyltransferase 1 0.0221994

decreased expression

Symbol Name Standardized Value
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.245181
LMO7 LIM domain 7 -0.138765
ANXA2 annexin A2 -0.122971
MYO1E myosin IE -0.118368
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.10728
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0982529
THSD4 thrombospondin, type I, domain containing 4 -0.0790403
FLNB filamin B, beta -0.0753974
EZR ezrin -0.0717175
MX1 MX dynamin-like GTPase 1 -0.0658362
PKM pyruvate kinase, muscle -0.0653194
ACTG1 actin gamma 1 -0.0647951
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.063762
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0602517
RIGI RNA sensor RIG-I -0.0597228
RNF213 ring finger protein 213 -0.0594249
PTPRB protein tyrosine phosphatase, receptor type, B -0.0586302
RIMKLB ribosomal modification protein rimK-like family member B -0.0583505
MPRIP myosin phosphatase Rho interacting protein -0.0581047
ACTN4 actinin, alpha 4 -0.0527048
SP100 SP100 nuclear antigen -0.0510435
VCL vinculin -0.0494483
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0491103
LGR5 leucine-rich repeat containing G protein-coupled receptor 5 -0.0490472
CATSPERB catsper channel auxiliary subunit beta -0.0478485
LAMA4 laminin, alpha 4 -0.0463492
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme -0.0463202
RPLP1 ribosomal protein, large, P1 -0.046276
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 -0.0461621
FBXO11 F-box protein 11 -0.0457159
SLC38A2 solute carrier family 38, member 2 -0.044193
OXSR1 oxidative stress responsive 1 -0.0435518
PDE4D phosphodiesterase 4D, cAMP-specific -0.0428348
EGR1 early growth response 1 -0.042429
SLCO1B3-SLCO1B7 SLCO1B3-SLCO1B7 readthrough -0.0422302
ITGA6 integrin, alpha 6 -0.0421658
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0421639
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0414222
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0413901
PALLD palladin, cytoskeletal associated protein -0.040594
CLDN4 claudin 4 -0.0400647
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0399733
INTS6 integrator complex subunit 6 -0.0397002
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0395636
PDLIM5 PDZ and LIM domain 5 -0.0391788
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0385995
MUC13 mucin 13, cell surface associated -0.0383376
SERINC5 serine incorporator 5 -0.0383287
F3 coagulation factor III (thromboplastin, tissue factor) -0.0377985
SPINK13 serine peptidase inhibitor, Kazal type 13 (putative) -0.037765
SPON1 spondin 1, extracellular matrix protein -0.0372301
CYSTM1 cysteine-rich transmembrane module containing 1 -0.0368942
ITGB4 integrin, beta 4 -0.0358204
TC2N tandem C2 domains, nuclear -0.035707
DIAPH1 diaphanous-related formin 1 -0.0356902
P3H2 prolyl 3-hydroxylase 2 -0.0349796
RCOR1 REST corepressor 1 -0.0333095
EPHA2 EPH receptor A2 -0.033145
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0327976
NABP1 nucleic acid binding protein 1 -0.0324442
PRSS3 protease, serine, 3 -0.032243
MYOF myoferlin -0.0320297
PLSCR1 phospholipid scramblase 1 -0.0317004
MYO5B myosin VB -0.0316684
MYH14 myosin, heavy chain 14, non-muscle -0.0315531
NT5C2 5'-nucleotidase, cytosolic II -0.0315268
RPS19 ribosomal protein S19 -0.0313852
GMDS GDP-mannose 4,6-dehydratase -0.0313215
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0312419
B4GALNT3 beta-1,4-N-acetyl-galactosaminyl transferase 3 -0.0309207
CEMIP cell migration inducing protein, hyaluronan binding -0.030718
CLIC5 chloride intracellular channel 5 -0.0302379
OAS3 2'-5'-oligoadenylate synthetase 3, 100kDa -0.0301137
MX2 MX dynamin-like GTPase 2 -0.0299467
IFI6 interferon, alpha-inducible protein 6 -0.0298925
HLA-B major histocompatibility complex, class I, B -0.0297712
MT2A metallothionein 2A -0.0296061
C6ORF132 chromosome 6 open reading frame 132 -0.0295722
OGDH oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) -0.0293335
UBAP2 ubiquitin associated protein 2 -0.0292461
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0291868
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 -0.0291312
CUX1 cut-like homeobox 1 -0.0283813
TMSB10 thymosin beta 10 -0.028313
CALB1 calbindin 1, 28kDa -0.0281292
FRMD5 FERM domain containing 5 -0.0279508
TNRC18 trinucleotide repeat containing 18 -0.0276672
CTBP2 C-terminal binding protein 2 -0.0274949
KRT18 keratin 18, type I -0.0273869
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.0268243
FUS FUS RNA binding protein -0.0266225
TJP1 tight junction protein 1 -0.0264001
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0263235
RAP1B RAP1B, member of RAS oncogene family -0.0263184
LAMB3 laminin, beta 3 -0.0262592
RHPN2 rhophilin, Rho GTPase binding protein 2 -0.0262411
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.025824
SLC6A20 solute carrier family 6 (proline IMINO transporter), member 20 -0.025658
POTEF POTE ankyrin domain family, member F -0.025652
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.0252576