Bosentan (hydrate)_NCI-H1573 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bosentan (hydrate) perturbation in NCI-H1573 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bosentan (hydrate)_NCI-H1573 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0732537
ATP13A3 ATPase type 13A3 0.0623889
TES testin LIM domain protein 0.0569266
KDM6A lysine (K)-specific demethylase 6A 0.0548027
ARRDC3 arrestin domain containing 3 0.0540829
VMP1 vacuole membrane protein 1 0.0472804
MKI67 marker of proliferation Ki-67 0.0454158
CAPZA2 capping protein (actin filament) muscle Z-line, alpha 2 0.0375583
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0357944
YTHDC1 YTH domain containing 1 0.0354459
TBC1D22A TBC1 domain family, member 22A 0.0344143
SLC38A1 solute carrier family 38, member 1 0.0337488
GSK3B glycogen synthase kinase 3 beta 0.0335901
RUNX1 runt-related transcription factor 1 0.032352
NAMPT nicotinamide phosphoribosyltransferase 0.0321172
ADAM17 ADAM metallopeptidase domain 17 0.0316559
BLZF1 basic leucine zipper nuclear factor 1 0.0309611
NPTN neuroplastin 0.0304458
NEK7 NIMA-related kinase 7 0.0301265
ELL2 elongation factor, RNA polymerase II, 2 0.0299749
CCNL1 cyclin L1 0.0298685
HELZ helicase with zinc finger 0.0289947
NIPBL Nipped-B homolog (Drosophila) 0.0288649
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0286671
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0282782
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0281554
NUP58 nucleoporin 58 0.0280123
CHD1 chromodomain helicase DNA binding protein 1 0.027647
ZFAND3 zinc finger, AN1-type domain 3 0.0268847
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.0264908
NCOA2 nuclear receptor coactivator 2 0.0263255
SUCO SUN domain containing ossification factor 0.0262818
FNDC3B fibronectin type III domain containing 3B 0.0261736
RBM39 RNA binding motif protein 39 0.0259775
GPC6 glypican 6 0.0256821
BBX bobby sox homolog (Drosophila) 0.0255643
PTK2 protein tyrosine kinase 2 0.0253546
ZNF638 zinc finger protein 638 0.0249727
UBE2E2 ubiquitin-conjugating enzyme E2E 2 0.0248515
PTBP2 polypyrimidine tract binding protein 2 0.0248467
MYH9 myosin, heavy chain 9, non-muscle 0.0247871
TRA2A transformer 2 alpha homolog (Drosophila) 0.0246597
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.02448
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.0244419
ATP2C1 ATPase, Ca++ transporting, type 2C, member 1 0.0242395
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0241097
PPP1R15B protein phosphatase 1, regulatory subunit 15B 0.0240806
XPO1 exportin 1 0.0238524
DENND4A DENN/MADD domain containing 4A 0.0236195
USP9X ubiquitin specific peptidase 9, X-linked 0.0235367
RLF rearranged L-myc fusion 0.0234906
PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform 0.0226786
SAMD4A sterile alpha motif domain containing 4A 0.0226036
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0223731
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0222949
CXCL8 chemokine (C-X-C motif) ligand 8 0.0221355
PTPRJ protein tyrosine phosphatase, receptor type, J 0.0221045
ZNF654 zinc finger protein 654 0.0217834
DTNA dystrobrevin, alpha 0.0212425
ATAD2B ATPase family, AAA domain containing 2B 0.021195
RAD51B RAD51 paralog B 0.0210829
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0210739
MEF2A myocyte enhancer factor 2A 0.0209689
SERINC3 serine incorporator 3 0.020825
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0205928
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0205534
ERRFI1 ERBB receptor feedback inhibitor 1 0.0204972
RTN4 reticulon 4 0.0204796
JMJD1C jumonji domain containing 1C 0.0204033
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa 0.0202312
CUL3 cullin 3 0.0201604
CENPF centromere protein F, 350/400kDa 0.0198365
ARL5B ADP-ribosylation factor-like 5B 0.0197795
ARID2 AT rich interactive domain 2 (ARID, RFX-like) 0.0196406
FAM13A family with sequence similarity 13, member A 0.0195859
NCKAP1 NCK-associated protein 1 0.019539
KANSL1 KAT8 regulatory NSL complex subunit 1 0.0195351
TMF1 TATA element modulatory factor 1 0.0194675
ECT2 epithelial cell transforming 2 0.0194426
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.01933
ABI1 abl-interactor 1 0.0191876
SFPQ splicing factor proline/glutamine-rich 0.0191594
MARK3 MAP/microtubule affinity-regulating kinase 3 0.0191275
ARHGAP26 Rho GTPase activating protein 26 0.019115
IFNAR2 interferon (alpha, beta and omega) receptor 2 0.0190561
NDUFV2 NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa 0.0190077
WDPCP WD repeat containing planar cell polarity effector 0.0184933
MYO5B myosin VB 0.0183262
WAC WW domain containing adaptor with coiled-coil 0.0181572
UVRAG UV radiation resistance associated 0.0181241
VOPP1 vesicular, overexpressed in cancer, prosurvival protein 1 0.0180798
ALCAM activated leukocyte cell adhesion molecule 0.0179556
MED13L mediator complex subunit 13-like 0.017946
RALGAPA1 Ral GTPase activating protein, alpha subunit 1 (catalytic) 0.0179271
ZNF207 zinc finger protein 207 0.0179238
FBXW7 F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase 0.0178215
ZFC3H1 zinc finger, C3H1-type containing 0.0177497
POU2F1 POU class 2 homeobox 1 0.0176085
KIAA1328 KIAA1328 0.0175333
PUM2 pumilio RNA-binding family member 2 0.0174986

decreased expression

Symbol Name Standardized Value
EGFR epidermal growth factor receptor -0.33848
TMSB10 thymosin beta 10 -0.244394
NDRG1 N-myc downstream regulated 1 -0.159871
TXNRD1 thioredoxin reductase 1 -0.153575
RPS3 ribosomal protein S3 -0.144752
FTL ferritin, light polypeptide -0.144406
TPT1 tumor protein, translationally-controlled 1 -0.109415
MT2A metallothionein 2A -0.0975514
LAMC2 laminin, gamma 2 -0.0964771
CAV1 caveolin 1, caveolae protein, 22kDa -0.0912634
ASPH aspartate beta-hydroxylase -0.0881729
H1-0 H1.0 linker histone -0.0863406
RPL35A ribosomal protein L35a -0.0844408
AKR1C1 aldo-keto reductase family 1, member C1 -0.0833263
SEC61G Sec61 gamma subunit -0.0769574
RPL37A ribosomal protein L37a -0.0763736
PKM pyruvate kinase, muscle -0.0736354
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0717418
LAMA4 laminin, alpha 4 -0.0712758
PTMA prothymosin, alpha -0.0696522
SHANK2 SH3 and multiple ankyrin repeat domains 2 -0.063393
RPS12 ribosomal protein S12 -0.0616414
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.0609081
RPS8 ribosomal protein S8 -0.0601934
OSMR oncostatin M receptor -0.0601744
GRAMD1B GRAM domain containing 1B -0.0599158
PTPRM protein tyrosine phosphatase, receptor type, M -0.0588981
THSD4 thrombospondin, type I, domain containing 4 -0.057813
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) -0.0571775
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0566976
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 -0.055768
FTH1 ferritin, heavy polypeptide 1 -0.0556387
EGR1 early growth response 1 -0.0519445
RNF213 ring finger protein 213 -0.0515528
MKNK2 MAP kinase interacting serine/threonine kinase 2 -0.0496226
S100P S100 calcium binding protein P -0.048198
RPL34 ribosomal protein L34 -0.0480548
NABP1 nucleic acid binding protein 1 -0.0476826
LDHA lactate dehydrogenase A -0.0473719
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0472003
GCLC glutamate-cysteine ligase, catalytic subunit -0.0466597
ANXA2 annexin A2 -0.0458053
RPS27A ribosomal protein S27a -0.0452393
ACTG1 actin gamma 1 -0.0447645
IGFBP3 insulin-like growth factor binding protein 3 -0.0444944
LOC112694756 uncharaterized LOC112694756 -0.0443158
RPS27 ribosomal protein S27 -0.0442672
SQSTM1 sequestosome 1 -0.0439277
RPS25 ribosomal protein S25 -0.0432825
WASF2 WAS protein family, member 2 -0.0412693
LMO7 LIM domain 7 -0.0399618
CSTB cystatin B (stefin B) -0.0397452
PGK1 phosphoglycerate kinase 1 -0.0395063
DOCK5 dedicator of cytokinesis 5 -0.0393091
ANKRD12 ankyrin repeat domain 12 -0.0391601
RPLP1 ribosomal protein, large, P1 -0.0390199
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0381181
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0380046
HMGA1 high mobility group AT-hook 1 -0.0376215
B2M beta-2-microglobulin -0.0375041
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0374483
SEPTIN2 septin 2 -0.0372279
CD163L1 CD163 molecule-like 1 -0.0368059
RPS17 ribosomal protein S17 -0.0367441
CST3 cystatin C -0.0360063
AHNAK AHNAK nucleoprotein -0.0359664
MCL1 myeloid cell leukemia 1 -0.0351881
NPAS2 neuronal PAS domain protein 2 -0.035034
RPL26 ribosomal protein L26 -0.0341308
LGALS12 lectin, galactoside-binding, soluble, 12 -0.0341133
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0338663
DSCAM Down syndrome cell adhesion molecule -0.0336382
HM13 histocompatibility (minor) 13 -0.0334685
TMEM165 transmembrane protein 165 -0.0332779
SCEL sciellin -0.0331785
ZMYND8 zinc finger, MYND-type containing 8 -0.0328626
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0326544
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) -0.0325598
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0325002
RPL31 ribosomal protein L31 -0.0324799
KRT7 keratin 7, type II -0.0322127
LRP1B low density lipoprotein receptor-related protein 1B -0.0319554
RPS24 ribosomal protein S24 -0.0318888
ABLIM1 actin binding LIM protein 1 -0.0315959
UBE2B ubiquitin-conjugating enzyme E2B -0.0314606
GNAS GNAS complex locus -0.0312822
RPLP2 ribosomal protein, large, P2 -0.0311738
RACK1 receptor for activated C kinase 1 -0.0310487
RPL23 ribosomal protein L23 -0.031003
PATJ PATJ crumbs cell polarity complex component -0.0308959
S100A9 S100 calcium binding protein A9 -0.0306474
LAMB3 laminin, beta 3 -0.0305634
SERF2 small EDRK-rich factor 2 -0.030251
SEC31A SEC31 homolog A (S. cerevisiae) -0.029014
RPL36 ribosomal protein L36 -0.0288652
GNPDA1 glucosamine-6-phosphate deaminase 1 -0.0287041
PLEC plectin -0.0285788
KRT18 keratin 18, type I -0.0285497
RAB1A RAB1A, member RAS oncogene family -0.0284425
GM2A GM2 ganglioside activator -0.0283751