Bosentan (hydrate)_MIA PaCa-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bosentan (hydrate) perturbation in MIA PaCa-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bosentan (hydrate)_MIA PaCa-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0665564
ERRFI1 ERBB receptor feedback inhibitor 1 0.0495202
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0319162
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0301042
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.02712
NUP58 nucleoporin 58 0.0268668
PRELID2 PRELI domain containing 2 0.0245966
ARRDC3 arrestin domain containing 3 0.024495
EREG epiregulin 0.0240591
RPS2 ribosomal protein S2 0.0234323
TPM3 tropomyosin 3 0.0213959
HMGB2 high mobility group box 2 0.021227
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0205781
SPAG9 sperm associated antigen 9 0.0203816
KMT2E lysine (K)-specific methyltransferase 2E 0.0196695
RPL23 ribosomal protein L23 0.019161
RPL21 ribosomal protein L21 0.0188079
KLF6 Kruppel-like factor 6 0.0187084
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0175313
CXCL8 chemokine (C-X-C motif) ligand 8 0.0167777
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0167316
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0167112
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0158638
ADAM17 ADAM metallopeptidase domain 17 0.0150033
BCLAF1 BCL2-associated transcription factor 1 0.0147571
ANKRD36 ankyrin repeat domain 36 0.0140648
RSRC2 arginine/serine-rich coiled-coil 2 0.0137116
KLHL15 kelch-like family member 15 0.0136554
RPS12 ribosomal protein S12 0.0136553
CCNL1 cyclin L1 0.0135653
MATR3 matrin 3 0.0134496
TNFRSF10D tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain 0.013321
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0131717
RPS7 ribosomal protein S7 0.012508
DDIT4 DNA-damage-inducible transcript 4 0.0122172
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0121082
EIF5 eukaryotic translation initiation factor 5 0.0120293
PRDX1 peroxiredoxin 1 0.0120236
GNAI3 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 0.0120216
APLP2 amyloid beta (A4) precursor-like protein 2 0.0119796
TMEM41B transmembrane protein 41B 0.0119101
ANP32B acidic (leucine-rich) nuclear phosphoprotein 32 family, member B 0.0119064
RPL18 ribosomal protein L18 0.0118909
SEPTIN7 septin 7 0.0115548
PLIN2 perilipin 2 0.0114885
SLK STE20-like kinase 0.0113864
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0113107
PNN pinin, desmosome associated protein 0.0110487
OPTN optineurin 0.0110297
CLEC1B C-type lectin domain family 1, member B 0.0106302
AKAP12 A kinase (PRKA) anchor protein 12 0.0106239
RPL3 ribosomal protein L3 0.0105394
MIMS1 mitochondrial inner membrane scaffold 1 0.0104961
FUT11 fucosyltransferase 11 (alpha (1,3) fucosyltransferase) 0.0104776
FXR1 fragile X mental retardation, autosomal homolog 1 0.0103899
ANXA1 annexin A1 0.0103773
MT2A metallothionein 2A 0.0103334
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta 0.0102724
RPS18 ribosomal protein S18 0.0102399
CRYBG3 beta-gamma crystallin domain containing 3 0.0101597
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.010143
PDK3 pyruvate dehydrogenase kinase, isozyme 3 0.0101077
MIDEAS mitotic deacetylase associated SANT domain protein 0.00984579
TAC4 tachykinin 4 (hemokinin) 0.00984036
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.00975166
ZC3H15 zinc finger CCCH-type containing 15 0.00972354
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0097197
CSF1 colony stimulating factor 1 (macrophage) 0.00964977
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.00952332
RRM2 ribonucleotide reductase M2 0.00950992
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.00945757
HILPDA hypoxia inducible lipid droplet-associated 0.00931459
CRY1 cryptochrome circadian clock 1 0.00931172
GLS2 glutaminase 2 (liver, mitochondrial) 0.00927275
SDC4 syndecan 4 0.00927193
ADAM9 ADAM metallopeptidase domain 9 0.00926691
HDGF hepatoma-derived growth factor 0.00917514
RPL17-C18ORF32 RPL17-C18orf32 readthrough 0.00904775
GMCL1 germ cell-less, spermatogenesis associated 1 0.00900134
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.00896112
QKI QKI, KH domain containing, RNA binding 0.00889565
CAPZA2 capping protein (actin filament) muscle Z-line, alpha 2 0.0088283
UBA5 ubiquitin-like modifier activating enzyme 5 0.0088177
PDE8A phosphodiesterase 8A 0.00879052
PPME1 protein phosphatase methylesterase 1 0.00878908
MTF2 metal response element binding transcription factor 2 0.00877347
TOP2B topoisomerase (DNA) II beta 180kDa 0.00875114
RNASE1 ribonuclease, RNase A family, 1 (pancreatic) 0.00870584
MSN moesin 0.00867418
SRSF4 serine/arginine-rich splicing factor 4 0.00860777
RIOK3 RIO kinase 3 0.00858241
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.00857961
RBM17 RNA binding motif protein 17 0.00850953
RNPS1 RNA binding protein S1, serine-rich domain 0.00840291
SET SET nuclear proto-oncogene 0.008285
INSIG2 insulin induced gene 2 0.00818354
FGFR1OP2 FGFR1 oncogene partner 2 0.00817772
PEX3 peroxisomal biogenesis factor 3 0.00813322
YBX1 Y box binding protein 1 0.00808525
CXCL1 chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha) 0.0080035

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.24407
CD44 CD44 molecule (Indian blood group) -0.1885
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.171223
PSD3 pleckstrin and Sec7 domain containing 3 -0.143087
TP63 tumor protein p63 -0.140734
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.126939
DLG1 discs, large homolog 1 (Drosophila) -0.114374
VIM vimentin -0.113095
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.112712
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.103877
EHBP1 EH domain binding protein 1 -0.0958737
RIGI RNA sensor RIG-I -0.081622
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0810114
APP amyloid beta (A4) precursor protein -0.0776173
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.0769933
BCAR3 breast cancer anti-estrogen resistance 3 -0.0734982
AHNAK AHNAK nucleoprotein -0.0723953
HLA-B major histocompatibility complex, class I, B -0.071725
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0702433
WARS1 tryptophanyl-tRNA synthetase 1 -0.0675315
DPYD dihydropyrimidine dehydrogenase -0.0672792
ACTG1 actin gamma 1 -0.0659721
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0606693
CMIP c-Maf inducing protein -0.0604272
ZDHHC14 zinc finger, DHHC-type containing 14 -0.0602906
RUNX1 runt-related transcription factor 1 -0.059322
PTMA prothymosin, alpha -0.058175
TNS3 tensin 3 -0.056546
ARHGAP5 Rho GTPase activating protein 5 -0.0545104
RPL35A ribosomal protein L35a -0.0541503
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0536432
MACF1 microtubule-actin crosslinking factor 1 -0.0524823
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0520097
RNF213 ring finger protein 213 -0.051819
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0516262
TSC22D1 TSC22 domain family, member 1 -0.0507557
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0507319
EPHA4 EPH receptor A4 -0.0504289
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0501609
FMNL2 formin-like 2 -0.0501191
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0496473
TM4SF1 transmembrane 4 L six family member 1 -0.0487514
CFAP299 cilia and flagella associated protein 299 -0.0487224
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0484049
EXOC4 exocyst complex component 4 -0.0477008
DST dystonin -0.0474909
SLC38A2 solute carrier family 38, member 2 -0.0473267
WWTR1 WW domain containing transcription regulator 1 -0.0472355
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.0463538
SP100 SP100 nuclear antigen -0.0463452
ANKRD11 ankyrin repeat domain 11 -0.0458937
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0454506
IFIH1 interferon induced with helicase C domain 1 -0.045162
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.0450872
TXNRD1 thioredoxin reductase 1 -0.0449342
PTPRF protein tyrosine phosphatase, receptor type, F -0.0440427
LPP LIM domain containing preferred translocation partner in lipoma -0.0439985
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 -0.0439465
HDLBP high density lipoprotein binding protein -0.0432835
FTL ferritin, light polypeptide -0.0432616
CADM2 cell adhesion molecule 2 -0.0430715
RPL31 ribosomal protein L31 -0.0427424
ZMYND8 zinc finger, MYND-type containing 8 -0.0422098
PRRC2B proline-rich coiled-coil 2B -0.0421455
TTC3 tetratricopeptide repeat domain 3 -0.0417197
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0411816
CANX calnexin -0.0404966
EFNA5 ephrin-A5 -0.0398808
TPT1 tumor protein, translationally-controlled 1 -0.0396092
DNER delta/notch-like EGF repeat containing -0.03959
RAD51B RAD51 paralog B -0.0394699
TRIO trio Rho guanine nucleotide exchange factor -0.0393008
HMGA1 high mobility group AT-hook 1 -0.0391312
SDCCAG8 serologically defined colon cancer antigen 8 -0.0391276
RPS29 ribosomal protein S29 -0.0388308
PTK2 protein tyrosine kinase 2 -0.0385983
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0382313
ADGRG6 adhesion G protein-coupled receptor G6 -0.0376002
LOXL2 lysyl oxidase-like 2 -0.0373129
PDE10A phosphodiesterase 10A -0.0372121
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0369983
VCL vinculin -0.0369428
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0367061
TRIP12 thyroid hormone receptor interactor 12 -0.0363286
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.036181
THOC2 THO complex 2 -0.0360225
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0357873
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0353201
PODXL podocalyxin-like -0.0348544
RAB27B RAB27B, member RAS oncogene family -0.034614
GLG1 golgi glycoprotein 1 -0.0344859
MAP4 microtubule-associated protein 4 -0.0344238
KPNB1 karyopherin (importin) beta 1 -0.034423
PGK1 phosphoglycerate kinase 1 -0.0343342
NF1 neurofibromin 1 -0.0338273
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0338188
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 -0.0331388
VDAC1 voltage-dependent anion channel 1 -0.0326931
RPS23 ribosomal protein S23 -0.0326266
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0325641